Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:68658779-70571046

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436 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr126360 14 68661415 to 68661454 39 + TSS region transcription start site region 126360
D14Mit114 14 68725696 to 68725826 130 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 114
Gm46476 14 68731954 to 68732356 402 + pseudogene predicted gene, 46476
Tssr126361 14 68765605 to 68765608 3 + TSS region transcription start site region 126361
Gm31281 14 68805106 to 68839287 34181 + lncRNA gene predicted gene, 31281
Gm31394 14 68842311 to 68934063 91752 - lncRNA gene predicted gene, 31394
Gm47256 14 68874835 to 68875129 294 + pseudogene predicted gene, 47256
D14Mit86 14 68998701 to 68998816 115 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 86
Gm41192 14 69019434 to 69029652 10218 - antisense lncRNA gene predicted gene, 41192
Tssr126362 14 69029123 to 69029127 4 + TSS region transcription start site region 126362
Stc1 14 69029289 to 69041401 12112 + protein coding gene stanniocalcin 1
Tssr126363 14 69029379 to 69029414 35 + TSS region transcription start site region 126363
Tssr126364 14 69040682 to 69040700 18 + TSS region transcription start site region 126364
Tssr126365 14 69040777 to 69040791 14 + TSS region transcription start site region 126365
Pbwg18 14 69044535 to 69044676 141 QTL postnatal body weight growth 18
D14Mit159 14 69044535 to 69044676 141 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 159
Tssr129442 14 69102948 to 69102958 10 - TSS region transcription start site region 129442
Tssr126366 14 69158580 to 69158587 7 + TSS region transcription start site region 126366
Rps2-ps5 14 69158671 to 69159519 848 + pseudogene ribosomal protein S2, pseudogene 5
1700092C10Rik 14 69164799 to 69171843 7044 - antisense lncRNA gene RIKEN cDNA 1700092C10 gene
Cpgi6668 14 69171618 to 69171970 352 CpG island CpG island 6668
Tssr129443 14 69171800 to 69171823 23 - TSS region transcription start site region 129443
Nkx2-6 14 69171802 to 69175518 3716 + protein coding gene NK2 homeobox 6
Tssr129444 14 69171827 to 69171837 10 - TSS region transcription start site region 129444
Tssr129445 14 69171852 to 69171861 9 - TSS region transcription start site region 129445
Tssr126367 14 69171939 to 69171964 25 + TSS region transcription start site region 126367
Tssr126368 14 69171978 to 69171993 15 + TSS region transcription start site region 126368
Tssr126369 14 69172008 to 69172013 5 + TSS region transcription start site region 126369
Cpgi6669 14 69174476 to 69175387 911 CpG island CpG island 6669
Gm31632 14 69184898 to 69186064 1166 - lncRNA gene predicted gene, 31632
Cpgi6670 14 69190318 to 69191203 885 CpG island CpG island 6670
Tssr126370 14 69190668 to 69190691 23 + TSS region transcription start site region 126370
Nkx3-1 14 69190692 to 69194658 3966 + protein coding gene NK3 homeobox 1
Tssr126371 14 69190702 to 69190712 10 + TSS region transcription start site region 126371
Gm37762 14 69209569 to 69213129 3560 - lncRNA gene predicted gene, 37762
Tssr129446 14 69221657 to 69221680 23 - TSS region transcription start site region 129446
Slc25a37 14 69241848 to 69285103 43255 - protein coding gene solute carrier family 25, member 37
Tssr129447 14 69242432 to 69242444 12 - TSS region transcription start site region 129447
Tssr129448 14 69242577 to 69242598 21 - TSS region transcription start site region 129448
Tssr129449 14 69243083 to 69243095 12 - TSS region transcription start site region 129449
Tssr129450 14 69243129 to 69243143 14 - TSS region transcription start site region 129450
Tssr129451 14 69243576 to 69243615 39 - TSS region transcription start site region 129451
Tssr129452 14 69243970 to 69244013 43 - TSS region transcription start site region 129452
Tssr129453 14 69244070 to 69244097 27 - TSS region transcription start site region 129453
Tssr129454 14 69244226 to 69244263 37 - TSS region transcription start site region 129454
Tssr129455 14 69244264 to 69244282 18 - TSS region transcription start site region 129455
Tssr129456 14 69244330 to 69244351 21 - TSS region transcription start site region 129456
Tssr126372 14 69244350 to 69244365 15 + TSS region transcription start site region 126372
Tssr129457 14 69244457 to 69244474 17 - TSS region transcription start site region 129457
