Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:70219988-70500024

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74 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm49417 14 70205324 to 70255287 49963 + antisense lncRNA gene predicted gene, 49417
Ppp3cc 14 70217865 to 70289471 71606 - protein coding gene protein phosphatase 3, catalytic subunit, gamma isoform
Gm49288 14 70237285 to 70237569 284 - pseudogene predicted gene, 49288
Tssr126408 14 70242446 to 70242460 14 + TSS region transcription start site region 126408
Gm33790 14 70248659 to 70255744 7085 + lncRNA gene predicted gene, 33790
Tssr129566 14 70279872 to 70279906 34 - TSS region transcription start site region 129566
Cpgi6689 14 70288852 to 70289940 1088 CpG island CpG island 6689
Tssr4469 14 70289405 to 70289412 7 - TSS region transcription start site region 4469
Tssr129567 14 70289416 to 70289429 13 - TSS region transcription start site region 129567
Tssr129568 14 70289430 to 70289509 79 - TSS region transcription start site region 129568
Tssr126409 14 70289530 to 70289585 55 + TSS region transcription start site region 126409
Tssr126410 14 70289588 to 70289595 7 + TSS region transcription start site region 126410
D14Mit217 14 70294641 to 70294761 120 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 217
Gm44340 14 70299922 to 70300007 85 - miRNA gene predicted gene, 44340
Gm4240 14 70302207 to 70302939 732 + pseudogene predicted gene 4240
Slc39a14 14 70303469 to 70351425 47956 - protein coding gene solute carrier family 39 (zinc transporter), member 14
Tssr129569 14 70316590 to 70316626 36 - TSS region transcription start site region 129569
Tssr129570 14 70318853 to 70318869 16 - TSS region transcription start site region 129570
Tssr129571 14 70323744 to 70323753 9 - TSS region transcription start site region 129571
Tssr129572 14 70323771 to 70323778 7 - TSS region transcription start site region 129572
Tssr129573 14 70323783 to 70323798 15 - TSS region transcription start site region 129573
Tssr129574 14 70331308 to 70331328 20 - TSS region transcription start site region 129574
Tssr129575 14 70331441 to 70331447 6 - TSS region transcription start site region 129575
Tssr129576 14 70331458 to 70331477 19 - TSS region transcription start site region 129576
Tssr129577 14 70331489 to 70331508 19 - TSS region transcription start site region 129577
Tssr129578 14 70331514 to 70331523 9 - TSS region transcription start site region 129578
Tssr129579 14 70348425 to 70348440 15 - TSS region transcription start site region 129579
Cpgi6690 14 70350688 to 70351788 1100 CpG island CpG island 6690
Tssr129580 14 70351314 to 70351330 16 - TSS region transcription start site region 129580
Tssr129581 14 70351354 to 70351435 81 - TSS region transcription start site region 129581
Tssr126411 14 70359988 to 70360024 36 + TSS region transcription start site region 126411
Gm9174 14 70360187 to 70360441 254 + pseudogene predicted pseudogene 9174
Piwil2 14 70372477 to 70429383 56906 - protein coding gene piwi-like RNA-mediated gene silencing 2
Gm22725 14 70422171 to 70422280 109 - snoRNA gene predicted gene, 22725
Gm24890 14 70428496 to 70428597 101 - snRNA gene predicted gene, 24890
Cpgi6691 14 70428942 to 70429261 319 CpG island CpG island 6691
Tssr129582 14 70429072 to 70429096 24 - TSS region transcription start site region 129582
Tssr129583 14 70429097 to 70429116 19 - TSS region transcription start site region 129583
Tssr129584 14 70429371 to 70429414 43 - TSS region transcription start site region 129584
Tssr126412 14 70432009 to 70432013 4 + TSS region transcription start site region 126412
Polr3d 14 70438757 to 70443447 4690 - protein coding gene polymerase (RNA) III (DNA directed) polypeptide D
Cpgi6692 14 70442829 to 70443969 1140 CpG island CpG island 6692
Tssr129585 14 70443126 to 70443153 27 - TSS region transcription start site region 129585
Tssr129586 14 70443158 to 70443177 19 - TSS region transcription start site region 129586
Tssr129587 14 70443219 to 70443238 19 - TSS region transcription start site region 129587
Tssr129588 14 70443396 to 70443407 11 - TSS region transcription start site region 129588
Tssr129589 14 70443413 to 70443436 23 - TSS region transcription start site region 129589
Tssr129590 14 70443442 to 70443476 34 - TSS region transcription start site region 129590
Mir320 14 70443510 to 70443591 81 + miRNA gene microRNA 320
Tssr126413 14 70443518 to 70443530 12 + TSS region transcription start site region 126413
Tssr126414 14 70456992 to 70457014 22 + TSS region transcription start site region 126414
Tssr126415 14 70457226 to 70457274 48 + TSS region transcription start site region 126415
Cpgi6693 14 70457385 to 70458036 651 CpG island CpG island 6693
Tssr126416 14 70457428 to 70457435 7 + TSS region transcription start site region 126416
Tssr126417 14 70457447 to 70457544 97 + TSS region transcription start site region 126417
Phyhip 14 70457517 to 70468826 11309 + protein coding gene phytanoyl-CoA hydroxylase interacting protein
Tssr126418 14 70457547 to 70457550 3 + TSS region transcription start site region 126418
Tssr126419 14 70457589 to 70457596 7 + TSS region transcription start site region 126419
Tssr126420 14 70457609 to 70457618 9 + TSS region transcription start site region 126420
Tssr126421 14 70461753 to 70461779 26 + TSS region transcription start site region 126421
Tssr126422 14 70462901 to 70462904 3 + TSS region transcription start site region 126422
Tssr126423 14 70466455 to 70466467 12 + TSS region transcription start site region 126423
Tssr126424 14 70466539 to 70466541 2 + TSS region transcription start site region 126424
Tssr126425 14 70466566 to 70466597 31 + TSS region transcription start site region 126425
Tssr4470 14 70466610 to 70466621 11 + TSS region transcription start site region 4470
Tssr126426 14 70466723 to 70466733 10 + TSS region transcription start site region 126426
Tssr126427 14 70466820 to 70466848 28 + TSS region transcription start site region 126427
Tssr126428 14 70466853 to 70466860 7 + TSS region transcription start site region 126428
Cpgi6694 14 70466866 to 70467285 419 CpG island CpG island 6694
Tssr126429 14 70467612 to 70467619 7 + TSS region transcription start site region 126429
Tssr126430 14 70467681 to 70467687 6 + TSS region transcription start site region 126430
Tssr126431 14 70467835 to 70467845 10 + TSS region transcription start site region 126431
Tssr126432 14 70467869 to 70467883 14 + TSS region transcription start site region 126432
Bmp1 14 70474558 to 70520234 45676 - protein coding gene bone morphogenetic protein 1