Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:69680154-70470167

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229 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Loxl2 14 69609068 to 69695834 86766 + protein coding gene lysyl oxidase-like 2
Tssr164719 14 69682275 to 69682298 23 + TSS region transcription start site region 164719
Tssr164731 14 69687816 to 69687839 23 - TSS region transcription start site region 164731
Tssr129488 14 69688569 to 69688579 10 - TSS region transcription start site region 129488
Mir6950 14 69692248 to 69692320 72 + miRNA gene microRNA 6950
Tssr126374 14 69695424 to 69695430 6 + TSS region transcription start site region 126374
R3hcc1 14 69697307 to 69707584 10277 - protein coding gene R3H domain and coiled-coil containing 1
Tssr129489 14 69705497 to 69705508 11 - TSS region transcription start site region 129489
Cpgi6674 14 69707057 to 69707679 622 CpG island CpG island 6674
Tssr129490 14 69707507 to 69707543 36 - TSS region transcription start site region 129490
Tssr129491 14 69707546 to 69707567 21 - TSS region transcription start site region 129491
Tssr129492 14 69707573 to 69707614 41 - TSS region transcription start site region 129492
Tssr129493 14 69714807 to 69714836 29 - TSS region transcription start site region 129493
Tssr129494 14 69716644 to 69716656 12 - TSS region transcription start site region 129494
Chmp7 14 69717000 to 69732541 15541 - protein coding gene charged multivesicular body protein 7
Tssr129495 14 69724769 to 69724774 5 - TSS region transcription start site region 129495
Gm18682 14 69726485 to 69728243 1758 + pseudogene predicted gene, 18682
Cpgi6675 14 69732044 to 69732915 871 CpG island CpG island 6675
Tssr129496 14 69732510 to 69732581 71 - TSS region transcription start site region 129496
4930480K23Rik 14 69732784 to 69767113 34329 + lincRNA gene RIKEN cDNA 4930480K23 gene
Gm17740 14 69761171 to 69763538 2367 - pseudogene predicted gene, 17740
Cpgi6676 14 69767433 to 69767893 460 CpG island CpG island 6676
Tssr126375 14 69767470 to 69767526 56 + TSS region transcription start site region 126375
Tnfrsf10b 14 69767472 to 69784411 16939 + protein coding gene tumor necrosis factor receptor superfamily, member 10b
Tssr126376 14 69767542 to 69767553 11 + TSS region transcription start site region 126376
Tssr126377 14 69775108 to 69775119 11 + TSS region transcription start site region 126377
Tssr126378 14 69775157 to 69775193 36 + TSS region transcription start site region 126378
Tssr126379 14 69780619 to 69780630 11 + TSS region transcription start site region 126379
Rhobtb2 14 69784990 to 69805636 20646 - protein coding gene Rho-related BTB domain containing 2
Tssr129497 14 69787118 to 69787120 2 - TSS region transcription start site region 129497
Tssr129498 14 69804114 to 69804142 28 - TSS region transcription start site region 129498
Cpgi6677 14 69804884 to 69805934 1050 CpG island CpG island 6677
Tssr129499 14 69805218 to 69805292 74 - TSS region transcription start site region 129499
Tssr129500 14 69805444 to 69805458 14 - TSS region transcription start site region 129500
Tssr129501 14 69805465 to 69805504 39 - TSS region transcription start site region 129501
Tssr129502 14 69805524 to 69805552 28 - TSS region transcription start site region 129502
Tssr129503 14 69805563 to 69805578 15 - TSS region transcription start site region 129503
Tssr129504 14 69805630 to 69805668 38 - TSS region transcription start site region 129504
Tssr126380 14 69807794 to 69807819 25 + TSS region transcription start site region 126380
Gm46461 14 69811941 to 69825126 13185 - lncRNA gene predicted gene, 46461
Tssr129505 14 69815908 to 69815921 13 - TSS region transcription start site region 129505
Tssr129506 14 69816008 to 69816034 26 - TSS region transcription start site region 129506
Tssr129507 14 69824848 to 69824859 11 - TSS region transcription start site region 129507
Tssr129508 14 69824918 to 69824938 20 - TSS region transcription start site region 129508
Tssr129509 14 69827929 to 69827964 35 - TSS region transcription start site region 129509
Tssr126381 14 69840359 to 69840378 19 + TSS region transcription start site region 126381
Tssr4467 14 69840387 to 69840391 4 + TSS region transcription start site region 4467
Tssr126382 14 69840393 to 69840465 72 + TSS region transcription start site region 126382
