Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:66637008-71707013

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821 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Epfpq1 14 21012382 to 71648361 50635979 QTL epididymal fat percentage QTL 1
Acigg10 14 31183419 to 66978401 35794982 QTL anti COL7 IgG2b antibody 10
Cosz2 14 35323840 to 68548287 33224447 QTL cocaine seizure 2
Cia51 14 65866444 to 68548287 2681843 QTL collagen induced arthritis QTL 51
Adra1a 14 66635251 to 66771168 135917 + protein coding gene adrenergic receptor, alpha 1a
Cpgi6646 14 66636996 to 66637246 250 CpG island CpG island 6646
Cpgi6647 14 66637750 to 66638480 730 CpG island CpG island 6647
Tssr126310 14 66682725 to 66682730 5 + TSS region transcription start site region 126310
Tssr129317 14 66713634 to 66713647 13 - TSS region transcription start site region 129317
Tssr126311 14 66728887 to 66728908 21 + TSS region transcription start site region 126311
Tssr126312 14 66729111 to 66729133 22 + TSS region transcription start site region 126312
Tssr129318 14 66750023 to 66750046 23 - TSS region transcription start site region 129318
Tssr129319 14 66750108 to 66750113 5 - TSS region transcription start site region 129319
Tssr129320 14 66750118 to 66750123 5 - TSS region transcription start site region 129320
Gm10032 14 66784480 to 66793758 9278 + lincRNA gene predicted gene 10032
Tssr126313 14 66784500 to 66784502 2 + TSS region transcription start site region 126313
Tssr126314 14 66784507 to 66784513 6 + TSS region transcription start site region 126314
Tssr126315 14 66784523 to 66784537 14 + TSS region transcription start site region 126315
Tssr126316 14 66784539 to 66784546 7 + TSS region transcription start site region 126316
Gm9130 14 66797856 to 66798378 522 - pseudogene predicted gene 9130
Dpysl2 14 66802864 to 66868688 65824 - protein coding gene dihydropyrimidinase-like 2
Tssr129321 14 66803460 to 66803474 14 - TSS region transcription start site region 129321
Tssr129322 14 66803538 to 66803560 22 - TSS region transcription start site region 129322
Tssr129323 14 66804011 to 66804025 14 - TSS region transcription start site region 129323
Tssr129324 14 66804502 to 66804520 18 - TSS region transcription start site region 129324
Tssr129325 14 66804872 to 66804890 18 - TSS region transcription start site region 129325
Tssr129326 14 66804896 to 66804906 10 - TSS region transcription start site region 129326
Tssr129327 14 66805208 to 66805219 11 - TSS region transcription start site region 129327
Tssr129328 14 66805245 to 66805262 17 - TSS region transcription start site region 129328
Tssr129329 14 66805287 to 66805316 29 - TSS region transcription start site region 129329
Tssr129330 14 66807904 to 66807945 41 - TSS region transcription start site region 129330
Tssr129331 14 66814998 to 66815009 11 - TSS region transcription start site region 129331
Tssr129332 14 66815021 to 66815043 22 - TSS region transcription start site region 129332
Tssr129333 14 66815463 to 66815515 52 - TSS region transcription start site region 129333
Cpgi6648 14 66824156 to 66824387 231 CpG island CpG island 6648
Tssr129334 14 66824400 to 66824415 15 - TSS region transcription start site region 129334
Tssr129335 14 66824417 to 66824436 19 - TSS region transcription start site region 129335
Tssr129336 14 66824445 to 66824466 21 - TSS region transcription start site region 129336
Tssr129337 14 66824622 to 66824628 6 - TSS region transcription start site region 129337
Tssr129338 14 66824844 to 66824854 10 - TSS region transcription start site region 129338
Tssr129339 14 66829976 to 66829982 6 - TSS region transcription start site region 129339
Tssr129340 14 66831117 to 66831194 77 - TSS region transcription start site region 129340
Tssr129341 14 66831340 to 66831354 14 - TSS region transcription start site region 129341
Tssr129342 14 66831462 to 66831503 41 - TSS region transcription start site region 129342
Tssr129343 14 66831638 to 66831669 31 - TSS region transcription start site region 129343
Tssr129344 14 66834253 to 66834298 45 - TSS region transcription start site region 129344
Tssr129345 14 66834302 to 66834321 19 - TSS region transcription start site region 129345
Tssr129346 14 66834517 to 66834528 11 - TSS region transcription start site region 129346
