Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:64002271-65302958

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153 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rp1l1 14 63992431 to 64033506 41075 + protein coding gene retinitis pigmentosa 1 homolog like 1
D14Mit235 14 64052218 to 64052338 120 DNA segment DNA Segment, Chr 14, Massachusetts Institute of Technology 235
Tssr126149 14 64072031 to 64072038 7 + TSS region transcription start site region 126149
Prss55 14 64075435 to 64085433 9998 - protein coding gene protease, serine 55
Tssr129206 14 64085400 to 64085415 15 - TSS region transcription start site region 129206
Tssr126150 14 64085507 to 64085521 14 + TSS region transcription start site region 126150
Prss51 14 64086234 to 64097678 11444 + protein coding gene protease, serine 51
Tssr126151 14 64093682 to 64093712 30 + TSS region transcription start site region 126151
Tssr126152 14 64093713 to 64093737 24 + TSS region transcription start site region 126152
4930471C04Rik 14 64099295 to 64104235 4940 - lincRNA gene RIKEN cDNA 4930471C04 gene
Tssr129207 14 64104229 to 64104238 9 - TSS region transcription start site region 129207
Tssr126153 14 64104316 to 64104328 12 + TSS region transcription start site region 126153
Prss52 14 64104323 to 64113751 9428 + protein coding gene protease, serine 52
Tssr4451 14 64104338 to 64104340 2 + TSS region transcription start site region 4451
Gm17116 14 64111200 to 64114641 3441 - antisense lncRNA gene predicted gene 17116
9630015K15Rik 14 64116314 to 64127605 11291 + antisense lncRNA gene RIKEN cDNA 9630015K15 gene
Msra 14 64122625 to 64455903 333278 - protein coding gene methionine sulfoxide reductase A
5230401M06Rik 14 64138546 to 64139825 1279 unclassified gene RIKEN cDNA 5230401M06 gene
Tssr129208 14 64146883 to 64146885 2 - TSS region transcription start site region 129208
Tssr129209 14 64174610 to 64174633 23 - TSS region transcription start site region 129209
Tssr129210 14 64174676 to 64174690 14 - TSS region transcription start site region 129210
Tssr4452 14 64176436 to 64176440 4 + TSS region transcription start site region 4452
1700044K19Rik 14 64185461 to 64185974 513 unclassified gene RIKEN cDNA 1700044K19 gene
Gm41176 14 64272290 to 64280235 7945 + lncRNA gene predicted gene, 41176
Tssr126154 14 64323980 to 64323985 5 + TSS region transcription start site region 126154
Tssr129211 14 64327577 to 64327597 20 - TSS region transcription start site region 129211
Tssr129212 14 64403662 to 64403665 3 - TSS region transcription start site region 129212
Tssr129213 14 64413498 to 64413501 3 - TSS region transcription start site region 129213
Tssr129214 14 64417041 to 64417047 6 - TSS region transcription start site region 129214
Tssr129215 14 64417135 to 64417162 27 - TSS region transcription start site region 129215
Tssr129216 14 64417781 to 64417790 9 - TSS region transcription start site region 129216
Tssr129217 14 64417801 to 64417833 32 - TSS region transcription start site region 129217
Tssr129218 14 64419522 to 64419536 14 - TSS region transcription start site region 129218
Tssr129219 14 64434182 to 64434226 44 - TSS region transcription start site region 129219
Tssr126155 14 64434371 to 64434391 20 + TSS region transcription start site region 126155
Tssr129220 14 64439807 to 64439811 4 - TSS region transcription start site region 129220
Tssr126156 14 64440157 to 64440179 22 + TSS region transcription start site region 126156
Cpgi6620 14 64440313 to 64441135 822 CpG island CpG island 6620
Tssr4453 14 64440467 to 64440485 18 - TSS region transcription start site region 4453
Tssr129221 14 64440487 to 64440509 22 - TSS region transcription start site region 129221
Tssr126157 14 64440666 to 64440720 54 + TSS region transcription start site region 126157
Tssr126158 14 64440726 to 64440747 21 + TSS region transcription start site region 126158
Tssr129222 14 64440797 to 64440802 5 - TSS region transcription start site region 129222
Tssr129223 14 64440813 to 64440820 7 - TSS region transcription start site region 129223
Tssr4454 14 64440843 to 64440846 3 - TSS region transcription start site region 4454
Tssr129224 14 64440848 to 64440863 15 - TSS region transcription start site region 129224
Tssr129225 14 64440868 to 64440923 55 - TSS region transcription start site region 129225
Tssr129226 14 64440934 to 64440955 21 - TSS region transcription start site region 129226
