Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:64843031-65353100

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54 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hmbox1 14 64811600 to 64949871 138271 - protein coding gene homeobox containing 1
Gm4573 14 64921821 to 64922085 264 + pseudogene predicted gene 4573
Tssr129232 14 64942280 to 64942285 5 - TSS region transcription start site region 129232
Tssr129233 14 64948900 to 64948917 17 - TSS region transcription start site region 129233
Tssr129234 14 64949330 to 64949370 40 - TSS region transcription start site region 129234
Tssr129235 14 64949632 to 64949674 42 - TSS region transcription start site region 129235
Cpgi6624 14 64949673 to 64950192 519 CpG island CpG island 6624
Tssr129236 14 64949730 to 64949751 21 - TSS region transcription start site region 129236
Tssr129237 14 64949814 to 64949820 6 - TSS region transcription start site region 129237
Tssr129238 14 64949838 to 64949886 48 - TSS region transcription start site region 129238
Tssr126194 14 64950037 to 64950056 19 + TSS region transcription start site region 126194
Ints9 14 64950045 to 65039832 89787 + protein coding gene integrator complex subunit 9
Tssr126195 14 64950104 to 64950115 11 + TSS region transcription start site region 126195
Tssr126196 14 64950264 to 64950307 43 + TSS region transcription start site region 126196
Tssr126197 14 64950314 to 64950323 9 + TSS region transcription start site region 126197
Tssr126198 14 64953141 to 64953143 2 + TSS region transcription start site region 126198
Extl3 14 65052060 to 65149855 97795 - protein coding gene exostoses (multiple)-like 3
Cpgi6625 14 65071387 to 65071540 153 CpG island CpG island 6625
Tssr126199 14 65076465 to 65076468 3 + TSS region transcription start site region 126199
Cpgi6626 14 65097396 to 65098440 1044 CpG island CpG island 6626
Tssr129239 14 65098031 to 65098100 69 - TSS region transcription start site region 129239
Tssr126200 14 65100697 to 65100709 12 + TSS region transcription start site region 126200
Cpgi6627 14 65149510 to 65150242 732 CpG island CpG island 6627
Tssr129240 14 65149833 to 65149847 14 - TSS region transcription start site region 129240
Tssr129241 14 65149854 to 65149897 43 - TSS region transcription start site region 129241
Gm48299 14 65166914 to 65167191 277 + pseudogene predicted gene, 48299
Gm30008 14 65171279 to 65174949 3670 - lincRNA gene predicted gene, 30008
Tssr126201 14 65172309 to 65172330 21 + TSS region transcription start site region 126201
Tssr126202 14 65172332 to 65172361 29 + TSS region transcription start site region 126202
Gm41177 14 65172355 to 65185337 12982 + lincRNA gene predicted gene, 41177
Tssr126203 14 65174044 to 65174055 11 + TSS region transcription start site region 126203
Tssr126204 14 65174061 to 65174071 10 + TSS region transcription start site region 126204
Tssr129242 14 65174924 to 65174934 10 - TSS region transcription start site region 129242
Tssr129243 14 65174946 to 65174963 17 - TSS region transcription start site region 129243
Fzd3 14 65192449 to 65262463 70014 - protein coding gene frizzled class receptor 3
Tssr129244 14 65194975 to 65194993 18 - TSS region transcription start site region 129244
Tssr129245 14 65199995 to 65199999 4 - TSS region transcription start site region 129245
Gm27263 14 65206894 to 65206969 75 - unclassified non-coding RNA gene predicted gene, 27263
Gm9086 14 65207119 to 65207731 612 + pseudogene predicted gene 9086
D130009B15Rik 14 65216709 to 65219642 2933 unclassified gene RIKEN cDNA D130009B15 gene
Tssr126205 14 65227700 to 65227705 5 + TSS region transcription start site region 126205
Tssr129246 14 65255879 to 65255883 4 - TSS region transcription start site region 129246
Cpgi6628 14 65261605 to 65262973 1368 CpG island CpG island 6628
Tssr4456 14 65262366 to 65262373 7 - TSS region transcription start site region 4456
Tssr129247 14 65262391 to 65262490 99 - TSS region transcription start site region 129247
Fbxo16 14 65266618 to 65323973 57355 + protein coding gene F-box protein 16
Tssr126206 14 65266680 to 65266692 12 + TSS region transcription start site region 126206
Tssr126207 14 65266704 to 65266752 48 + TSS region transcription start site region 126207
Gm41178 14 65296452 to 65299193 2741 - lncRNA gene predicted gene, 41178
Tssr129248 14 65299348 to 65299386 38 - TSS region transcription start site region 129248
Gm48433 14 65326331 to 65337604 11273 + lincRNA gene predicted gene, 48433
Cpgi6629 14 65331796 to 65332494 698 CpG island CpG island 6629
Cpgi6630 14 65343252 to 65344242 990 CpG island CpG island 6630
Gm48449 14 65351442 to 65359410 7968 - antisense lncRNA gene predicted gene, 48449