Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:70109416-70209430

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71 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bin3 14 70100105 to 70138206 38101 + protein coding gene bridging integrator 3
Tssr126400 14 70130123 to 70130130 7 + TSS region transcription start site region 126400
Ccar2 14 70138168 to 70153814 15646 - protein coding gene cell cycle activator and apoptosis regulator 2
Tssr4468 14 70145965 to 70145966 1 - TSS region transcription start site region 4468
Tssr129512 14 70151297 to 70151341 44 - TSS region transcription start site region 129512
Tssr129513 14 70152431 to 70152462 31 - TSS region transcription start site region 129513
Tssr129514 14 70152747 to 70152757 10 - TSS region transcription start site region 129514
Cpgi6683 14 70153173 to 70154021 848 CpG island CpG island 6683
Tssr129515 14 70153203 to 70153206 3 - TSS region transcription start site region 129515
Tssr129516 14 70153385 to 70153464 79 - TSS region transcription start site region 129516
Tssr129517 14 70153651 to 70153678 27 - TSS region transcription start site region 129517
Tssr129518 14 70153685 to 70153733 48 - TSS region transcription start site region 129518
Tssr129519 14 70153817 to 70153846 29 - TSS region transcription start site region 129519
9930012K11Rik 14 70154405 to 70159502 5097 - protein coding gene RIKEN cDNA 9930012K11 gene
Cpgi6684 14 70158957 to 70159855 898 CpG island CpG island 6684
Tssr126401 14 70159315 to 70159320 5 + TSS region transcription start site region 126401
Tssr129520 14 70159416 to 70159430 14 - TSS region transcription start site region 129520
Tssr129521 14 70159433 to 70159483 50 - TSS region transcription start site region 129521
Tssr126402 14 70159571 to 70159576 5 + TSS region transcription start site region 126402
Pdlim2 14 70164218 to 70177681 13463 - protein coding gene PDZ and LIM domain 2
Tssr129522 14 70167992 to 70168004 12 - TSS region transcription start site region 129522
Tssr129523 14 70168011 to 70168020 9 - TSS region transcription start site region 129523
Tssr129524 14 70168021 to 70168061 40 - TSS region transcription start site region 129524
Tssr129525 14 70173907 to 70173910 3 - TSS region transcription start site region 129525
Tssr129526 14 70175306 to 70175329 23 - TSS region transcription start site region 129526
Tssr129527 14 70175356 to 70175395 39 - TSS region transcription start site region 129527
Tssr129528 14 70175397 to 70175443 46 - TSS region transcription start site region 129528
Cpgi6685 14 70176279 to 70177289 1010 CpG island CpG island 6685
Tssr129529 14 70176787 to 70176824 37 - TSS region transcription start site region 129529
Tssr129530 14 70177668 to 70177696 28 - TSS region transcription start site region 129530
Tssr129531 14 70177729 to 70177747 18 - TSS region transcription start site region 129531
Sorbs3 14 70180468 to 70211989 31521 - protein coding gene sorbin and SH3 domain containing 3
Cpgi6686 14 70181123 to 70181382 259 CpG island CpG island 6686
Tssr129532 14 70184867 to 70184899 32 - TSS region transcription start site region 129532
Tssr129533 14 70185053 to 70185066 13 - TSS region transcription start site region 129533
Tssr129534 14 70189566 to 70189569 3 - TSS region transcription start site region 129534
Tssr129535 14 70190770 to 70190774 4 - TSS region transcription start site region 129535
Tssr129536 14 70191465 to 70191471 6 - TSS region transcription start site region 129536
Tssr129537 14 70191508 to 70191538 30 - TSS region transcription start site region 129537
Tssr129538 14 70191564 to 70191584 20 - TSS region transcription start site region 129538
Cpgi6687 14 70191645 to 70192456 811 CpG island CpG island 6687
Tssr129539 14 70191903 to 70191941 38 - TSS region transcription start site region 129539
Tssr129540 14 70192140 to 70192274 134 - TSS region transcription start site region 129540
Tssr129541 14 70192664 to 70192712 48 - TSS region transcription start site region 129541
Tssr129542 14 70192718 to 70192738 20 - TSS region transcription start site region 129542
Tssr129543 14 70192779 to 70192786 7 - TSS region transcription start site region 129543
Tssr129544 14 70192819 to 70192831 12 - TSS region transcription start site region 129544
Tssr129545 14 70192866 to 70192892 26 - TSS region transcription start site region 129545
Tssr129546 14 70195985 to 70195996 11 - TSS region transcription start site region 129546
Tssr129547 14 70195997 to 70196009 12 - TSS region transcription start site region 129547
Tssr129548 14 70196027 to 70196034 7 - TSS region transcription start site region 129548
Tssr129549 14 70196045 to 70196099 54 - TSS region transcription start site region 129549
Tssr126403 14 70203394 to 70203407 13 + TSS region transcription start site region 126403
Tssr129550 14 70203408 to 70203453 45 - TSS region transcription start site region 129550
Gm26908 14 70203419 to 70217056 13637 + lncRNA gene predicted gene, 26908
Tssr129551 14 70203455 to 70203466 11 - TSS region transcription start site region 129551
Tssr129552 14 70203467 to 70203480 13 - TSS region transcription start site region 129552
Tssr126404 14 70205171 to 70205180 9 + TSS region transcription start site region 126404
Tssr126405 14 70205225 to 70205237 12 + TSS region transcription start site region 126405
Tssr126406 14 70205244 to 70205255 11 + TSS region transcription start site region 126406
Gm49417 14 70205324 to 70255287 49963 + antisense lncRNA gene predicted gene, 49417
Cpgi6688 14 70205627 to 70206537 910 CpG island CpG island 6688
Tssr129553 14 70205826 to 70205871 45 - TSS region transcription start site region 129553
Tssr129554 14 70205873 to 70205886 13 - TSS region transcription start site region 129554
Tssr129555 14 70205985 to 70205997 12 - TSS region transcription start site region 129555
Tssr129556 14 70206038 to 70206060 22 - TSS region transcription start site region 129556
Tssr129557 14 70206082 to 70206101 19 - TSS region transcription start site region 129557
Tssr129558 14 70206111 to 70206129 18 - TSS region transcription start site region 129558
Tssr129559 14 70207640 to 70207675 35 - TSS region transcription start site region 129559
Tssr126407 14 70207726 to 70207761 35 + TSS region transcription start site region 126407
Tssr129560 14 70208293 to 70208314 21 - TSS region transcription start site region 129560