Tssr129227 14 64440964 to 64440981 17 - TSS region transcription start site region 129227
Tssr4455 14 64441020 to 64441029 9 - TSS region transcription start site region 4455
Tssr129228 14 64441034 to 64441045 11 - TSS region transcription start site region 129228
Tssr126159 14 64441094 to 64441096 2 + TSS region transcription start site region 126159
Tssr129229 14 64441856 to 64441861 5 - TSS region transcription start site region 129229
Gm47202 14 64530952 to 64537538 6586 - lincRNA gene predicted gene, 47202
Tssr126160 14 64574364 to 64574426 62 + TSS region transcription start site region 126160
Tssr129230 14 64576114 to 64576138 24 - TSS region transcription start site region 129230
Tssr126161 14 64580759 to 64580770 11 + TSS region transcription start site region 126161
Tssr126162 14 64583715 to 64583742 27 + TSS region transcription start site region 126162
Cpgi6621 14 64586821 to 64587957 1136 CpG island CpG island 6621
Tssr126163 14 64587173 to 64587191 18 + TSS region transcription start site region 126163
Tssr126164 14 64587289 to 64587305 16 + TSS region transcription start site region 126164
Tssr126165 14 64587323 to 64587336 13 + TSS region transcription start site region 126165
Tssr126166 14 64587360 to 64587372 12 + TSS region transcription start site region 126166
Tssr126167 14 64587384 to 64587434 50 + TSS region transcription start site region 126167
Tssr126168 14 64587478 to 64587489 11 + TSS region transcription start site region 126168
Tssr126169 14 64588014 to 64588058 44 + TSS region transcription start site region 126169
Tssr126170 14 64588098 to 64588108 10 + TSS region transcription start site region 126170
Tssr126171 14 64588112 to 64588120 8 + TSS region transcription start site region 126171
Mir124a-1hg 14 64588115 to 64593961 5846 + lincRNA gene Mir124-1 host gene (non-protein coding)
Tssr126172 14 64588122 to 64588136 14 + TSS region transcription start site region 126172
Tssr126173 14 64588278 to 64588289 11 + TSS region transcription start site region 126173
Tssr126174 14 64588336 to 64588361 25 + TSS region transcription start site region 126174
Tssr126175 14 64588545 to 64588559 14 + TSS region transcription start site region 126175
Tssr126176 14 64589689 to 64589753 64 + TSS region transcription start site region 126176
Tssr126177 14 64589802 to 64589848 46 + TSS region transcription start site region 126177
Cpgi6622 14 64589821 to 64590932 1111 CpG island CpG island 6622
Tssr126178 14 64589861 to 64589898 37 + TSS region transcription start site region 126178
Tssr126179 14 64589900 to 64589910 10 + TSS region transcription start site region 126179
Tssr126180 14 64590294 to 64590307 13 + TSS region transcription start site region 126180
Tssr126181 14 64590378 to 64590389 11 + TSS region transcription start site region 126181
Tssr126182 14 64590404 to 64590426 22 + TSS region transcription start site region 126182
Tssr126183 14 64590438 to 64590452 14 + TSS region transcription start site region 126183
Tssr126184 14 64590461 to 64590473 12 + TSS region transcription start site region 126184
Tssr126185 14 64590481 to 64590488 7 + TSS region transcription start site region 126185
Mir124a-1 14 64590657 to 64590741 84 + miRNA gene microRNA 124a-1
Tssr126186 14 64590729 to 64590732 3 + TSS region transcription start site region 126186
Mir3078 14 64591185 to 64591271 86 + miRNA gene microRNA 3078
Gm36924 14 64624577 to 64638185 13608 + lncRNA gene predicted gene, 36924
Cpgi6623 14 64652271 to 64652958 687 CpG island CpG island 6623
Tssr126187 14 64652485 to 64652494 9 + TSS region transcription start site region 126187
Kif13b 14 64652490 to 64809618 157128 + protein coding gene kinesin family member 13B
Tssr126188 14 64652503 to 64652521 18 + TSS region transcription start site region 126188
Tssr126189 14 64652524 to 64652555 31 + TSS region transcription start site region 126189
Tssr126190 14 64652559 to 64652582 23 + TSS region transcription start site region 126190
Tssr126191 14 64675417 to 64675453 36 + TSS region transcription start site region 126191
Gm19019 14 64677223 to 64677811 588 + pseudogene predicted gene, 19019
Tssr126192 14 64690687 to 64690691 4 + TSS region transcription start site region 126192
Tbconq1 14 64700000 to 77100000 12400000 QTL trabecular bone connectivity QTL 1
Tssr126193 14 64720319 to 64720323 4 + TSS region transcription start site region 126193
Gm26225 14 64753918 to 64754052 134 + snoRNA gene predicted gene, 26225