Tssr129458 14 69244562 to 69244598 36 - TSS region transcription start site region 129458
Tssr129459 14 69244616 to 69244630 14 - TSS region transcription start site region 129459
Tssr129460 14 69245247 to 69245258 11 - TSS region transcription start site region 129460
Tssr129461 14 69245260 to 69245276 16 - TSS region transcription start site region 129461
Tssr129462 14 69247474 to 69247486 12 - TSS region transcription start site region 129462
Tssr129463 14 69248896 to 69248941 45 - TSS region transcription start site region 129463
Tssr129464 14 69249148 to 69249156 8 - TSS region transcription start site region 129464
Tssr129465 14 69249236 to 69249248 12 - TSS region transcription start site region 129465
Tssr129466 14 69249338 to 69249350 12 - TSS region transcription start site region 129466
Tssr129467 14 69249716 to 69249721 5 - TSS region transcription start site region 129467
Gm31896 14 69258659 to 69261828 3169 - lncRNA gene predicted gene, 31896
Gm27222 14 69259146 to 69262037 2891 + antisense lncRNA gene predicted gene 27222
Gm20236 14 69277601 to 69282140 4539 - unclassified gene predicted gene, 20236
Gm27223 14 69284606 to 69305355 20749 + antisense lncRNA gene predicted gene 27223
Gm31748 14 69285177 to 69285845 668 + lncRNA gene predicted gene, 31748
Synb 14 69289344 to 69294299 4955 - protein coding gene syncytin b
Gm41197 14 69303796 to 69311805 8009 + lncRNA gene predicted gene, 41197
Gm41196 14 69312505 to 69313871 1366 + lncRNA gene predicted gene, 41196
Gm16677 14 69329707 to 69337137 7430 - lincRNA gene predicted gene, 16677
Entpd4 14 69337149 to 69366742 29593 + protein coding gene ectonucleoside triphosphate diphosphohydrolase 4
Gm27221 14 69348897 to 69352259 3362 - antisense lncRNA gene predicted gene 27221
Gm16867 14 69365096 to 69503455 138359 - protein coding gene predicted gene, 16867
Gm46459 14 69373142 to 69375179 2037 + lncRNA gene predicted gene, 46459
Gm21451 14 69390854 to 69480287 89433 + pseudogene predicted gene, 21451
Gm38378 14 69395504 to 69397771 2267 - unclassified gene predicted gene, 38378
Tssr129468 14 69472829 to 69472850 21 - TSS region transcription start site region 129468
Tssr164707 14 69475597 to 69475599 2 + TSS region transcription start site region 164707
Tssr164708 14 69475824 to 69475838 14 + TSS region transcription start site region 164708
Tssr129469 14 69476628 to 69476641 13 - TSS region transcription start site region 129469
Tssr129470 14 69484104 to 69484113 9 - TSS region transcription start site region 129470
Tssr129471 14 69484710 to 69484723 13 - TSS region transcription start site region 129471
Tssr129472 14 69487575 to 69487630 55 - TSS region transcription start site region 129472
Tssr164709 14 69492357 to 69492360 3 + TSS region transcription start site region 164709
Tssr164720 14 69492913 to 69492920 7 - TSS region transcription start site region 164720
Tssr164721 14 69495044 to 69495049 5 - TSS region transcription start site region 164721
Tssr164722 14 69495692 to 69495699 7 - TSS region transcription start site region 164722
Gm37094 14 69495851 to 69500390 4539 - unclassified gene predicted gene, 37094
Tssr164710 14 69497388 to 69497395 7 + TSS region transcription start site region 164710
Cpgi6671 14 69502045 to 69503608 1563 CpG island CpG island 6671
Gm37847 14 69502600 to 69504096 1496 + unclassified gene predicted gene, 37847
Gm27175 14 69502856 to 69523605 20749 + antisense lncRNA gene predicted gene 27175
Tssr129473 14 69503220 to 69503244 24 - TSS region transcription start site region 129473
Tssr129474 14 69503316 to 69503323 7 - TSS region transcription start site region 129474
Tssr129475 14 69503349 to 69503367 18 - TSS region transcription start site region 129475
Tssr164711 14 69503464 to 69503470 6 + TSS region transcription start site region 164711
Gm32162 14 69503606 to 69504095 489 + lncRNA gene predicted gene, 32162
Gm27179 14 69508632 to 69512549 3917 - protein coding gene predicted gene 27179
Tssr129476 14 69515483 to 69515497 14 - TSS region transcription start site region 129476
Tssr164723 14 69515620 to 69515653 33 - TSS region transcription start site region 164723
Gm41194 14 69522656 to 69530055 7399 + lncRNA gene predicted gene, 41194
Tssr129477 14 69523093 to 69523113 20 - TSS region transcription start site region 129477
