Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:70263158-70623177

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163 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ppp3cc 14 70217865 to 70289471 71606 - protein coding gene protein phosphatase 3, catalytic subunit, gamma isoform
Tssr129566 14 70279872 to 70279906 34 - TSS region transcription start site region 129566
Cpgi6689 14 70288852 to 70289940 1088 CpG island CpG island 6689
Tssr4469 14 70289405 to 70289412 7 - TSS region transcription start site region 4469
Tssr129567 14 70289416 to 70289429 13 - TSS region transcription start site region 129567
Tssr129568 14 70289430 to 70289509 79 - TSS region transcription start site region 129568
Tssr126409 14 70289530 to 70289585 55 + TSS region transcription start site region 126409
Tssr126410 14 70289588 to 70289595 7 + TSS region transcription start site region 126410
D14Mit217 14 70294641 to 70294761 120 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 217
Gm44340 14 70299922 to 70300007 85 - miRNA gene predicted gene, 44340
Gm4240 14 70302207 to 70302939 732 + pseudogene predicted gene 4240
Slc39a14 14 70303469 to 70351425 47956 - protein coding gene solute carrier family 39 (zinc transporter), member 14
Tssr129569 14 70316590 to 70316626 36 - TSS region transcription start site region 129569
Tssr129570 14 70318853 to 70318869 16 - TSS region transcription start site region 129570
Tssr129571 14 70323744 to 70323753 9 - TSS region transcription start site region 129571
Tssr129572 14 70323771 to 70323778 7 - TSS region transcription start site region 129572
Tssr129573 14 70323783 to 70323798 15 - TSS region transcription start site region 129573
Tssr129574 14 70331308 to 70331328 20 - TSS region transcription start site region 129574
Tssr129575 14 70331441 to 70331447 6 - TSS region transcription start site region 129575
Tssr129576 14 70331458 to 70331477 19 - TSS region transcription start site region 129576
Tssr129577 14 70331489 to 70331508 19 - TSS region transcription start site region 129577
Tssr129578 14 70331514 to 70331523 9 - TSS region transcription start site region 129578
Tssr129579 14 70348425 to 70348440 15 - TSS region transcription start site region 129579
Cpgi6690 14 70350688 to 70351788 1100 CpG island CpG island 6690
Tssr129580 14 70351314 to 70351330 16 - TSS region transcription start site region 129580
Tssr129581 14 70351354 to 70351435 81 - TSS region transcription start site region 129581
Tssr126411 14 70359988 to 70360024 36 + TSS region transcription start site region 126411
Gm9174 14 70360187 to 70360441 254 + pseudogene predicted pseudogene 9174
Piwil2 14 70372477 to 70429383 56906 - protein coding gene piwi-like RNA-mediated gene silencing 2
Gm22725 14 70422171 to 70422280 109 - snoRNA gene predicted gene, 22725
Gm24890 14 70428496 to 70428597 101 - snRNA gene predicted gene, 24890
Cpgi6691 14 70428942 to 70429261 319 CpG island CpG island 6691
Tssr129582 14 70429072 to 70429096 24 - TSS region transcription start site region 129582
Tssr129583 14 70429097 to 70429116 19 - TSS region transcription start site region 129583
Tssr129584 14 70429371 to 70429414 43 - TSS region transcription start site region 129584
Tssr126412 14 70432009 to 70432013 4 + TSS region transcription start site region 126412
Polr3d 14 70438757 to 70443447 4690 - protein coding gene polymerase (RNA) III (DNA directed) polypeptide D
Cpgi6692 14 70442829 to 70443969 1140 CpG island CpG island 6692
Tssr129585 14 70443126 to 70443153 27 - TSS region transcription start site region 129585
Tssr129586 14 70443158 to 70443177 19 - TSS region transcription start site region 129586
Tssr129587 14 70443219 to 70443238 19 - TSS region transcription start site region 129587
Tssr129588 14 70443396 to 70443407 11 - TSS region transcription start site region 129588
Tssr129589 14 70443413 to 70443436 23 - TSS region transcription start site region 129589
Tssr129590 14 70443442 to 70443476 34 - TSS region transcription start site region 129590
Mir320 14 70443510 to 70443591 81 + miRNA gene microRNA 320
Tssr126413 14 70443518 to 70443530 12 + TSS region transcription start site region 126413
Tssr126414 14 70456992 to 70457014 22 + TSS region transcription start site region 126414
Tssr126415 14 70457226 to 70457274 48 + TSS region transcription start site region 126415
Cpgi6693 14 70457385 to 70458036 651 CpG island CpG island 6693
Tssr126416 14 70457428 to 70457435 7 + TSS region transcription start site region 126416
Tssr126417 14 70457447 to 70457544 97 + TSS region transcription start site region 126417
Phyhip 14 70457517 to 70468826 11309 + protein coding gene phytanoyl-CoA hydroxylase interacting protein
Tssr126418 14 70457547 to 70457550 3 + TSS region transcription start site region 126418
