Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:69110177-69460845

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57 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr126366 14 69158580 to 69158587 7 + TSS region transcription start site region 126366
Rps2-ps5 14 69158671 to 69159519 848 + pseudogene ribosomal protein S2, pseudogene 5
1700092C10Rik 14 69164799 to 69171843 7044 - antisense lncRNA gene RIKEN cDNA 1700092C10 gene
Cpgi6668 14 69171618 to 69171970 352 CpG island CpG island 6668
Tssr129443 14 69171800 to 69171823 23 - TSS region transcription start site region 129443
Nkx2-6 14 69171802 to 69175518 3716 + protein coding gene NK2 homeobox 6
Tssr129444 14 69171827 to 69171837 10 - TSS region transcription start site region 129444
Tssr129445 14 69171852 to 69171861 9 - TSS region transcription start site region 129445
Tssr126367 14 69171939 to 69171964 25 + TSS region transcription start site region 126367
Tssr126368 14 69171978 to 69171993 15 + TSS region transcription start site region 126368
Tssr126369 14 69172008 to 69172013 5 + TSS region transcription start site region 126369
Cpgi6669 14 69174476 to 69175387 911 CpG island CpG island 6669
Gm31632 14 69184898 to 69186064 1166 - lncRNA gene predicted gene, 31632
Cpgi6670 14 69190318 to 69191203 885 CpG island CpG island 6670
Tssr126370 14 69190668 to 69190691 23 + TSS region transcription start site region 126370
Nkx3-1 14 69190692 to 69194658 3966 + protein coding gene NK3 homeobox 1
Tssr126371 14 69190702 to 69190712 10 + TSS region transcription start site region 126371
Gm37762 14 69209569 to 69213129 3560 - lncRNA gene predicted gene, 37762
Tssr129446 14 69221657 to 69221680 23 - TSS region transcription start site region 129446
Slc25a37 14 69241848 to 69285103 43255 - protein coding gene solute carrier family 25, member 37
Tssr129447 14 69242432 to 69242444 12 - TSS region transcription start site region 129447
Tssr129448 14 69242577 to 69242598 21 - TSS region transcription start site region 129448
Tssr129449 14 69243083 to 69243095 12 - TSS region transcription start site region 129449
Tssr129450 14 69243129 to 69243143 14 - TSS region transcription start site region 129450
Tssr129451 14 69243576 to 69243615 39 - TSS region transcription start site region 129451
Tssr129452 14 69243970 to 69244013 43 - TSS region transcription start site region 129452
Tssr129453 14 69244070 to 69244097 27 - TSS region transcription start site region 129453
Tssr129454 14 69244226 to 69244263 37 - TSS region transcription start site region 129454
Tssr129455 14 69244264 to 69244282 18 - TSS region transcription start site region 129455
Tssr129456 14 69244330 to 69244351 21 - TSS region transcription start site region 129456
Tssr126372 14 69244350 to 69244365 15 + TSS region transcription start site region 126372
Tssr129457 14 69244457 to 69244474 17 - TSS region transcription start site region 129457
Tssr129458 14 69244562 to 69244598 36 - TSS region transcription start site region 129458
Tssr129459 14 69244616 to 69244630 14 - TSS region transcription start site region 129459
Tssr129460 14 69245247 to 69245258 11 - TSS region transcription start site region 129460
Tssr129461 14 69245260 to 69245276 16 - TSS region transcription start site region 129461
Tssr129462 14 69247474 to 69247486 12 - TSS region transcription start site region 129462
Tssr129463 14 69248896 to 69248941 45 - TSS region transcription start site region 129463
Tssr129464 14 69249148 to 69249156 8 - TSS region transcription start site region 129464
Tssr129465 14 69249236 to 69249248 12 - TSS region transcription start site region 129465
Tssr129466 14 69249338 to 69249350 12 - TSS region transcription start site region 129466
Tssr129467 14 69249716 to 69249721 5 - TSS region transcription start site region 129467
Gm31896 14 69258659 to 69261828 3169 - lncRNA gene predicted gene, 31896
Gm27222 14 69259146 to 69262037 2891 + antisense lncRNA gene predicted gene 27222
Gm20236 14 69277601 to 69282140 4539 - unclassified gene predicted gene, 20236
Gm27223 14 69284606 to 69305355 20749 + antisense lncRNA gene predicted gene 27223
Gm31748 14 69285177 to 69285845 668 + lncRNA gene predicted gene, 31748
Synb 14 69289344 to 69294299 4955 - protein coding gene syncytin b
Gm41197 14 69303796 to 69311805 8009 + lncRNA gene predicted gene, 41197
Gm41196 14 69312505 to 69313871 1366 + lncRNA gene predicted gene, 41196
Gm16677 14 69329707 to 69337137 7430 - lincRNA gene predicted gene, 16677
Entpd4 14 69337149 to 69366742 29593 + protein coding gene ectonucleoside triphosphate diphosphohydrolase 4
Gm27221 14 69348897 to 69352259 3362 - antisense lncRNA gene predicted gene 27221
Gm16867 14 69365096 to 69503455 138359 - protein coding gene predicted gene, 16867
Gm46459 14 69373142 to 69375179 2037 + lncRNA gene predicted gene, 46459
Gm21451 14 69390854 to 69480287 89433 + pseudogene predicted gene, 21451
Gm38378 14 69395504 to 69397771 2267 - unclassified gene predicted gene, 38378