Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:63523734-64195137

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72 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mtmr9 14 63521743 to 63544050 22307 - protein coding gene myotubularin related protein 9
Cpgi6612 14 63543345 to 63544377 1032 CpG island CpG island 6612
Tssr129197 14 63543658 to 63543683 25 - TSS region transcription start site region 129197
Tssr129198 14 63543685 to 63543747 62 - TSS region transcription start site region 129198
Tssr129199 14 63543882 to 63543890 8 - TSS region transcription start site region 129199
Tssr129200 14 63543914 to 63543925 11 - TSS region transcription start site region 129200
Tssr129201 14 63543931 to 63543991 60 - TSS region transcription start site region 129201
Tssr129202 14 63543999 to 63544014 15 - TSS region transcription start site region 129202
Gm15918 14 63602524 to 63607372 4848 - antisense lncRNA gene predicted gene 15918
Cpgi6613 14 63605966 to 63607755 1789 CpG island CpG island 6613
Tssr126134 14 63606043 to 63606077 34 + TSS region transcription start site region 126134
Tssr126135 14 63606387 to 63606408 21 + TSS region transcription start site region 126135
Tssr126136 14 63606491 to 63606527 36 + TSS region transcription start site region 126136
Xkr6 14 63606530 to 63820411 213881 + protein coding gene X-linked Kx blood group related 6
Tssr126137 14 63607014 to 63607029 15 + TSS region transcription start site region 126137
Gm38524 14 63622640 to 63666182 43542 + lncRNA gene predicted gene, 38524
D14Mit88 14 63657170 to 63657315 145 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 88
Mir598 14 63727189 to 63727267 78 + miRNA gene microRNA 598
Gm36218 14 63738569 to 63742436 3867 - lncRNA gene predicted gene, 36218
Cpgi6614 14 63743407 to 63743834 427 CpG island CpG island 6614
Tssr126138 14 63748318 to 63748323 5 + TSS region transcription start site region 126138
Cpgi6615 14 63783597 to 63783833 236 CpG island CpG island 6615
Tssr126139 14 63783658 to 63783667 9 + TSS region transcription start site region 126139
Gm41175 14 63803720 to 63826134 22414 - lncRNA gene predicted gene, 41175
Tssr126140 14 63814645 to 63814646 1 + TSS region transcription start site region 126140
Cpgi6616 14 63818984 to 63819753 769 CpG island CpG island 6616
Tssr126141 14 63819741 to 63819754 13 + TSS region transcription start site region 126141
Tssr4450 14 63835092 to 63835102 10 + TSS region transcription start site region 4450
Gm20081 14 63854209 to 63855605 1396 unclassified non-coding RNA gene predicted gene, 20081
4921532D01Rik 14 63858734 to 63860137 1403 - lncRNA gene RIKEN cDNA 4921532D01 gene
Cpgi6617 14 63859852 to 63860837 985 CpG island CpG island 6617
Tssr129203 14 63860268 to 63860293 25 - TSS region transcription start site region 129203
Tssr126142 14 63860290 to 63860361 71 + TSS region transcription start site region 126142
Pinx1 14 63860364 to 63919859 59495 + protein coding gene PIN2/TERF1 interacting, telomerase inhibitor 1
Tssr126143 14 63899742 to 63899791 49 + TSS region transcription start site region 126143
Cpgi6618 14 63942678 to 63944329 1651 CpG island CpG island 6618
Tssr126144 14 63943666 to 63943687 21 + TSS region transcription start site region 126144
Sox7 14 63943706 to 63950732 7026 + protein coding gene SRY (sex determining region Y)-box 7
Tssr126145 14 63943932 to 63943952 20 + TSS region transcription start site region 126145
Cpgi6619 14 63947910 to 63948160 250 CpG island CpG island 6619
4930578I06Rik 14 63971121 to 63987780 16659 - protein coding gene RIKEN cDNA 4930578I06 gene
Gm36410 14 63981937 to 63985935 3998 + lncRNA gene predicted gene, 36410
D14Mit31 14 63984558 to 63984671 113 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 31
Gm10867 14 63987612 to 63992036 4424 unclassified gene predicted gene 10867
Tssr129204 14 63987739 to 63987767 28 - TSS region transcription start site region 129204
Tssr129205 14 63987774 to 63987793 19 - TSS region transcription start site region 129205
Tssr126146 14 63992425 to 63992443 18 + TSS region transcription start site region 126146
Rp1l1 14 63992431 to 64033506 41075 + protein coding gene retinitis pigmentosa 1 homolog like 1
Tssr126147 14 63992444 to 63992455 11 + TSS region transcription start site region 126147
Tssr126148 14 63992467 to 63992479 12 + TSS region transcription start site region 126148
D14Mit235 14 64052218 to 64052338 120 DNA segment DNA Segment, Chr 14, Massachusetts Institute of Technology 235
Tssr126149 14 64072031 to 64072038 7 + TSS region transcription start site region 126149
Prss55 14 64075435 to 64085433 9998 - protein coding gene protease, serine 55
Tssr129206 14 64085400 to 64085415 15 - TSS region transcription start site region 129206
Tssr126150 14 64085507 to 64085521 14 + TSS region transcription start site region 126150
Prss51 14 64086234 to 64097678 11444 + protein coding gene protease, serine 51
Tssr126151 14 64093682 to 64093712 30 + TSS region transcription start site region 126151
Tssr126152 14 64093713 to 64093737 24 + TSS region transcription start site region 126152
4930471C04Rik 14 64099295 to 64104235 4940 - lincRNA gene RIKEN cDNA 4930471C04 gene
Tssr129207 14 64104229 to 64104238 9 - TSS region transcription start site region 129207
Tssr126153 14 64104316 to 64104328 12 + TSS region transcription start site region 126153
Prss52 14 64104323 to 64113751 9428 + protein coding gene protease, serine 52
Tssr4451 14 64104338 to 64104340 2 + TSS region transcription start site region 4451
Gm17116 14 64111200 to 64114641 3441 - antisense lncRNA gene predicted gene 17116
9630015K15Rik 14 64116314 to 64127605 11291 + antisense lncRNA gene RIKEN cDNA 9630015K15 gene
Msra 14 64122625 to 64455903 333278 - protein coding gene methionine sulfoxide reductase A
5230401M06Rik 14 64138546 to 64139825 1279 unclassified gene RIKEN cDNA 5230401M06 gene
Tssr129208 14 64146883 to 64146885 2 - TSS region transcription start site region 129208
Tssr129209 14 64174610 to 64174633 23 - TSS region transcription start site region 129209
Tssr129210 14 64174676 to 64174690 14 - TSS region transcription start site region 129210
Tssr4452 14 64176436 to 64176440 4 + TSS region transcription start site region 4452
1700044K19Rik 14 64185461 to 64185974 513 unclassified gene RIKEN cDNA 1700044K19 gene