Gm41193 14 69530755 to 69532121 1366 + lncRNA gene predicted gene, 41193
Gm27174 14 69546249 to 69555332 9083 - lincRNA gene predicted gene 27174
Tssr164712 14 69546601 to 69546643 42 + TSS region transcription start site region 164712
Cpgi6672 14 69555007 to 69555931 924 CpG island CpG island 6672
Tssr129478 14 69555283 to 69555336 53 - TSS region transcription start site region 129478
Tssr126373 14 69555377 to 69555481 104 + TSS region transcription start site region 126373
Tssr129479 14 69555381 to 69555392 11 - TSS region transcription start site region 129479
Entpd4b 14 69555399 to 69584940 29541 + protein coding gene ectonucleoside triphosphate diphosphohydrolase 4B
Tssr164724 14 69555409 to 69555414 5 - TSS region transcription start site region 164724
Tssr164713 14 69556810 to 69556821 11 + TSS region transcription start site region 164713
Gm27176 14 69567147 to 69570509 3362 - antisense lncRNA gene predicted gene 27176
Gm27177 14 69581540 to 69643872 62332 - antisense lncRNA gene predicted gene 27177
Gm46460 14 69591371 to 69593429 2058 + lncRNA gene predicted gene, 46460
Tssr164714 14 69591679 to 69591684 5 + TSS region transcription start site region 164714
Loxl2 14 69609068 to 69695834 86766 + protein coding gene lysyl oxidase-like 2
Tssr164715 14 69609123 to 69609136 13 + TSS region transcription start site region 164715
Cpgi6673 14 69609138 to 69609763 625 CpG island CpG island 6673
Tssr164716 14 69609160 to 69609174 14 + TSS region transcription start site region 164716
Tssr164717 14 69609185 to 69609190 5 + TSS region transcription start site region 164717
Tssr164718 14 69609472 to 69609486 14 + TSS region transcription start site region 164718
Gm37513 14 69613779 to 69616046 2267 - unclassified gene predicted gene, 37513
Tssr164725 14 69619669 to 69619674 5 - TSS region transcription start site region 164725
Tssr164726 14 69622139 to 69622141 2 - TSS region transcription start site region 164726
Tssr129480 14 69624269 to 69624277 8 - TSS region transcription start site region 129480
Tssr164727 14 69630946 to 69630948 2 - TSS region transcription start site region 164727
Tssr129481 14 69635120 to 69635144 24 - TSS region transcription start site region 129481
Tssr129482 14 69635176 to 69635192 16 - TSS region transcription start site region 129482
Tssr129483 14 69636844 to 69636855 11 - TSS region transcription start site region 129483
Tssr129484 14 69637025 to 69637029 4 - TSS region transcription start site region 129484
Tssr164728 14 69640123 to 69640133 10 - TSS region transcription start site region 164728
Tssr129485 14 69640185 to 69640203 18 - TSS region transcription start site region 129485
Tssr129486 14 69654467 to 69654470 3 - TSS region transcription start site region 129486
Tssr164729 14 69661732 to 69661739 7 - TSS region transcription start site region 164729
Tssr164730 14 69664952 to 69664962 10 - TSS region transcription start site region 164730
Tssr129487 14 69665072 to 69665088 16 - TSS region transcription start site region 129487
Tssr164719 14 69682275 to 69682298 23 + TSS region transcription start site region 164719
Tssr164731 14 69687816 to 69687839 23 - TSS region transcription start site region 164731
Tssr129488 14 69688569 to 69688579 10 - TSS region transcription start site region 129488
Mir6950 14 69692248 to 69692320 72 + miRNA gene microRNA 6950
Tssr126374 14 69695424 to 69695430 6 + TSS region transcription start site region 126374
R3hcc1 14 69697307 to 69707584 10277 - protein coding gene R3H domain and coiled-coil containing 1
Tssr129489 14 69705497 to 69705508 11 - TSS region transcription start site region 129489
Cpgi6674 14 69707057 to 69707679 622 CpG island CpG island 6674
Tssr129490 14 69707507 to 69707543 36 - TSS region transcription start site region 129490
Tssr129491 14 69707546 to 69707567 21 - TSS region transcription start site region 129491
Tssr129492 14 69707573 to 69707614 41 - TSS region transcription start site region 129492
Tssr129493 14 69714807 to 69714836 29 - TSS region transcription start site region 129493
Tssr129494 14 69716644 to 69716656 12 - TSS region transcription start site region 129494
Chmp7 14 69717000 to 69732541 15541 - protein coding gene charged multivesicular body protein 7
Tssr129495 14 69724769 to 69724774 5 - TSS region transcription start site region 129495