Tssr126419 14 70457589 to 70457596 7 + TSS region transcription start site region 126419
Tssr126420 14 70457609 to 70457618 9 + TSS region transcription start site region 126420
Tssr126421 14 70461753 to 70461779 26 + TSS region transcription start site region 126421
Tssr126422 14 70462901 to 70462904 3 + TSS region transcription start site region 126422
Tssr126423 14 70466455 to 70466467 12 + TSS region transcription start site region 126423
Tssr126424 14 70466539 to 70466541 2 + TSS region transcription start site region 126424
Tssr126425 14 70466566 to 70466597 31 + TSS region transcription start site region 126425
Tssr4470 14 70466610 to 70466621 11 + TSS region transcription start site region 4470
Tssr126426 14 70466723 to 70466733 10 + TSS region transcription start site region 126426
Tssr126427 14 70466820 to 70466848 28 + TSS region transcription start site region 126427
Tssr126428 14 70466853 to 70466860 7 + TSS region transcription start site region 126428
Cpgi6694 14 70466866 to 70467285 419 CpG island CpG island 6694
Tssr126429 14 70467612 to 70467619 7 + TSS region transcription start site region 126429
Tssr126430 14 70467681 to 70467687 6 + TSS region transcription start site region 126430
Tssr126431 14 70467835 to 70467845 10 + TSS region transcription start site region 126431
Tssr126432 14 70467869 to 70467883 14 + TSS region transcription start site region 126432
Bmp1 14 70474558 to 70520234 45676 - protein coding gene bone morphogenetic protein 1
Tssr129591 14 70505477 to 70505481 4 - TSS region transcription start site region 129591
Cpgi6695 14 70508675 to 70508864 189 CpG island CpG island 6695
Cpgi6696 14 70519373 to 70520796 1423 CpG island CpG island 6696
Tssr129592 14 70520070 to 70520135 65 - TSS region transcription start site region 129592
Tssr129593 14 70520161 to 70520172 11 - TSS region transcription start site region 129593
Tssr129594 14 70520209 to 70520226 17 - TSS region transcription start site region 129594
Tssr129595 14 70520254 to 70520268 14 - TSS region transcription start site region 129595
Tssr129596 14 70520626 to 70520640 14 - TSS region transcription start site region 129596
Tssr129597 14 70520656 to 70520682 26 - TSS region transcription start site region 129597
Tssr126433 14 70520946 to 70520955 9 + TSS region transcription start site region 126433
Sftpc 14 70520949 to 70524081 3132 - protein coding gene surfactant associated protein C
Tssr129598 14 70520968 to 70520989 21 - TSS region transcription start site region 129598
Tssr129599 14 70521020 to 70521027 7 - TSS region transcription start site region 129599
Tssr126434 14 70521040 to 70521051 11 + TSS region transcription start site region 126434
Tssr126435 14 70521429 to 70521447 18 + TSS region transcription start site region 126435
Tssr129600 14 70521458 to 70521478 20 - TSS region transcription start site region 129600
Tssr126436 14 70521822 to 70521833 11 + TSS region transcription start site region 126436
Tssr129601 14 70521885 to 70521928 43 - TSS region transcription start site region 129601
Tssr126437 14 70522200 to 70522245 45 + TSS region transcription start site region 126437
Tssr129602 14 70522209 to 70522254 45 - TSS region transcription start site region 129602
Tssr129603 14 70522652 to 70522675 23 - TSS region transcription start site region 129603
Tssr129604 14 70522679 to 70522703 24 - TSS region transcription start site region 129604
Tssr129605 14 70522730 to 70522765 35 - TSS region transcription start site region 129605
Tssr129606 14 70522769 to 70522782 13 - TSS region transcription start site region 129606
D14Mit33 14 70523236 to 70523528 292 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 33
Tssr129607 14 70523385 to 70523405 20 - TSS region transcription start site region 129607
Tssr129608 14 70523433 to 70523444 11 - TSS region transcription start site region 129608
Tssr129609 14 70523453 to 70523462 9 - TSS region transcription start site region 129609
D14Mit32 14 70523856 to 70524089 233 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 32
Lbm10 14 70523856 to 70524089 233 QTL lean body mass 10
Tssr129610 14 70524068 to 70524084 16 - TSS region transcription start site region 129610
Tssr126438 14 70528505 to 70528546 41 + TSS region transcription start site region 126438
Cpgi6697 14 70530386 to 70531473 1087 CpG island CpG island 6697
Tssr126439 14 70530560 to 70530571 11 + TSS region transcription start site region 126439
Tssr126440 14 70530581 to 70530599 18 + TSS region transcription start site region 126440
Tssr126441 14 70530611 to 70530624 13 + TSS region transcription start site region 126441
Tssr126442 14 70530660 to 70530691 31 + TSS region transcription start site region 126442
Tssr126443 14 70530819 to 70530847 28 + TSS region transcription start site region 126443