Pebp4 14 69840420 to 70059918 219498 + protein coding gene phosphatidylethanolamine binding protein 4
Tssr126383 14 69840466 to 69840477 11 + TSS region transcription start site region 126383
Tssr126384 14 69840478 to 69840481 3 + TSS region transcription start site region 126384
Cpgi6678 14 69861451 to 69861774 323 CpG island CpG island 6678
Gm19017 14 69864070 to 69864809 739 - pseudogene predicted gene, 19017
D14Mit237 14 69946226 to 69946346 120 DNA segment DNA Segment, Chr 14, Massachusetts Institute of Technology 237
Gm9148 14 69953458 to 69953969 511 + pseudogene predicted gene 9148
Gm41198 14 69974258 to 69995327 21069 - lncRNA gene predicted gene, 41198
Gm33524 14 70018231 to 70057367 39136 - antisense lncRNA gene predicted gene, 33524
D14Mit236 14 70026770 to 70026886 116 DNA segment DNA Segment, Chr 14, Massachusetts Institute of Technology 236
Tssr129510 14 70056970 to 70057015 45 - TSS region transcription start site region 129510
Cpgi6679 14 70067671 to 70067911 240 CpG island CpG island 6679
Tssr129511 14 70069126 to 70069129 3 - TSS region transcription start site region 129511
Cpgi6680 14 70074518 to 70076200 1682 CpG island CpG island 6680
Tssr126385 14 70075154 to 70075167 13 + TSS region transcription start site region 126385
Tssr126386 14 70075190 to 70075199 9 + TSS region transcription start site region 126386
Cpgi6681 14 70076612 to 70080708 4096 CpG island CpG island 6681
Tssr126387 14 70076907 to 70076923 16 + TSS region transcription start site region 126387
Tssr126388 14 70076926 to 70076935 9 + TSS region transcription start site region 126388
Tssr126389 14 70077168 to 70077190 22 + TSS region transcription start site region 126389
Tssr126390 14 70077206 to 70077222 16 + TSS region transcription start site region 126390
Tssr126391 14 70077306 to 70077366 60 + TSS region transcription start site region 126391
Tssr126392 14 70077375 to 70077384 9 + TSS region transcription start site region 126392
Egr3 14 70077445 to 70082613 5168 + protein coding gene early growth response 3
Tssr126393 14 70078009 to 70078045 36 + TSS region transcription start site region 126393
Tssr126394 14 70079241 to 70079264 23 + TSS region transcription start site region 126394
Tssr126395 14 70079395 to 70079407 12 + TSS region transcription start site region 126395
Tssr126396 14 70080148 to 70080163 15 + TSS region transcription start site region 126396
Tssr126397 14 70081155 to 70081162 7 + TSS region transcription start site region 126397
Gm41199 14 70083405 to 70093377 9972 + lncRNA gene predicted gene, 41199
Cpgi6682 14 70099797 to 70100511 714 CpG island CpG island 6682
Tssr126398 14 70100083 to 70100144 61 + TSS region transcription start site region 126398
Bin3 14 70100105 to 70138206 38101 + protein coding gene bridging integrator 3
Tssr126399 14 70100162 to 70100179 17 + TSS region transcription start site region 126399
Tssr126400 14 70130123 to 70130130 7 + TSS region transcription start site region 126400
Ccar2 14 70138168 to 70153814 15646 - protein coding gene cell cycle activator and apoptosis regulator 2
Tssr4468 14 70145965 to 70145966 1 - TSS region transcription start site region 4468
Tssr129512 14 70151297 to 70151341 44 - TSS region transcription start site region 129512
Tssr129513 14 70152431 to 70152462 31 - TSS region transcription start site region 129513
Tssr129514 14 70152747 to 70152757 10 - TSS region transcription start site region 129514
Cpgi6683 14 70153173 to 70154021 848 CpG island CpG island 6683
Tssr129515 14 70153203 to 70153206 3 - TSS region transcription start site region 129515
Tssr129516 14 70153385 to 70153464 79 - TSS region transcription start site region 129516
Tssr129517 14 70153651 to 70153678 27 - TSS region transcription start site region 129517
Tssr129518 14 70153685 to 70153733 48 - TSS region transcription start site region 129518
Tssr129519 14 70153817 to 70153846 29 - TSS region transcription start site region 129519
9930012K11Rik 14 70154405 to 70159502 5097 - protein coding gene RIKEN cDNA 9930012K11 gene
Cpgi6684 14 70158957 to 70159855 898 CpG island CpG island 6684
Tssr126401 14 70159315 to 70159320 5 + TSS region transcription start site region 126401
Tssr129520 14 70159416 to 70159430 14 - TSS region transcription start site region 129520
Tssr129521 14 70159433 to 70159483 50 - TSS region transcription start site region 129521