Gm18682 14 69726485 to 69728243 1758 + pseudogene predicted gene, 18682
Cpgi6675 14 69732044 to 69732915 871 CpG island CpG island 6675
Tssr129496 14 69732510 to 69732581 71 - TSS region transcription start site region 129496
4930480K23Rik 14 69732784 to 69767113 34329 + lincRNA gene RIKEN cDNA 4930480K23 gene
Gm17740 14 69761171 to 69763538 2367 - pseudogene predicted gene, 17740
Cpgi6676 14 69767433 to 69767893 460 CpG island CpG island 6676
Tssr126375 14 69767470 to 69767526 56 + TSS region transcription start site region 126375
Tnfrsf10b 14 69767472 to 69784411 16939 + protein coding gene tumor necrosis factor receptor superfamily, member 10b
Tssr126376 14 69767542 to 69767553 11 + TSS region transcription start site region 126376
Tssr126377 14 69775108 to 69775119 11 + TSS region transcription start site region 126377
Tssr126378 14 69775157 to 69775193 36 + TSS region transcription start site region 126378
Tssr126379 14 69780619 to 69780630 11 + TSS region transcription start site region 126379
Rhobtb2 14 69784990 to 69805636 20646 - protein coding gene Rho-related BTB domain containing 2
Tssr129497 14 69787118 to 69787120 2 - TSS region transcription start site region 129497
Tssr129498 14 69804114 to 69804142 28 - TSS region transcription start site region 129498
Cpgi6677 14 69804884 to 69805934 1050 CpG island CpG island 6677
Tssr129499 14 69805218 to 69805292 74 - TSS region transcription start site region 129499
Tssr129500 14 69805444 to 69805458 14 - TSS region transcription start site region 129500
Tssr129501 14 69805465 to 69805504 39 - TSS region transcription start site region 129501
Tssr129502 14 69805524 to 69805552 28 - TSS region transcription start site region 129502
Tssr129503 14 69805563 to 69805578 15 - TSS region transcription start site region 129503
Tssr129504 14 69805630 to 69805668 38 - TSS region transcription start site region 129504
Tssr126380 14 69807794 to 69807819 25 + TSS region transcription start site region 126380
Gm46461 14 69811941 to 69825126 13185 - lncRNA gene predicted gene, 46461
Tssr129505 14 69815908 to 69815921 13 - TSS region transcription start site region 129505
Tssr129506 14 69816008 to 69816034 26 - TSS region transcription start site region 129506
Tssr129507 14 69824848 to 69824859 11 - TSS region transcription start site region 129507
Tssr129508 14 69824918 to 69824938 20 - TSS region transcription start site region 129508
Tssr129509 14 69827929 to 69827964 35 - TSS region transcription start site region 129509
Tssr126381 14 69840359 to 69840378 19 + TSS region transcription start site region 126381
Tssr4467 14 69840387 to 69840391 4 + TSS region transcription start site region 4467
Tssr126382 14 69840393 to 69840465 72 + TSS region transcription start site region 126382
Pebp4 14 69840420 to 70059918 219498 + protein coding gene phosphatidylethanolamine binding protein 4
Tssr126383 14 69840466 to 69840477 11 + TSS region transcription start site region 126383
Tssr126384 14 69840478 to 69840481 3 + TSS region transcription start site region 126384
Cpgi6678 14 69861451 to 69861774 323 CpG island CpG island 6678
Gm19017 14 69864070 to 69864809 739 - pseudogene predicted gene, 19017
D14Mit237 14 69946226 to 69946346 120 DNA segment DNA Segment, Chr 14, Massachusetts Institute of Technology 237
Gm9148 14 69953458 to 69953969 511 + pseudogene predicted gene 9148
Gm41198 14 69974258 to 69995327 21069 - lncRNA gene predicted gene, 41198
Gm33524 14 70018231 to 70057367 39136 - antisense lncRNA gene predicted gene, 33524
D14Mit236 14 70026770 to 70026886 116 DNA segment DNA Segment, Chr 14, Massachusetts Institute of Technology 236
Tssr129510 14 70056970 to 70057015 45 - TSS region transcription start site region 129510
Cpgi6679 14 70067671 to 70067911 240 CpG island CpG island 6679
Tssr129511 14 70069126 to 70069129 3 - TSS region transcription start site region 129511
Cpgi6680 14 70074518 to 70076200 1682 CpG island CpG island 6680
Tssr126385 14 70075154 to 70075167 13 + TSS region transcription start site region 126385
Tssr126386 14 70075190 to 70075199 9 + TSS region transcription start site region 126386
Cpgi6681 14 70076612 to 70080708 4096 CpG island CpG island 6681
Tssr126387 14 70076907 to 70076923 16 + TSS region transcription start site region 126387