Lgi3 14 70530821 to 70538324 7503 + protein coding gene leucine-rich repeat LGI family, member 3
Tssr126444 14 70530849 to 70530879 30 + TSS region transcription start site region 126444
Tssr126445 14 70530899 to 70530910 11 + TSS region transcription start site region 126445
Tssr126446 14 70530996 to 70531003 7 + TSS region transcription start site region 126446
Tssr126447 14 70531620 to 70531630 10 + TSS region transcription start site region 126447
Tssr126448 14 70531652 to 70531673 21 + TSS region transcription start site region 126448
Tssr126449 14 70531677 to 70531693 16 + TSS region transcription start site region 126449
Tssr126450 14 70531701 to 70531712 11 + TSS region transcription start site region 126450
Tssr126451 14 70534409 to 70534421 12 + TSS region transcription start site region 126451
Tssr129611 14 70536084 to 70536128 44 - TSS region transcription start site region 129611
Tssr126452 14 70536204 to 70536228 24 + TSS region transcription start site region 126452
Cpgi6698 14 70536318 to 70536821 503 CpG island CpG island 6698
Tssr129612 14 70540776 to 70540787 11 - TSS region transcription start site region 129612
Tssr126453 14 70544630 to 70544665 35 + TSS region transcription start site region 126453
Cpgi6699 14 70545085 to 70545733 648 CpG island CpG island 6699
Tssr126454 14 70545219 to 70545236 17 + TSS region transcription start site region 126454
Reep4 14 70545251 to 70548933 3682 + protein coding gene receptor accessory protein 4
Tssr126455 14 70545261 to 70545269 8 + TSS region transcription start site region 126455
Tssr126456 14 70545283 to 70545340 57 + TSS region transcription start site region 126456
Tssr126457 14 70545348 to 70545359 11 + TSS region transcription start site region 126457
Tssr126458 14 70545385 to 70545394 9 + TSS region transcription start site region 126458
Tssr126459 14 70545440 to 70545457 17 + TSS region transcription start site region 126459
Tssr126460 14 70546475 to 70546486 11 + TSS region transcription start site region 126460
Tssr126461 14 70552190 to 70552230 40 + TSS region transcription start site region 126461
Tssr126462 14 70552239 to 70552252 13 + TSS region transcription start site region 126462
Tssr126463 14 70552255 to 70552264 9 + TSS region transcription start site region 126463
Cpgi6700 14 70554040 to 70555542 1502 CpG island CpG island 6700
Hr 14 70554056 to 70573548 19492 + protein coding gene lysine demethylase and nuclear receptor corepressor
Tssr126464 14 70554228 to 70554239 11 + TSS region transcription start site region 126464
Tssr126465 14 70554393 to 70554402 9 + TSS region transcription start site region 126465
Tssr126466 14 70554498 to 70554503 5 + TSS region transcription start site region 126466
Tssr126467 14 70554523 to 70554528 5 + TSS region transcription start site region 126467
Tssr126468 14 70554542 to 70554560 18 + TSS region transcription start site region 126468
Tssr126469 14 70563473 to 70563507 34 + TSS region transcription start site region 126469
Tssr126470 14 70571122 to 70571130 8 + TSS region transcription start site region 126470
Tssr126471 14 70573843 to 70573847 4 + TSS region transcription start site region 126471
Cpgi6701 14 70577375 to 70578409 1034 CpG island CpG island 6701
Tssr126472 14 70577810 to 70577838 28 + TSS region transcription start site region 126472
Nudt18 14 70577837 to 70582571 4734 + protein coding gene nudix (nucleoside diphosphate linked moiety X)-type motif 18
Tssr126473 14 70577839 to 70577891 52 + TSS region transcription start site region 126473
Fam160b2 14 70583296 to 70599835 16539 - protein coding gene family with sequence similarity 160, member B2
Cpgi6702 14 70599088 to 70600066 978 CpG island CpG island 6702
B930095I24Rik 14 70599414 to 70600261 847 protein coding gene RIKEN cDNA B930095I24Rik gene
Tssr4471 14 70599558 to 70599569 11 - TSS region transcription start site region 4471
Tssr129613 14 70599801 to 70599812 11 - TSS region transcription start site region 129613
Tssr129614 14 70599813 to 70599831 18 - TSS region transcription start site region 129614
Tssr129615 14 70599832 to 70599887 55 - TSS region transcription start site region 129615
Dmtn 14 70602184 to 70636048 33864 - protein coding gene dematin actin binding protein
Cpgi6703 14 70604504 to 70604859 355 CpG island CpG island 6703
Tssr129616 14 70617714 to 70617719 5 - TSS region transcription start site region 129616
Cpgi6704 14 70617930 to 70618631 701 CpG island CpG island 6704
Tssr129617 14 70618540 to 70618574 34 - TSS region transcription start site region 129617
Tssr129618 14 70618631 to 70618641 10 - TSS region transcription start site region 129618
Tssr126474 14 70619127 to 70619159 32 + TSS region transcription start site region 126474
Tssr129619 14 70619970 to 70619971 1 - TSS region transcription start site region 129619