Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:63245797-65635802

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292 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gata4 14 63198922 to 63271692 72770 - protein coding gene GATA binding protein 4
Cpgi6603 14 63245025 to 63246157 1132 CpG island CpG island 6603
Cpgi6604 14 63246386 to 63246714 328 CpG island CpG island 6604
Tssr126121 14 63248043 to 63248063 20 + TSS region transcription start site region 126121
Cpgi6605 14 63251494 to 63251980 486 CpG island CpG island 6605
Cpgi6606 14 63255517 to 63256501 984 CpG island CpG island 6606
Tssr129171 14 63256597 to 63256632 35 - TSS region transcription start site region 129171
Cpgi6607 14 63268040 to 63268917 877 CpG island CpG island 6607
Tssr126122 14 63269168 to 63269180 12 + TSS region transcription start site region 126122
Tssr129172 14 63271622 to 63271647 25 - TSS region transcription start site region 129172
Tssr129173 14 63271654 to 63271679 25 - TSS region transcription start site region 129173
Tssr129174 14 63271682 to 63271702 20 - TSS region transcription start site region 129174
Tssr129175 14 63271708 to 63271723 15 - TSS region transcription start site region 129175
Tssr129176 14 63271823 to 63271850 27 - TSS region transcription start site region 129176
Tssr129177 14 63271854 to 63271881 27 - TSS region transcription start site region 129177
Gm4151 14 63308919 to 63358503 49584 + unclassified gene predicted gene 4151
Tssr126123 14 63317713 to 63317731 18 + TSS region transcription start site region 126123
Tssr126124 14 63317732 to 63317748 16 + TSS region transcription start site region 126124
Gm49390 14 63317745 to 63336957 19212 + lincRNA gene predicted gene, 49390
Tssr129178 14 63321532 to 63321543 11 - TSS region transcription start site region 129178
Tssr129179 14 63321544 to 63321551 7 - TSS region transcription start site region 129179
Tssr129180 14 63321564 to 63321569 5 - TSS region transcription start site region 129180
Gm5463 14 63329220 to 63345635 16415 + lincRNA gene predicted gene 5463
Cpgi6608 14 63338515 to 63338699 184 CpG island CpG island 6608
Tssr126125 14 63339966 to 63339972 6 + TSS region transcription start site region 126125
Tssr129181 14 63349524 to 63349526 2 - TSS region transcription start site region 129181
Gm36165 14 63358672 to 63373196 14524 + lncRNA gene predicted gene, 36165
Gm46458 14 63360335 to 63371584 11249 - lncRNA gene predicted gene, 46458
Tssr126126 14 63370609 to 63370622 13 + TSS region transcription start site region 126126
Tssr129182 14 63371142 to 63371153 11 - TSS region transcription start site region 129182
Blk 14 63372836 to 63417037 44201 - protein coding gene B lymphoid kinase
Tssr129183 14 63377871 to 63377898 27 - TSS region transcription start site region 129183
Tssr129184 14 63405228 to 63405241 13 - TSS region transcription start site region 129184
Tssr129185 14 63405251 to 63405262 11 - TSS region transcription start site region 129185
Tssr129186 14 63416817 to 63416845 28 - TSS region transcription start site region 129186
Tssr126127 14 63416975 to 63416982 7 + TSS region transcription start site region 126127
Tssr129187 14 63417029 to 63417059 30 - TSS region transcription start site region 129187
Tssr129188 14 63417073 to 63417084 11 - TSS region transcription start site region 129188
Tssr129189 14 63417125 to 63417138 13 - TSS region transcription start site region 129189
Tssr129190 14 63418447 to 63418474 27 - TSS region transcription start site region 129190
Tssr129191 14 63418820 to 63418835 15 - TSS region transcription start site region 129191
Tssr129192 14 63419539 to 63419567 28 - TSS region transcription start site region 129192
Gm21430 14 63428733 to 63429730 997 - pseudogene predicted gene, 21430
Cpgi6609 14 63435672 to 63436795 1123 CpG island CpG island 6609
Fam167a 14 63436394 to 63465498 29104 + protein coding gene family with sequence similarity 167, member A
Tssr129193 14 63436431 to 63436440 9 - TSS region transcription start site region 129193
Tssr126128 14 63436490 to 63436525 35 + TSS region transcription start site region 126128
Tssr126129 14 63436531 to 63436548 17 + TSS region transcription start site region 126129
