Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:64588578-66128589

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245 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mir124a-1hg 14 64588115 to 64593961 5846 + lincRNA gene Mir124-1 host gene (non-protein coding)
Tssr126176 14 64589689 to 64589753 64 + TSS region transcription start site region 126176
Tssr126177 14 64589802 to 64589848 46 + TSS region transcription start site region 126177
Cpgi6622 14 64589821 to 64590932 1111 CpG island CpG island 6622
Tssr126178 14 64589861 to 64589898 37 + TSS region transcription start site region 126178
Tssr126179 14 64589900 to 64589910 10 + TSS region transcription start site region 126179
Tssr126180 14 64590294 to 64590307 13 + TSS region transcription start site region 126180
Tssr126181 14 64590378 to 64590389 11 + TSS region transcription start site region 126181
Tssr126182 14 64590404 to 64590426 22 + TSS region transcription start site region 126182
Tssr126183 14 64590438 to 64590452 14 + TSS region transcription start site region 126183
Tssr126184 14 64590461 to 64590473 12 + TSS region transcription start site region 126184
Tssr126185 14 64590481 to 64590488 7 + TSS region transcription start site region 126185
Mir124a-1 14 64590657 to 64590741 84 + miRNA gene microRNA 124a-1
Tssr126186 14 64590729 to 64590732 3 + TSS region transcription start site region 126186
Mir3078 14 64591185 to 64591271 86 + miRNA gene microRNA 3078
Gm36924 14 64624577 to 64638185 13608 + lncRNA gene predicted gene, 36924
Cpgi6623 14 64652271 to 64652958 687 CpG island CpG island 6623
Tssr126187 14 64652485 to 64652494 9 + TSS region transcription start site region 126187
Kif13b 14 64652490 to 64809618 157128 + protein coding gene kinesin family member 13B
Tssr126188 14 64652503 to 64652521 18 + TSS region transcription start site region 126188
Tssr126189 14 64652524 to 64652555 31 + TSS region transcription start site region 126189
Tssr126190 14 64652559 to 64652582 23 + TSS region transcription start site region 126190
Tssr126191 14 64675417 to 64675453 36 + TSS region transcription start site region 126191
Gm19019 14 64677223 to 64677811 588 + pseudogene predicted gene, 19019
Tssr126192 14 64690687 to 64690691 4 + TSS region transcription start site region 126192
Tbconq1 14 64700000 to 77100000 12400000 QTL trabecular bone connectivity QTL 1
Tssr126193 14 64720319 to 64720323 4 + TSS region transcription start site region 126193
Gm26225 14 64753918 to 64754052 134 + snoRNA gene predicted gene, 26225
Hmbox1 14 64811600 to 64949871 138271 - protein coding gene homeobox containing 1
Tssr129231 14 64813055 to 64813073 18 - TSS region transcription start site region 129231
Gm37183 14 64835855 to 64839259 3404 - unclassified gene predicted gene, 37183
Gm20111 14 64839100 to 64839418 318 + pseudogene predicted gene, 20111
Gm4573 14 64921821 to 64922085 264 + pseudogene predicted gene 4573
Tssr129232 14 64942280 to 64942285 5 - TSS region transcription start site region 129232
Tssr129233 14 64948900 to 64948917 17 - TSS region transcription start site region 129233
Tssr129234 14 64949330 to 64949370 40 - TSS region transcription start site region 129234
Tssr129235 14 64949632 to 64949674 42 - TSS region transcription start site region 129235
Cpgi6624 14 64949673 to 64950192 519 CpG island CpG island 6624
Tssr129236 14 64949730 to 64949751 21 - TSS region transcription start site region 129236
Tssr129237 14 64949814 to 64949820 6 - TSS region transcription start site region 129237
Tssr129238 14 64949838 to 64949886 48 - TSS region transcription start site region 129238
Tssr126194 14 64950037 to 64950056 19 + TSS region transcription start site region 126194
Ints9 14 64950045 to 65039832 89787 + protein coding gene integrator complex subunit 9
Tssr126195 14 64950104 to 64950115 11 + TSS region transcription start site region 126195
Tssr126196 14 64950264 to 64950307 43 + TSS region transcription start site region 126196
Tssr126197 14 64950314 to 64950323 9 + TSS region transcription start site region 126197
Tssr126198 14 64953141 to 64953143 2 + TSS region transcription start site region 126198
Extl3 14 65052060 to 65149855 97795 - protein coding gene exostoses (multiple)-like 3
Cpgi6625 14 65071387 to 65071540 153 CpG island CpG island 6625
