Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:63251490-63621525

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73 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gata4 14 63198922 to 63271692 72770 - protein coding gene GATA binding protein 4
Cpgi6605 14 63251494 to 63251980 486 CpG island CpG island 6605
Cpgi6606 14 63255517 to 63256501 984 CpG island CpG island 6606
Tssr129171 14 63256597 to 63256632 35 - TSS region transcription start site region 129171
Cpgi6607 14 63268040 to 63268917 877 CpG island CpG island 6607
Tssr126122 14 63269168 to 63269180 12 + TSS region transcription start site region 126122
Tssr129172 14 63271622 to 63271647 25 - TSS region transcription start site region 129172
Tssr129173 14 63271654 to 63271679 25 - TSS region transcription start site region 129173
Tssr129174 14 63271682 to 63271702 20 - TSS region transcription start site region 129174
Tssr129175 14 63271708 to 63271723 15 - TSS region transcription start site region 129175
Tssr129176 14 63271823 to 63271850 27 - TSS region transcription start site region 129176
Tssr129177 14 63271854 to 63271881 27 - TSS region transcription start site region 129177
Gm4151 14 63308919 to 63358503 49584 + unclassified gene predicted gene 4151
Tssr126123 14 63317713 to 63317731 18 + TSS region transcription start site region 126123
Tssr126124 14 63317732 to 63317748 16 + TSS region transcription start site region 126124
Gm49390 14 63317745 to 63336957 19212 + lincRNA gene predicted gene, 49390
Tssr129178 14 63321532 to 63321543 11 - TSS region transcription start site region 129178
Tssr129179 14 63321544 to 63321551 7 - TSS region transcription start site region 129179
Tssr129180 14 63321564 to 63321569 5 - TSS region transcription start site region 129180
Gm5463 14 63329220 to 63345635 16415 + lincRNA gene predicted gene 5463
Cpgi6608 14 63338515 to 63338699 184 CpG island CpG island 6608
Tssr126125 14 63339966 to 63339972 6 + TSS region transcription start site region 126125
Tssr129181 14 63349524 to 63349526 2 - TSS region transcription start site region 129181
Gm36165 14 63358672 to 63373196 14524 + lncRNA gene predicted gene, 36165
Gm46458 14 63360335 to 63371584 11249 - lncRNA gene predicted gene, 46458
Tssr126126 14 63370609 to 63370622 13 + TSS region transcription start site region 126126
Tssr129182 14 63371142 to 63371153 11 - TSS region transcription start site region 129182
Blk 14 63372836 to 63417037 44201 - protein coding gene B lymphoid kinase
Tssr129183 14 63377871 to 63377898 27 - TSS region transcription start site region 129183
Tssr129184 14 63405228 to 63405241 13 - TSS region transcription start site region 129184
Tssr129185 14 63405251 to 63405262 11 - TSS region transcription start site region 129185
Tssr129186 14 63416817 to 63416845 28 - TSS region transcription start site region 129186
Tssr126127 14 63416975 to 63416982 7 + TSS region transcription start site region 126127
Tssr129187 14 63417029 to 63417059 30 - TSS region transcription start site region 129187
Tssr129188 14 63417073 to 63417084 11 - TSS region transcription start site region 129188
Tssr129189 14 63417125 to 63417138 13 - TSS region transcription start site region 129189
Tssr129190 14 63418447 to 63418474 27 - TSS region transcription start site region 129190
Tssr129191 14 63418820 to 63418835 15 - TSS region transcription start site region 129191
Tssr129192 14 63419539 to 63419567 28 - TSS region transcription start site region 129192
Gm21430 14 63428733 to 63429730 997 - pseudogene predicted gene, 21430
Cpgi6609 14 63435672 to 63436795 1123 CpG island CpG island 6609
Fam167a 14 63436394 to 63465498 29104 + protein coding gene family with sequence similarity 167, member A
Tssr129193 14 63436431 to 63436440 9 - TSS region transcription start site region 129193
Tssr126128 14 63436490 to 63436525 35 + TSS region transcription start site region 126128
Tssr126129 14 63436531 to 63436548 17 + TSS region transcription start site region 126129
Tssr129194 14 63438068 to 63438082 14 - TSS region transcription start site region 129194
D14Mit1003 14 63442735 to 63442878 143 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 1003
Tssr126130 14 63451457 to 63451469 12 + TSS region transcription start site region 126130
Tssr126131 14 63451472 to 63451501 29 + TSS region transcription start site region 126131
Gm47074 14 63475117 to 63475376 259 - pseudogene predicted gene, 47074
Tdh 14 63492347 to 63509092 16745 - protein coding gene L-threonine dehydrogenase
Cpgi6610 14 63493589 to 63494032 443 CpG island CpG island 6610
Tssr126132 14 63493673 to 63493681 8 + TSS region transcription start site region 126132
Tssr126133 14 63493688 to 63493702 14 + TSS region transcription start site region 126133
Gm17232 14 63493993 to 63499868 5875 + antisense lncRNA gene predicted gene 17232
Tssr129195 14 63500163 to 63500190 27 - TSS region transcription start site region 129195
Cpgi6611 14 63508491 to 63509006 515 CpG island CpG island 6611
Tssr129196 14 63508766 to 63508773 7 - TSS region transcription start site region 129196
Mtmr9 14 63521743 to 63544050 22307 - protein coding gene myotubularin related protein 9
Cpgi6612 14 63543345 to 63544377 1032 CpG island CpG island 6612
Tssr129197 14 63543658 to 63543683 25 - TSS region transcription start site region 129197
Tssr129198 14 63543685 to 63543747 62 - TSS region transcription start site region 129198
Tssr129199 14 63543882 to 63543890 8 - TSS region transcription start site region 129199
Tssr129200 14 63543914 to 63543925 11 - TSS region transcription start site region 129200
Tssr129201 14 63543931 to 63543991 60 - TSS region transcription start site region 129201
Tssr129202 14 63543999 to 63544014 15 - TSS region transcription start site region 129202
Gm15918 14 63602524 to 63607372 4848 - antisense lncRNA gene predicted gene 15918
Cpgi6613 14 63605966 to 63607755 1789 CpG island CpG island 6613
Tssr126134 14 63606043 to 63606077 34 + TSS region transcription start site region 126134
Tssr126135 14 63606387 to 63606408 21 + TSS region transcription start site region 126135
Tssr126136 14 63606491 to 63606527 36 + TSS region transcription start site region 126136
Xkr6 14 63606530 to 63820411 213881 + protein coding gene X-linked Kx blood group related 6
Tssr126137 14 63607014 to 63607029 15 + TSS region transcription start site region 126137