Tssr129194 14 63438068 to 63438082 14 - TSS region transcription start site region 129194
D14Mit1003 14 63442735 to 63442878 143 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 1003
Tssr126130 14 63451457 to 63451469 12 + TSS region transcription start site region 126130
Tssr126131 14 63451472 to 63451501 29 + TSS region transcription start site region 126131
Gm47074 14 63475117 to 63475376 259 - pseudogene predicted gene, 47074
Tdh 14 63492347 to 63509092 16745 - protein coding gene L-threonine dehydrogenase
Cpgi6610 14 63493589 to 63494032 443 CpG island CpG island 6610
Tssr126132 14 63493673 to 63493681 8 + TSS region transcription start site region 126132
Tssr126133 14 63493688 to 63493702 14 + TSS region transcription start site region 126133
Gm17232 14 63493993 to 63499868 5875 + antisense lncRNA gene predicted gene 17232
Tssr129195 14 63500163 to 63500190 27 - TSS region transcription start site region 129195
Cpgi6611 14 63508491 to 63509006 515 CpG island CpG island 6611
Tssr129196 14 63508766 to 63508773 7 - TSS region transcription start site region 129196
Mtmr9 14 63521743 to 63544050 22307 - protein coding gene myotubularin related protein 9
Cpgi6612 14 63543345 to 63544377 1032 CpG island CpG island 6612
Tssr129197 14 63543658 to 63543683 25 - TSS region transcription start site region 129197
Tssr129198 14 63543685 to 63543747 62 - TSS region transcription start site region 129198
Tssr129199 14 63543882 to 63543890 8 - TSS region transcription start site region 129199
Tssr129200 14 63543914 to 63543925 11 - TSS region transcription start site region 129200
Tssr129201 14 63543931 to 63543991 60 - TSS region transcription start site region 129201
Tssr129202 14 63543999 to 63544014 15 - TSS region transcription start site region 129202
Gm15918 14 63602524 to 63607372 4848 - antisense lncRNA gene predicted gene 15918
Cpgi6613 14 63605966 to 63607755 1789 CpG island CpG island 6613
Tssr126134 14 63606043 to 63606077 34 + TSS region transcription start site region 126134
Tssr126135 14 63606387 to 63606408 21 + TSS region transcription start site region 126135
Tssr126136 14 63606491 to 63606527 36 + TSS region transcription start site region 126136
Xkr6 14 63606530 to 63820411 213881 + protein coding gene X-linked Kx blood group related 6
Tssr126137 14 63607014 to 63607029 15 + TSS region transcription start site region 126137
Gm38524 14 63622640 to 63666182 43542 + lncRNA gene predicted gene, 38524
D14Mit88 14 63657170 to 63657315 145 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 88
Mir598 14 63727189 to 63727267 78 + miRNA gene microRNA 598
Gm36218 14 63738569 to 63742436 3867 - lncRNA gene predicted gene, 36218
Cpgi6614 14 63743407 to 63743834 427 CpG island CpG island 6614
Tssr126138 14 63748318 to 63748323 5 + TSS region transcription start site region 126138
Cpgi6615 14 63783597 to 63783833 236 CpG island CpG island 6615
Tssr126139 14 63783658 to 63783667 9 + TSS region transcription start site region 126139
Gm41175 14 63803720 to 63826134 22414 - lncRNA gene predicted gene, 41175
Tssr126140 14 63814645 to 63814646 1 + TSS region transcription start site region 126140
Cpgi6616 14 63818984 to 63819753 769 CpG island CpG island 6616
Tssr126141 14 63819741 to 63819754 13 + TSS region transcription start site region 126141
Tssr4450 14 63835092 to 63835102 10 + TSS region transcription start site region 4450
Gm20081 14 63854209 to 63855605 1396 unclassified non-coding RNA gene predicted gene, 20081
4921532D01Rik 14 63858734 to 63860137 1403 - lncRNA gene RIKEN cDNA 4921532D01 gene
Cpgi6617 14 63859852 to 63860837 985 CpG island CpG island 6617
Tssr129203 14 63860268 to 63860293 25 - TSS region transcription start site region 129203
Tssr126142 14 63860290 to 63860361 71 + TSS region transcription start site region 126142
Pinx1 14 63860364 to 63919859 59495 + protein coding gene PIN2/TERF1 interacting, telomerase inhibitor 1
Tssr126143 14 63899742 to 63899791 49 + TSS region transcription start site region 126143
Cpgi6618 14 63942678 to 63944329 1651 CpG island CpG island 6618
Tssr126144 14 63943666 to 63943687 21 + TSS region transcription start site region 126144
Sox7 14 63943706 to 63950732 7026 + protein coding gene SRY (sex determining region Y)-box 7