Tssr126199 14 65076465 to 65076468 3 + TSS region transcription start site region 126199
Cpgi6626 14 65097396 to 65098440 1044 CpG island CpG island 6626
Tssr129239 14 65098031 to 65098100 69 - TSS region transcription start site region 129239
Tssr126200 14 65100697 to 65100709 12 + TSS region transcription start site region 126200
Cpgi6627 14 65149510 to 65150242 732 CpG island CpG island 6627
Tssr129240 14 65149833 to 65149847 14 - TSS region transcription start site region 129240
Tssr129241 14 65149854 to 65149897 43 - TSS region transcription start site region 129241
Gm48299 14 65166914 to 65167191 277 + pseudogene predicted gene, 48299
Gm30008 14 65171279 to 65174949 3670 - lincRNA gene predicted gene, 30008
Tssr126201 14 65172309 to 65172330 21 + TSS region transcription start site region 126201
Tssr126202 14 65172332 to 65172361 29 + TSS region transcription start site region 126202
Gm41177 14 65172355 to 65185337 12982 + lincRNA gene predicted gene, 41177
Tssr126203 14 65174044 to 65174055 11 + TSS region transcription start site region 126203
Tssr126204 14 65174061 to 65174071 10 + TSS region transcription start site region 126204
Tssr129242 14 65174924 to 65174934 10 - TSS region transcription start site region 129242
Tssr129243 14 65174946 to 65174963 17 - TSS region transcription start site region 129243
Fzd3 14 65192449 to 65262463 70014 - protein coding gene frizzled class receptor 3
Tssr129244 14 65194975 to 65194993 18 - TSS region transcription start site region 129244
Tssr129245 14 65199995 to 65199999 4 - TSS region transcription start site region 129245
Gm27263 14 65206894 to 65206969 75 - unclassified non-coding RNA gene predicted gene, 27263
Gm9086 14 65207119 to 65207731 612 + pseudogene predicted gene 9086
D130009B15Rik 14 65216709 to 65219642 2933 unclassified gene RIKEN cDNA D130009B15 gene
Tssr126205 14 65227700 to 65227705 5 + TSS region transcription start site region 126205
Tssr129246 14 65255879 to 65255883 4 - TSS region transcription start site region 129246
Cpgi6628 14 65261605 to 65262973 1368 CpG island CpG island 6628
Tssr4456 14 65262366 to 65262373 7 - TSS region transcription start site region 4456
Tssr129247 14 65262391 to 65262490 99 - TSS region transcription start site region 129247
Fbxo16 14 65266618 to 65323973 57355 + protein coding gene F-box protein 16
Tssr126206 14 65266680 to 65266692 12 + TSS region transcription start site region 126206
Tssr126207 14 65266704 to 65266752 48 + TSS region transcription start site region 126207
Gm41178 14 65296452 to 65299193 2741 - lncRNA gene predicted gene, 41178
Tssr129248 14 65299348 to 65299386 38 - TSS region transcription start site region 129248
Gm48433 14 65326331 to 65337604 11273 + lincRNA gene predicted gene, 48433
Cpgi6629 14 65331796 to 65332494 698 CpG island CpG island 6629
Cpgi6630 14 65343252 to 65344242 990 CpG island CpG island 6630
Gm48449 14 65351442 to 65359410 7968 - antisense lncRNA gene predicted gene, 48449
Cpgi6631 14 65357957 to 65359382 1425 CpG island CpG island 6631
Tssr126208 14 65358087 to 65358109 22 + TSS region transcription start site region 126208
Tssr126209 14 65358487 to 65358535 48 + TSS region transcription start site region 126209
Tssr126210 14 65358578 to 65358589 11 + TSS region transcription start site region 126210
Tssr126211 14 65358590 to 65358615 25 + TSS region transcription start site region 126211
Tssr126212 14 65358622 to 65358652 30 + TSS region transcription start site region 126212
Tssr126213 14 65358661 to 65358691 30 + TSS region transcription start site region 126213
Zfp395 14 65358676 to 65398930 40254 + protein coding gene zinc finger protein 395
Tssr126214 14 65368843 to 65368849 6 + TSS region transcription start site region 126214
Tssr126215 14 65375339 to 65375386 47 + TSS region transcription start site region 126215
Tssr126216 14 65380718 to 65380736 18 + TSS region transcription start site region 126216
Tssr126217 14 65394774 to 65394793 19 + TSS region transcription start site region 126217
Tssr126218 14 65396634 to 65396650 16 + TSS region transcription start site region 126218
Pnoc 14 65400673 to 65425472 24799 - protein coding gene prepronociceptin
Tssr129249 14 65405186 to 65405192 6 - TSS region transcription start site region 129249
Tssr129250 14 65425169 to 65425188 19 - TSS region transcription start site region 129250