Tssr126402 14 70159571 to 70159576 5 + TSS region transcription start site region 126402
Pdlim2 14 70164218 to 70177681 13463 - protein coding gene PDZ and LIM domain 2
Tssr129522 14 70167992 to 70168004 12 - TSS region transcription start site region 129522
Tssr129523 14 70168011 to 70168020 9 - TSS region transcription start site region 129523
Tssr129524 14 70168021 to 70168061 40 - TSS region transcription start site region 129524
Tssr129525 14 70173907 to 70173910 3 - TSS region transcription start site region 129525
Tssr129526 14 70175306 to 70175329 23 - TSS region transcription start site region 129526
Tssr129527 14 70175356 to 70175395 39 - TSS region transcription start site region 129527
Tssr129528 14 70175397 to 70175443 46 - TSS region transcription start site region 129528
Cpgi6685 14 70176279 to 70177289 1010 CpG island CpG island 6685
Tssr129529 14 70176787 to 70176824 37 - TSS region transcription start site region 129529
Tssr129530 14 70177668 to 70177696 28 - TSS region transcription start site region 129530
Tssr129531 14 70177729 to 70177747 18 - TSS region transcription start site region 129531
Sorbs3 14 70180468 to 70211989 31521 - protein coding gene sorbin and SH3 domain containing 3
Cpgi6686 14 70181123 to 70181382 259 CpG island CpG island 6686
Tssr129532 14 70184867 to 70184899 32 - TSS region transcription start site region 129532
Tssr129533 14 70185053 to 70185066 13 - TSS region transcription start site region 129533
Tssr129534 14 70189566 to 70189569 3 - TSS region transcription start site region 129534
Tssr129535 14 70190770 to 70190774 4 - TSS region transcription start site region 129535
Tssr129536 14 70191465 to 70191471 6 - TSS region transcription start site region 129536
Tssr129537 14 70191508 to 70191538 30 - TSS region transcription start site region 129537
Tssr129538 14 70191564 to 70191584 20 - TSS region transcription start site region 129538
Cpgi6687 14 70191645 to 70192456 811 CpG island CpG island 6687
Tssr129539 14 70191903 to 70191941 38 - TSS region transcription start site region 129539
Tssr129540 14 70192140 to 70192274 134 - TSS region transcription start site region 129540
Tssr129541 14 70192664 to 70192712 48 - TSS region transcription start site region 129541
Tssr129542 14 70192718 to 70192738 20 - TSS region transcription start site region 129542
Tssr129543 14 70192779 to 70192786 7 - TSS region transcription start site region 129543
Tssr129544 14 70192819 to 70192831 12 - TSS region transcription start site region 129544
Tssr129545 14 70192866 to 70192892 26 - TSS region transcription start site region 129545
Tssr129546 14 70195985 to 70195996 11 - TSS region transcription start site region 129546
Tssr129547 14 70195997 to 70196009 12 - TSS region transcription start site region 129547
Tssr129548 14 70196027 to 70196034 7 - TSS region transcription start site region 129548
Tssr129549 14 70196045 to 70196099 54 - TSS region transcription start site region 129549
Tssr126403 14 70203394 to 70203407 13 + TSS region transcription start site region 126403
Tssr129550 14 70203408 to 70203453 45 - TSS region transcription start site region 129550
Gm26908 14 70203419 to 70217056 13637 + lncRNA gene predicted gene, 26908
Tssr129551 14 70203455 to 70203466 11 - TSS region transcription start site region 129551
Tssr129552 14 70203467 to 70203480 13 - TSS region transcription start site region 129552
Tssr126404 14 70205171 to 70205180 9 + TSS region transcription start site region 126404
Tssr126405 14 70205225 to 70205237 12 + TSS region transcription start site region 126405
Tssr126406 14 70205244 to 70205255 11 + TSS region transcription start site region 126406
Gm49417 14 70205324 to 70255287 49963 + antisense lncRNA gene predicted gene, 49417
Cpgi6688 14 70205627 to 70206537 910 CpG island CpG island 6688
Tssr129553 14 70205826 to 70205871 45 - TSS region transcription start site region 129553
Tssr129554 14 70205873 to 70205886 13 - TSS region transcription start site region 129554
Tssr129555 14 70205985 to 70205997 12 - TSS region transcription start site region 129555
Tssr129556 14 70206038 to 70206060 22 - TSS region transcription start site region 129556
Tssr129557 14 70206082 to 70206101 19 - TSS region transcription start site region 129557
Tssr129558 14 70206111 to 70206129 18 - TSS region transcription start site region 129558
Tssr129559 14 70207640 to 70207675 35 - TSS region transcription start site region 129559
