Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:67066873-67912079

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83 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ppp2r2a 14 67014056 to 67072444 58388 - protein coding gene protein phosphatase 2, regulatory subunit B, alpha
Cpgi6654 14 67071754 to 67072899 1145 CpG island CpG island 6654
Tssr129380 14 67072393 to 67072402 9 - TSS region transcription start site region 129380
Tssr129381 14 67072417 to 67072461 44 - TSS region transcription start site region 129381
Tssr129382 14 67072465 to 67072476 11 - TSS region transcription start site region 129382
Tssr129383 14 67072694 to 67072699 5 - TSS region transcription start site region 129383
Gm27647 14 67074830 to 67074947 117 + miRNA gene predicted gene, 27647
Tssr4464 14 67107236 to 67107238 2 + TSS region transcription start site region 4464
Gm30438 14 67159163 to 67189212 30049 + lncRNA gene predicted gene, 30438
Tssr126323 14 67159240 to 67159257 17 + TSS region transcription start site region 126323
Tssr126324 14 67176821 to 67176843 22 + TSS region transcription start site region 126324
Tssr126325 14 67176875 to 67176877 2 + TSS region transcription start site region 126325
D14Mit143 14 67179841 to 67179942 101 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 143
Tssr126326 14 67189250 to 67189254 4 + TSS region transcription start site region 126326
Gm30806 14 67201526 to 67209103 7577 + lincRNA gene predicted gene, 30806
Cpgi6655 14 67229626 to 67229918 292 CpG island CpG island 6655
Cpgi6656 14 67230410 to 67230672 262 CpG island CpG island 6656
Cpgi6657 14 67231827 to 67232255 428 CpG island CpG island 6657
Gm20675 14 67232437 to 67233129 692 - lincRNA gene predicted gene 20675
Tssr126327 14 67233182 to 67233208 26 + TSS region transcription start site region 126327
Cpgi6658 14 67233217 to 67233853 636 CpG island CpG island 6658
Tssr126328 14 67233286 to 67233346 60 + TSS region transcription start site region 126328
Ebf2 14 67233292 to 67430918 197626 + protein coding gene early B cell factor 2
Tssr126329 14 67233435 to 67233456 21 + TSS region transcription start site region 126329
Tssr126330 14 67233902 to 67233910 8 + TSS region transcription start site region 126330
Cpgi6659 14 67234181 to 67234695 514 CpG island CpG island 6659
Tssr126331 14 67234588 to 67234617 29 + TSS region transcription start site region 126331
Tssr126332 14 67234620 to 67234645 25 + TSS region transcription start site region 126332
Tssr126333 14 67234731 to 67234736 5 + TSS region transcription start site region 126333
Tssr126334 14 67234795 to 67234837 42 + TSS region transcription start site region 126334
Tssr126335 14 67234845 to 67234865 20 + TSS region transcription start site region 126335
Cpgi6660 14 67234900 to 67236910 2010 CpG island CpG island 6660
Tssr126336 14 67237708 to 67237745 37 + TSS region transcription start site region 126336
Tssr126337 14 67256520 to 67256523 3 + TSS region transcription start site region 126337
Gm23178 14 67274869 to 67274963 94 - miRNA gene predicted gene, 23178
Gm10861 14 67297279 to 67298064 785 unclassified gene predicted gene 10861
Tssr126338 14 67297990 to 67297995 5 + TSS region transcription start site region 126338
Tssr126339 14 67299344 to 67299348 4 + TSS region transcription start site region 126339
Gm6878 14 67304888 to 67314711 9823 - antisense lncRNA gene predicted gene 6878
Tssr129384 14 67308181 to 67308216 35 - TSS region transcription start site region 129384
Tssr126340 14 67316118 to 67316121 3 + TSS region transcription start site region 126340
1700120O09Rik 14 67324894 to 67335928 11034 - unclassified gene RIKEN cDNA 1700120O09 gene
4930438E09Rik 14 67332042 to 67397742 65700 - antisense lncRNA gene RIKEN cDNA 4930438E09 gene
Tssr129385 14 67336160 to 67336198 38 - TSS region transcription start site region 129385
9430085L16Rik 14 67340788 to 67341936 1148 unclassified gene RIKEN cDNA 9430085L16 gene
D14Mit87 14 67346014 to 67346189 175 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 87
Tssr126341 14 67398826 to 67398865 39 + TSS region transcription start site region 126341
Gm10860 14 67430194 to 67432969 2775 - antisense lncRNA gene predicted gene 10860
D14Mit6.1 14 67456627 to 67456742 115 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 6.1
D14Mit6 14 67456760 to 67456907 147 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 6
Gm38409 14 67476873 to 67502079 25206 + lincRNA gene predicted gene, 38409
Gm24981 14 67566850 to 67566981 131 + snoRNA gene predicted gene, 24981
Gm47010 14 67588363 to 67588792 429 - pseudogene predicted gene, 47010
D14Mit157 14 67607448 to 67607597 149 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 157
Cpgi6661 14 67608126 to 67608635 509 CpG island CpG island 6661
Cpgi6662 14 67613962 to 67614152 190 CpG island CpG island 6662
Gm20667 14 67673177 to 67675106 1929 - sense overlapping lncRNA gene predicted gene 20667
Cdca2 14 67676331 to 67715841 39510 - protein coding gene cell division cycle associated 2
Tssr129386 14 67695619 to 67695623 4 - TSS region transcription start site region 129386
Tssr129387 14 67708535 to 67708548 13 - TSS region transcription start site region 129387
Tssr129388 14 67713210 to 67713229 19 - TSS region transcription start site region 129388
Cpgi6663 14 67715137 to 67716881 1744 CpG island CpG island 6663
Tssr129389 14 67715343 to 67715425 82 - TSS region transcription start site region 129389
Tssr129390 14 67715564 to 67715577 13 - TSS region transcription start site region 129390
Tssr129391 14 67715585 to 67715640 55 - TSS region transcription start site region 129391
Kctd9 14 67716084 to 67742310 26226 + protein coding gene potassium channel tetramerisation domain containing 9
Tssr126342 14 67716095 to 67716124 29 + TSS region transcription start site region 126342
Tssr4465 14 67716135 to 67716228 93 + TSS region transcription start site region 4465
Tssr126343 14 67716238 to 67716285 47 + TSS region transcription start site region 126343
Tssr126344 14 67716345 to 67716359 14 + TSS region transcription start site region 126344
Gnrh1 14 67745181 to 67749439 4258 + protein coding gene gonadotropin releasing hormone 1
Tssr126345 14 67745265 to 67745269 4 + TSS region transcription start site region 126345
D14Nds6 14 67749436 to 67749657 221 DNA segment DNA segment, Chr 14, Nuffield Department of Surgery 6
D14Mit28 14 67749485 to 67749690 205 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 28
Dock5 14 67752135 to 67933442 181307 - protein coding gene dedicator of cytokinesis 5
Tssr129392 14 67780417 to 67780441 24 - TSS region transcription start site region 129392
Tssr129393 14 67780462 to 67780476 14 - TSS region transcription start site region 129393
Tssr126346 14 67793389 to 67793399 10 + TSS region transcription start site region 126346
D14Mit223.2 14 67799326 to 67799439 113 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 223.2
D14Mit223.1 14 67799568 to 67799677 109 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 223.1
Tssr126347 14 67812197 to 67812204 7 + TSS region transcription start site region 126347
Mir6539 14 67859636 to 67859745 109 - miRNA gene microRNA 6539
Tssr129394 14 67886931 to 67886935 4 - TSS region transcription start site region 129394