Tssr129347 14 66845655 to 66845660 5 - TSS region transcription start site region 129347
Tssr129348 14 66846432 to 66846474 42 - TSS region transcription start site region 129348
Tssr129349 14 66846519 to 66846535 16 - TSS region transcription start site region 129349
Tssr129350 14 66847292 to 66847306 14 - TSS region transcription start site region 129350
Tssr129351 14 66847618 to 66847631 13 - TSS region transcription start site region 129351
Tssr126317 14 66847863 to 66847885 22 + TSS region transcription start site region 126317
Tssr4462 14 66859506 to 66859510 4 + TSS region transcription start site region 4462
Tssr129352 14 66865893 to 66865895 2 - TSS region transcription start site region 129352
Cpgi6649 14 66867385 to 66868223 838 CpG island CpG island 6649
Tssr129353 14 66868114 to 66868148 34 - TSS region transcription start site region 129353
Tssr129354 14 66868421 to 66868432 11 - TSS region transcription start site region 129354
Tssr129355 14 66868572 to 66868684 112 - TSS region transcription start site region 129355
Cpgi6650 14 66868587 to 66869795 1208 CpG island CpG island 6650
Gm5464 14 66868850 to 66871005 2155 + protein coding gene predicted gene 5464
Tssr129356 14 66868919 to 66868948 29 - TSS region transcription start site region 129356
Tssr129357 14 66869018 to 66869067 49 - TSS region transcription start site region 129357
Tssr129358 14 66869077 to 66869103 26 - TSS region transcription start site region 129358
Tssr129359 14 66869190 to 66869221 31 - TSS region transcription start site region 129359
Tssr126318 14 66869284 to 66869289 5 + TSS region transcription start site region 126318
Tssr129360 14 66871659 to 66871708 49 - TSS region transcription start site region 129360
Cpgi6651 14 66909882 to 66911690 1808 CpG island CpG island 6651
Tssr129361 14 66910891 to 66910961 70 - TSS region transcription start site region 129361
Tssr129362 14 66911034 to 66911047 13 - TSS region transcription start site region 129362
Tssr129363 14 66911060 to 66911061 1 - TSS region transcription start site region 129363
Tssr129364 14 66911062 to 66911073 11 - TSS region transcription start site region 129364
Tssr129365 14 66911077 to 66911093 16 - TSS region transcription start site region 129365
Tssr129366 14 66911095 to 66911106 11 - TSS region transcription start site region 129366
Pnma2 14 66911170 to 66921023 9853 + protein coding gene paraneoplastic antigen MA2
Tssr126319 14 66911220 to 66911228 8 + TSS region transcription start site region 126319
Tssr126320 14 66911229 to 66911247 18 + TSS region transcription start site region 126320
Cpgi6652 14 66911962 to 66912230 268 CpG island CpG island 6652
4930578I07Rik 14 66937365 to 66938736 1371 + unclassified non-coding RNA gene RIKEN cDNA 4930578I07 gene
Tssr126321 14 66966790 to 66966799 9 + TSS region transcription start site region 126321
Gm9570 14 66967182 to 66969867 2685 + pseudogene predicted gene 9570
Gm24258 14 66970452 to 66970584 132 + snoRNA gene predicted gene, 24258
Tssr4463 14 66978440 to 66978445 5 - TSS region transcription start site region 4463
Bnip3l 14 66985239 to 67008877 23638 - protein coding gene BCL2/adenovirus E1B interacting protein 3-like
Tssr129367 14 66986027 to 66986040 13 - TSS region transcription start site region 129367
2310068C19Rik 14 66990966 to 66992406 1440 unclassified gene RIKEN cDNA 2310068C19 gene
Tssr129368 14 66999901 to 66999926 25 - TSS region transcription start site region 129368
Tssr129369 14 67000441 to 67000455 14 - TSS region transcription start site region 129369
Tssr129370 14 67000463 to 67000485 22 - TSS region transcription start site region 129370
Tssr129371 14 67000488 to 67000502 14 - TSS region transcription start site region 129371
Tssr129372 14 67006434 to 67006438 4 - TSS region transcription start site region 129372
Cpgi6653 14 67007971 to 67009219 1248 CpG island CpG island 6653
Tssr129373 14 67008085 to 67008090 5 - TSS region transcription start site region 129373
Tssr129374 14 67008525 to 67008542 17 - TSS region transcription start site region 129374
Tssr129375 14 67008834 to 67008867 33 - TSS region transcription start site region 129375
Ppp2r2a 14 67014056 to 67072444 58388 - protein coding gene protein phosphatase 2, regulatory subunit B, alpha
Tssr126322 14 67015943 to 67015948 5 + TSS region transcription start site region 126322
