Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:64947060-65254855

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hmbox1 14 64811600 to 64949871 138271 - protein coding gene homeobox containing 1
Tssr129233 14 64948900 to 64948917 17 - TSS region transcription start site region 129233
Tssr129234 14 64949330 to 64949370 40 - TSS region transcription start site region 129234
Tssr129235 14 64949632 to 64949674 42 - TSS region transcription start site region 129235
Cpgi6624 14 64949673 to 64950192 519 CpG island CpG island 6624
Tssr129236 14 64949730 to 64949751 21 - TSS region transcription start site region 129236
Tssr129237 14 64949814 to 64949820 6 - TSS region transcription start site region 129237
Tssr129238 14 64949838 to 64949886 48 - TSS region transcription start site region 129238
Tssr126194 14 64950037 to 64950056 19 + TSS region transcription start site region 126194
Ints9 14 64950045 to 65039832 89787 + protein coding gene integrator complex subunit 9
Tssr126195 14 64950104 to 64950115 11 + TSS region transcription start site region 126195
Tssr126196 14 64950264 to 64950307 43 + TSS region transcription start site region 126196
Tssr126197 14 64950314 to 64950323 9 + TSS region transcription start site region 126197
Tssr126198 14 64953141 to 64953143 2 + TSS region transcription start site region 126198
Extl3 14 65052060 to 65149855 97795 - protein coding gene exostoses (multiple)-like 3
Cpgi6625 14 65071387 to 65071540 153 CpG island CpG island 6625
Tssr126199 14 65076465 to 65076468 3 + TSS region transcription start site region 126199
Cpgi6626 14 65097396 to 65098440 1044 CpG island CpG island 6626
Tssr129239 14 65098031 to 65098100 69 - TSS region transcription start site region 129239
Tssr126200 14 65100697 to 65100709 12 + TSS region transcription start site region 126200
Cpgi6627 14 65149510 to 65150242 732 CpG island CpG island 6627
Tssr129240 14 65149833 to 65149847 14 - TSS region transcription start site region 129240
Tssr129241 14 65149854 to 65149897 43 - TSS region transcription start site region 129241
Gm48299 14 65166914 to 65167191 277 + pseudogene predicted gene, 48299
Gm30008 14 65171279 to 65174949 3670 - lincRNA gene predicted gene, 30008
Tssr126201 14 65172309 to 65172330 21 + TSS region transcription start site region 126201
Tssr126202 14 65172332 to 65172361 29 + TSS region transcription start site region 126202
Gm41177 14 65172355 to 65185337 12982 + lincRNA gene predicted gene, 41177
Tssr126203 14 65174044 to 65174055 11 + TSS region transcription start site region 126203
Tssr126204 14 65174061 to 65174071 10 + TSS region transcription start site region 126204
Tssr129242 14 65174924 to 65174934 10 - TSS region transcription start site region 129242
Tssr129243 14 65174946 to 65174963 17 - TSS region transcription start site region 129243
Fzd3 14 65192449 to 65262463 70014 - protein coding gene frizzled class receptor 3
Tssr129244 14 65194975 to 65194993 18 - TSS region transcription start site region 129244
Tssr129245 14 65199995 to 65199999 4 - TSS region transcription start site region 129245
Gm27263 14 65206894 to 65206969 75 - unclassified non-coding RNA gene predicted gene, 27263
Gm9086 14 65207119 to 65207731 612 + pseudogene predicted gene 9086
D130009B15Rik 14 65216709 to 65219642 2933 unclassified gene RIKEN cDNA D130009B15 gene
Tssr126205 14 65227700 to 65227705 5 + TSS region transcription start site region 126205