Tssr126407 14 70207726 to 70207761 35 + TSS region transcription start site region 126407
Tssr129560 14 70208293 to 70208314 21 - TSS region transcription start site region 129560
Tssr129561 14 70211882 to 70211890 8 - TSS region transcription start site region 129561
Tssr129562 14 70211893 to 70211921 28 - TSS region transcription start site region 129562
Tssr129563 14 70212019 to 70212049 30 - TSS region transcription start site region 129563
Tssr129564 14 70212409 to 70212416 7 - TSS region transcription start site region 129564
Tssr129565 14 70212425 to 70212436 11 - TSS region transcription start site region 129565
Ppp3cc 14 70217865 to 70289471 71606 - protein coding gene protein phosphatase 3, catalytic subunit, gamma isoform
Gm49288 14 70237285 to 70237569 284 - pseudogene predicted gene, 49288
Tssr126408 14 70242446 to 70242460 14 + TSS region transcription start site region 126408
Gm33790 14 70248659 to 70255744 7085 + lncRNA gene predicted gene, 33790
Tssr129566 14 70279872 to 70279906 34 - TSS region transcription start site region 129566
Cpgi6689 14 70288852 to 70289940 1088 CpG island CpG island 6689
Tssr4469 14 70289405 to 70289412 7 - TSS region transcription start site region 4469
Tssr129567 14 70289416 to 70289429 13 - TSS region transcription start site region 129567
Tssr129568 14 70289430 to 70289509 79 - TSS region transcription start site region 129568
Tssr126409 14 70289530 to 70289585 55 + TSS region transcription start site region 126409
Tssr126410 14 70289588 to 70289595 7 + TSS region transcription start site region 126410
D14Mit217 14 70294641 to 70294761 120 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 217
Gm44340 14 70299922 to 70300007 85 - miRNA gene predicted gene, 44340
Gm4240 14 70302207 to 70302939 732 + pseudogene predicted gene 4240
Slc39a14 14 70303469 to 70351425 47956 - protein coding gene solute carrier family 39 (zinc transporter), member 14
Tssr129569 14 70316590 to 70316626 36 - TSS region transcription start site region 129569
Tssr129570 14 70318853 to 70318869 16 - TSS region transcription start site region 129570
Tssr129571 14 70323744 to 70323753 9 - TSS region transcription start site region 129571
Tssr129572 14 70323771 to 70323778 7 - TSS region transcription start site region 129572
Tssr129573 14 70323783 to 70323798 15 - TSS region transcription start site region 129573
Tssr129574 14 70331308 to 70331328 20 - TSS region transcription start site region 129574
Tssr129575 14 70331441 to 70331447 6 - TSS region transcription start site region 129575
Tssr129576 14 70331458 to 70331477 19 - TSS region transcription start site region 129576
Tssr129577 14 70331489 to 70331508 19 - TSS region transcription start site region 129577
Tssr129578 14 70331514 to 70331523 9 - TSS region transcription start site region 129578
Tssr129579 14 70348425 to 70348440 15 - TSS region transcription start site region 129579
Cpgi6690 14 70350688 to 70351788 1100 CpG island CpG island 6690
Tssr129580 14 70351314 to 70351330 16 - TSS region transcription start site region 129580
Tssr129581 14 70351354 to 70351435 81 - TSS region transcription start site region 129581
Tssr126411 14 70359988 to 70360024 36 + TSS region transcription start site region 126411
Gm9174 14 70360187 to 70360441 254 + pseudogene predicted pseudogene 9174
Piwil2 14 70372477 to 70429383 56906 - protein coding gene piwi-like RNA-mediated gene silencing 2
Gm22725 14 70422171 to 70422280 109 - snoRNA gene predicted gene, 22725
Gm24890 14 70428496 to 70428597 101 - snRNA gene predicted gene, 24890
Cpgi6691 14 70428942 to 70429261 319 CpG island CpG island 6691
Tssr129582 14 70429072 to 70429096 24 - TSS region transcription start site region 129582
Tssr129583 14 70429097 to 70429116 19 - TSS region transcription start site region 129583
Tssr129584 14 70429371 to 70429414 43 - TSS region transcription start site region 129584
Tssr126412 14 70432009 to 70432013 4 + TSS region transcription start site region 126412
Polr3d 14 70438757 to 70443447 4690 - protein coding gene polymerase (RNA) III (DNA directed) polypeptide D
Cpgi6692 14 70442829 to 70443969 1140 CpG island CpG island 6692
Tssr129585 14 70443126 to 70443153 27 - TSS region transcription start site region 129585
Tssr129586 14 70443158 to 70443177 19 - TSS region transcription start site region 129586