Tssr129376 14 67055803 to 67055807 4 - TSS region transcription start site region 129376
Tssr129377 14 67062559 to 67062564 5 - TSS region transcription start site region 129377
Tssr129378 14 67062837 to 67062839 2 - TSS region transcription start site region 129378
Tssr129379 14 67063070 to 67063104 34 - TSS region transcription start site region 129379
Cpgi6654 14 67071754 to 67072899 1145 CpG island CpG island 6654
Tssr129380 14 67072393 to 67072402 9 - TSS region transcription start site region 129380
Tssr129381 14 67072417 to 67072461 44 - TSS region transcription start site region 129381
Tssr129382 14 67072465 to 67072476 11 - TSS region transcription start site region 129382
Tssr129383 14 67072694 to 67072699 5 - TSS region transcription start site region 129383
Gm27647 14 67074830 to 67074947 117 + miRNA gene predicted gene, 27647
Tssr4464 14 67107236 to 67107238 2 + TSS region transcription start site region 4464
Gm30438 14 67159163 to 67189212 30049 + lncRNA gene predicted gene, 30438
Tssr126323 14 67159240 to 67159257 17 + TSS region transcription start site region 126323
Tssr126324 14 67176821 to 67176843 22 + TSS region transcription start site region 126324
Tssr126325 14 67176875 to 67176877 2 + TSS region transcription start site region 126325
D14Mit143 14 67179841 to 67179942 101 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 143
Tssr126326 14 67189250 to 67189254 4 + TSS region transcription start site region 126326
Gm30806 14 67201526 to 67209103 7577 + lincRNA gene predicted gene, 30806
Cpgi6655 14 67229626 to 67229918 292 CpG island CpG island 6655
Cpgi6656 14 67230410 to 67230672 262 CpG island CpG island 6656
Cpgi6657 14 67231827 to 67232255 428 CpG island CpG island 6657
Gm20675 14 67232437 to 67233129 692 - lincRNA gene predicted gene 20675
Tssr126327 14 67233182 to 67233208 26 + TSS region transcription start site region 126327
Cpgi6658 14 67233217 to 67233853 636 CpG island CpG island 6658
Tssr126328 14 67233286 to 67233346 60 + TSS region transcription start site region 126328
Ebf2 14 67233292 to 67430918 197626 + protein coding gene early B cell factor 2
Tssr126329 14 67233435 to 67233456 21 + TSS region transcription start site region 126329
Tssr126330 14 67233902 to 67233910 8 + TSS region transcription start site region 126330
Cpgi6659 14 67234181 to 67234695 514 CpG island CpG island 6659
Tssr126331 14 67234588 to 67234617 29 + TSS region transcription start site region 126331
Tssr126332 14 67234620 to 67234645 25 + TSS region transcription start site region 126332
Tssr126333 14 67234731 to 67234736 5 + TSS region transcription start site region 126333
Tssr126334 14 67234795 to 67234837 42 + TSS region transcription start site region 126334
Tssr126335 14 67234845 to 67234865 20 + TSS region transcription start site region 126335
Cpgi6660 14 67234900 to 67236910 2010 CpG island CpG island 6660
Tssr126336 14 67237708 to 67237745 37 + TSS region transcription start site region 126336
Tssr126337 14 67256520 to 67256523 3 + TSS region transcription start site region 126337
Gm23178 14 67274869 to 67274963 94 - miRNA gene predicted gene, 23178
Gm10861 14 67297279 to 67298064 785 unclassified gene predicted gene 10861
Tssr126338 14 67297990 to 67297995 5 + TSS region transcription start site region 126338
Tssr126339 14 67299344 to 67299348 4 + TSS region transcription start site region 126339
Gm6878 14 67304888 to 67314711 9823 - antisense lncRNA gene predicted gene 6878
Tssr129384 14 67308181 to 67308216 35 - TSS region transcription start site region 129384
Tssr126340 14 67316118 to 67316121 3 + TSS region transcription start site region 126340
1700120O09Rik 14 67324894 to 67335928 11034 - unclassified gene RIKEN cDNA 1700120O09 gene
4930438E09Rik 14 67332042 to 67397742 65700 - antisense lncRNA gene RIKEN cDNA 4930438E09 gene
Tssr129385 14 67336160 to 67336198 38 - TSS region transcription start site region 129385
9430085L16Rik 14 67340788 to 67341936 1148 unclassified gene RIKEN cDNA 9430085L16 gene
D14Mit87 14 67346014 to 67346189 175 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 87
Tssr126341 14 67398826 to 67398865 39 + TSS region transcription start site region 126341
Gm10860 14 67430194 to 67432969 2775 - antisense lncRNA gene predicted gene 10860