Tssr129251 14 65425453 to 65425466 13 - TSS region transcription start site region 129251
9530047P18Rik 14 65465797 to 65467093 1296 + lncRNA gene RIKEN cDNA 9530047P18 gene
Tssr126219 14 65501526 to 65501530 4 + TSS region transcription start site region 126219
Elp3 14 65530449 to 65593075 62626 - protein coding gene elongator acetyltransferase complex subunit 3
Cpgi6632 14 65592892 to 65593230 338 CpG island CpG island 6632
Tssr129252 14 65593016 to 65593074 58 - TSS region transcription start site region 129252
Tssr129253 14 65593079 to 65593093 14 - TSS region transcription start site region 129253
Nuggc 14 65598546 to 65648531 49985 + protein coding gene nuclear GTPase, germinal center associated
Gm30245 14 65615586 to 65619306 3720 - lncRNA gene predicted gene, 30245
Tssr126220 14 65666394 to 65666416 22 + TSS region transcription start site region 126220
Scara5 14 65666403 to 65764826 98423 + protein coding gene scavenger receptor class A, member 5
Tssr126221 14 65666430 to 65666443 13 + TSS region transcription start site region 126221
Tssr4457 14 65675892 to 65675896 4 + TSS region transcription start site region 4457
Tssr4458 14 65683493 to 65683495 2 + TSS region transcription start site region 4458
Tssr126222 14 65694828 to 65694833 5 + TSS region transcription start site region 126222
Cpgi6633 14 65730542 to 65731217 675 CpG island CpG island 6633
Tssr126223 14 65731032 to 65731053 21 + TSS region transcription start site region 126223
2310075M01Rik 14 65747357 to 65748522 1165 unclassified gene RIKEN cDNA 2310075M01 gene
Cpgi6634 14 65805758 to 65806422 664 CpG island CpG island 6634
Tssr126224 14 65805832 to 65805846 14 + TSS region transcription start site region 126224
Tssr126225 14 65805847 to 65805897 50 + TSS region transcription start site region 126225
Pbk 14 65805911 to 65817822 11911 + protein coding gene PDZ binding kinase
Tssr126226 14 65805912 to 65805930 18 + TSS region transcription start site region 126226
Tssr126227 14 65805951 to 65805967 16 + TSS region transcription start site region 126227
Tssr126228 14 65805983 to 65806030 47 + TSS region transcription start site region 126228
Tssr126229 14 65806044 to 65806065 21 + TSS region transcription start site region 126229
Tssr126230 14 65806066 to 65806084 18 + TSS region transcription start site region 126230
Esco2 14 65819027 to 65833969 14942 - protein coding gene establishment of sister chromatid cohesion N-acetyltransferase 2
Cpgi6635 14 65833411 to 65834187 776 CpG island CpG island 6635
Tssr129254 14 65833851 to 65833866 15 - TSS region transcription start site region 129254
Tssr129255 14 65833889 to 65833905 16 - TSS region transcription start site region 129255
Tssr129256 14 65833912 to 65833931 19 - TSS region transcription start site region 129256
Tssr129257 14 65833940 to 65833952 12 - TSS region transcription start site region 129257
Tssr129258 14 65833963 to 65833974 11 - TSS region transcription start site region 129258
Tssr126231 14 65835148 to 65835157 9 + TSS region transcription start site region 126231
Cpgi6636 14 65837172 to 65837999 827 CpG island CpG island 6636
Ccdc25 14 65837302 to 65866604 29302 + protein coding gene coiled-coil domain containing 25
Tssr126232 14 65837342 to 65837397 55 + TSS region transcription start site region 126232
Tssr126233 14 65837401 to 65837412 11 + TSS region transcription start site region 126233
Tssr126234 14 65837438 to 65837441 3 + TSS region transcription start site region 126234
Tssr126235 14 65856494 to 65856504 10 + TSS region transcription start site region 126235
Cia51 14 65866444 to 68548287 2681843 QTL collagen induced arthritis QTL 51
D14Mit102 14 65866444 to 65866566 122 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 102
Tssr126236 14 65903028 to 65903039 11 + TSS region transcription start site region 126236
Gm41181 14 65903037 to 65914294 11257 + lncRNA gene predicted gene, 41181
Gm41182 14 65914385 to 65927392 13007 + lncRNA gene predicted gene, 41182
Scara3 14 65919394 to 65953930 34536 - protein coding gene scavenger receptor class A, member 3
Cpgi6637 14 65953417 to 65954093 676 CpG island CpG island 6637
Tssr129259 14 65953728 to 65953794 66 - TSS region transcription start site region 129259
Gm19222 14 65961121 to 65962888 1767 - pseudogene predicted gene, 19222