Hmbox1 14 64811600 to 64949871 138271 - protein coding gene homeobox containing 1
Tssr129231 14 64813055 to 64813073 18 - TSS region transcription start site region 129231
Gm37183 14 64835855 to 64839259 3404 - unclassified gene predicted gene, 37183
Gm20111 14 64839100 to 64839418 318 + pseudogene predicted gene, 20111
Gm4573 14 64921821 to 64922085 264 + pseudogene predicted gene 4573
Tssr129232 14 64942280 to 64942285 5 - TSS region transcription start site region 129232
Tssr129233 14 64948900 to 64948917 17 - TSS region transcription start site region 129233
Tssr129234 14 64949330 to 64949370 40 - TSS region transcription start site region 129234
Tssr129235 14 64949632 to 64949674 42 - TSS region transcription start site region 129235
Cpgi6624 14 64949673 to 64950192 519 CpG island CpG island 6624
Tssr129236 14 64949730 to 64949751 21 - TSS region transcription start site region 129236
Tssr129237 14 64949814 to 64949820 6 - TSS region transcription start site region 129237
Tssr129238 14 64949838 to 64949886 48 - TSS region transcription start site region 129238
Tssr126194 14 64950037 to 64950056 19 + TSS region transcription start site region 126194
Ints9 14 64950045 to 65039832 89787 + protein coding gene integrator complex subunit 9
Tssr126195 14 64950104 to 64950115 11 + TSS region transcription start site region 126195
Tssr126196 14 64950264 to 64950307 43 + TSS region transcription start site region 126196
Tssr126197 14 64950314 to 64950323 9 + TSS region transcription start site region 126197
Tssr126198 14 64953141 to 64953143 2 + TSS region transcription start site region 126198
Extl3 14 65052060 to 65149855 97795 - protein coding gene exostoses (multiple)-like 3
Cpgi6625 14 65071387 to 65071540 153 CpG island CpG island 6625
Tssr126199 14 65076465 to 65076468 3 + TSS region transcription start site region 126199
Cpgi6626 14 65097396 to 65098440 1044 CpG island CpG island 6626
Tssr129239 14 65098031 to 65098100 69 - TSS region transcription start site region 129239
Tssr126200 14 65100697 to 65100709 12 + TSS region transcription start site region 126200
Cpgi6627 14 65149510 to 65150242 732 CpG island CpG island 6627
Tssr129240 14 65149833 to 65149847 14 - TSS region transcription start site region 129240
Tssr129241 14 65149854 to 65149897 43 - TSS region transcription start site region 129241
Gm48299 14 65166914 to 65167191 277 + pseudogene predicted gene, 48299
Gm30008 14 65171279 to 65174949 3670 - lincRNA gene predicted gene, 30008
Tssr126201 14 65172309 to 65172330 21 + TSS region transcription start site region 126201
Tssr126202 14 65172332 to 65172361 29 + TSS region transcription start site region 126202
Gm41177 14 65172355 to 65185337 12982 + lincRNA gene predicted gene, 41177
Tssr126203 14 65174044 to 65174055 11 + TSS region transcription start site region 126203
Tssr126204 14 65174061 to 65174071 10 + TSS region transcription start site region 126204
Tssr129242 14 65174924 to 65174934 10 - TSS region transcription start site region 129242
Tssr129243 14 65174946 to 65174963 17 - TSS region transcription start site region 129243
Fzd3 14 65192449 to 65262463 70014 - protein coding gene frizzled class receptor 3
Tssr129244 14 65194975 to 65194993 18 - TSS region transcription start site region 129244
Tssr129245 14 65199995 to 65199999 4 - TSS region transcription start site region 129245
Gm27263 14 65206894 to 65206969 75 - unclassified non-coding RNA gene predicted gene, 27263
Gm9086 14 65207119 to 65207731 612 + pseudogene predicted gene 9086
D130009B15Rik 14 65216709 to 65219642 2933 unclassified gene RIKEN cDNA D130009B15 gene
Tssr126205 14 65227700 to 65227705 5 + TSS region transcription start site region 126205
Tssr129246 14 65255879 to 65255883 4 - TSS region transcription start site region 129246
Cpgi6628 14 65261605 to 65262973 1368 CpG island CpG island 6628
Tssr4456 14 65262366 to 65262373 7 - TSS region transcription start site region 4456
Tssr129247 14 65262391 to 65262490 99 - TSS region transcription start site region 129247
Fbxo16 14 65266618 to 65323973 57355 + protein coding gene F-box protein 16
Tssr126206 14 65266680 to 65266692 12 + TSS region transcription start site region 126206
Tssr126207 14 65266704 to 65266752 48 + TSS region transcription start site region 126207
Gm41178 14 65296452 to 65299193 2741 - lncRNA gene predicted gene, 41178
Tssr129248 14 65299348 to 65299386 38 - TSS region transcription start site region 129248