D14Mit6.1 14 67456627 to 67456742 115 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 6.1
D14Mit6 14 67456760 to 67456907 147 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 6
Gm38409 14 67476873 to 67502079 25206 + lincRNA gene predicted gene, 38409
Gm24981 14 67566850 to 67566981 131 + snoRNA gene predicted gene, 24981
Gm47010 14 67588363 to 67588792 429 - pseudogene predicted gene, 47010
D14Mit157 14 67607448 to 67607597 149 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 157
Cpgi6661 14 67608126 to 67608635 509 CpG island CpG island 6661
Cpgi6662 14 67613962 to 67614152 190 CpG island CpG island 6662
Gm20667 14 67673177 to 67675106 1929 - sense overlapping lncRNA gene predicted gene 20667
Cdca2 14 67676331 to 67715841 39510 - protein coding gene cell division cycle associated 2
Tssr129386 14 67695619 to 67695623 4 - TSS region transcription start site region 129386
Tssr129387 14 67708535 to 67708548 13 - TSS region transcription start site region 129387
Tssr129388 14 67713210 to 67713229 19 - TSS region transcription start site region 129388
Cpgi6663 14 67715137 to 67716881 1744 CpG island CpG island 6663
Tssr129389 14 67715343 to 67715425 82 - TSS region transcription start site region 129389
Tssr129390 14 67715564 to 67715577 13 - TSS region transcription start site region 129390
Tssr129391 14 67715585 to 67715640 55 - TSS region transcription start site region 129391
Kctd9 14 67716084 to 67742310 26226 + protein coding gene potassium channel tetramerisation domain containing 9
Tssr126342 14 67716095 to 67716124 29 + TSS region transcription start site region 126342
Tssr4465 14 67716135 to 67716228 93 + TSS region transcription start site region 4465
Tssr126343 14 67716238 to 67716285 47 + TSS region transcription start site region 126343
Tssr126344 14 67716345 to 67716359 14 + TSS region transcription start site region 126344
Gnrh1 14 67745181 to 67749439 4258 + protein coding gene gonadotropin releasing hormone 1
Tssr126345 14 67745265 to 67745269 4 + TSS region transcription start site region 126345
D14Nds6 14 67749436 to 67749657 221 DNA segment DNA segment, Chr 14, Nuffield Department of Surgery 6
D14Mit28 14 67749485 to 67749690 205 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 28
Dock5 14 67752135 to 67933442 181307 - protein coding gene dedicator of cytokinesis 5
Tssr129392 14 67780417 to 67780441 24 - TSS region transcription start site region 129392
Tssr129393 14 67780462 to 67780476 14 - TSS region transcription start site region 129393
Tssr126346 14 67793389 to 67793399 10 + TSS region transcription start site region 126346
D14Mit223.2 14 67799326 to 67799439 113 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 223.2
D14Mit223.1 14 67799568 to 67799677 109 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 223.1
Tssr126347 14 67812197 to 67812204 7 + TSS region transcription start site region 126347
Mir6539 14 67859636 to 67859745 109 - miRNA gene microRNA 6539
Tssr129394 14 67886931 to 67886935 4 - TSS region transcription start site region 129394
Cpgi6664 14 67932576 to 67934265 1689 CpG island CpG island 6664
Tssr129395 14 67933424 to 67933450 26 - TSS region transcription start site region 129395
Tssr129396 14 67933512 to 67933585 73 - TSS region transcription start site region 129396
Tssr129397 14 67933692 to 67933706 14 - TSS region transcription start site region 129397
Tssr129398 14 67933735 to 67933763 28 - TSS region transcription start site region 129398
Gm41188 14 67948160 to 67960914 12754 + lncRNA gene predicted gene, 41188
Gm41189 14 68034379 to 68035959 1580 - lncRNA gene predicted gene, 41189
Gm31107 14 68044428 to 68051330 6902 - lincRNA gene predicted gene, 31107
Cpgi6665 14 68051100 to 68051434 334 CpG island CpG island 6665
Cpgi6666 14 68083565 to 68085208 1643 CpG island CpG island 6666
Tssr126348 14 68083853 to 68083870 17 + TSS region transcription start site region 126348
Nefl 14 68083884 to 68087745 3861 + protein coding gene neurofilament, light polypeptide
Tssr126349 14 68086638 to 68086653 15 + TSS region transcription start site region 126349
Tssr126350 14 68086688 to 68086697 9 + TSS region transcription start site region 126350
Tssr126351 14 68086708 to 68086720 12 + TSS region transcription start site region 126351
Tssr129399 14 68086794 to 68086810 16 - TSS region transcription start site region 129399