Cpgi6638 14 65968468 to 65969098 630 CpG island CpG island 6638
Clu 14 65968483 to 65981547 13064 + protein coding gene clusterin
Tssr126237 14 65968491 to 65968510 19 + TSS region transcription start site region 126237
Tssr126238 14 65968511 to 65968524 13 + TSS region transcription start site region 126238
Tssr126239 14 65968533 to 65968539 6 + TSS region transcription start site region 126239
Tssr126240 14 65968544 to 65968558 14 + TSS region transcription start site region 126240
Tssr126241 14 65968561 to 65968567 6 + TSS region transcription start site region 126241
Tssr126242 14 65968594 to 65968597 3 + TSS region transcription start site region 126242
Tssr126243 14 65968603 to 65968607 4 + TSS region transcription start site region 126243
Tssr126244 14 65968613 to 65968625 12 + TSS region transcription start site region 126244
Tssr126245 14 65968633 to 65968651 18 + TSS region transcription start site region 126245
Tssr126246 14 65968651 to 65968657 6 + TSS region transcription start site region 126246
Tssr126247 14 65969714 to 65969738 24 + TSS region transcription start site region 126247
Tssr126248 14 65969741 to 65969792 51 + TSS region transcription start site region 126248
Tssr126249 14 65969801 to 65969821 20 + TSS region transcription start site region 126249
Tssr126250 14 65970528 to 65970534 6 + TSS region transcription start site region 126250
Tssr126251 14 65970586 to 65970591 5 + TSS region transcription start site region 126251
Tssr126252 14 65970594 to 65970609 15 + TSS region transcription start site region 126252
Tssr126253 14 65970610 to 65970621 11 + TSS region transcription start site region 126253
Tssr126254 14 65970628 to 65970655 27 + TSS region transcription start site region 126254
Tssr126255 14 65970661 to 65970669 8 + TSS region transcription start site region 126255
Tssr126256 14 65970884 to 65970903 19 + TSS region transcription start site region 126256
Tssr126257 14 65971049 to 65971074 25 + TSS region transcription start site region 126257
Tssr126258 14 65971113 to 65971153 40 + TSS region transcription start site region 126258
Tssr126259 14 65971164 to 65971182 18 + TSS region transcription start site region 126259
Tssr126260 14 65971726 to 65971791 65 + TSS region transcription start site region 126260
Tssr126261 14 65971796 to 65971808 12 + TSS region transcription start site region 126261
Tssr126262 14 65971817 to 65971835 18 + TSS region transcription start site region 126262
Tssr126263 14 65973316 to 65973327 11 + TSS region transcription start site region 126263
Tssr126264 14 65973336 to 65973368 32 + TSS region transcription start site region 126264
Tssr129260 14 65973351 to 65973359 8 - TSS region transcription start site region 129260
Tssr129261 14 65973360 to 65973398 38 - TSS region transcription start site region 129261
Tssr126265 14 65973377 to 65973396 19 + TSS region transcription start site region 126265
Tssr129262 14 65973400 to 65973411 11 - TSS region transcription start site region 129262
Tssr129263 14 65973413 to 65973427 14 - TSS region transcription start site region 129263
Tssr126266 14 65973421 to 65973435 14 + TSS region transcription start site region 126266
Tssr129264 14 65973454 to 65973480 26 - TSS region transcription start site region 129264
Tssr126267 14 65974253 to 65974262 9 + TSS region transcription start site region 126267
Tssr126268 14 65974837 to 65974916 79 + TSS region transcription start site region 126268
Tssr129265 14 65974861 to 65974894 33 - TSS region transcription start site region 129265
Tssr129266 14 65974896 to 65974927 31 - TSS region transcription start site region 129266
Tssr126269 14 65974923 to 65974978 55 + TSS region transcription start site region 126269
Tssr129267 14 65974928 to 65974943 15 - TSS region transcription start site region 129267
Tssr129268 14 65974990 to 65975009 19 - TSS region transcription start site region 129268
Tssr126270 14 65975582 to 65975593 11 + TSS region transcription start site region 126270
Tssr126271 14 65975600 to 65975620 20 + TSS region transcription start site region 126271
Tssr126272 14 65975625 to 65975636 11 + TSS region transcription start site region 126272
Tssr126273 14 65975652 to 65975659 7 + TSS region transcription start site region 126273
Tssr126274 14 65975696 to 65975703 7 + TSS region transcription start site region 126274