Tssr126145 14 63943932 to 63943952 20 + TSS region transcription start site region 126145
Cpgi6619 14 63947910 to 63948160 250 CpG island CpG island 6619
4930578I06Rik 14 63971121 to 63987780 16659 - protein coding gene RIKEN cDNA 4930578I06 gene
Gm36410 14 63981937 to 63985935 3998 + lncRNA gene predicted gene, 36410
D14Mit31 14 63984558 to 63984671 113 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 31
Gm10867 14 63987612 to 63992036 4424 unclassified gene predicted gene 10867
Tssr129204 14 63987739 to 63987767 28 - TSS region transcription start site region 129204
Tssr129205 14 63987774 to 63987793 19 - TSS region transcription start site region 129205
Tssr126146 14 63992425 to 63992443 18 + TSS region transcription start site region 126146
Rp1l1 14 63992431 to 64033506 41075 + protein coding gene retinitis pigmentosa 1 homolog like 1
Tssr126147 14 63992444 to 63992455 11 + TSS region transcription start site region 126147
Tssr126148 14 63992467 to 63992479 12 + TSS region transcription start site region 126148
D14Mit235 14 64052218 to 64052338 120 DNA segment DNA Segment, Chr 14, Massachusetts Institute of Technology 235
Tssr126149 14 64072031 to 64072038 7 + TSS region transcription start site region 126149
Prss55 14 64075435 to 64085433 9998 - protein coding gene protease, serine 55
Tssr129206 14 64085400 to 64085415 15 - TSS region transcription start site region 129206
Tssr126150 14 64085507 to 64085521 14 + TSS region transcription start site region 126150
Prss51 14 64086234 to 64097678 11444 + protein coding gene protease, serine 51
Tssr126151 14 64093682 to 64093712 30 + TSS region transcription start site region 126151
Tssr126152 14 64093713 to 64093737 24 + TSS region transcription start site region 126152
4930471C04Rik 14 64099295 to 64104235 4940 - lincRNA gene RIKEN cDNA 4930471C04 gene
Tssr129207 14 64104229 to 64104238 9 - TSS region transcription start site region 129207
Tssr126153 14 64104316 to 64104328 12 + TSS region transcription start site region 126153
Prss52 14 64104323 to 64113751 9428 + protein coding gene protease, serine 52
Tssr4451 14 64104338 to 64104340 2 + TSS region transcription start site region 4451
Gm17116 14 64111200 to 64114641 3441 - antisense lncRNA gene predicted gene 17116
9630015K15Rik 14 64116314 to 64127605 11291 + antisense lncRNA gene RIKEN cDNA 9630015K15 gene
Msra 14 64122625 to 64455903 333278 - protein coding gene methionine sulfoxide reductase A
5230401M06Rik 14 64138546 to 64139825 1279 unclassified gene RIKEN cDNA 5230401M06 gene
Tssr129208 14 64146883 to 64146885 2 - TSS region transcription start site region 129208
Tssr129209 14 64174610 to 64174633 23 - TSS region transcription start site region 129209
Tssr129210 14 64174676 to 64174690 14 - TSS region transcription start site region 129210
Tssr4452 14 64176436 to 64176440 4 + TSS region transcription start site region 4452
1700044K19Rik 14 64185461 to 64185974 513 unclassified gene RIKEN cDNA 1700044K19 gene
Gm41176 14 64272290 to 64280235 7945 + lncRNA gene predicted gene, 41176
Tssr126154 14 64323980 to 64323985 5 + TSS region transcription start site region 126154
Tssr129211 14 64327577 to 64327597 20 - TSS region transcription start site region 129211
Tssr129212 14 64403662 to 64403665 3 - TSS region transcription start site region 129212
Tssr129213 14 64413498 to 64413501 3 - TSS region transcription start site region 129213
Tssr129214 14 64417041 to 64417047 6 - TSS region transcription start site region 129214
Tssr129215 14 64417135 to 64417162 27 - TSS region transcription start site region 129215
Tssr129216 14 64417781 to 64417790 9 - TSS region transcription start site region 129216
Tssr129217 14 64417801 to 64417833 32 - TSS region transcription start site region 129217
Tssr129218 14 64419522 to 64419536 14 - TSS region transcription start site region 129218
Tssr129219 14 64434182 to 64434226 44 - TSS region transcription start site region 129219
Tssr126155 14 64434371 to 64434391 20 + TSS region transcription start site region 126155
Tssr129220 14 64439807 to 64439811 4 - TSS region transcription start site region 129220
Tssr126156 14 64440157 to 64440179 22 + TSS region transcription start site region 126156
Cpgi6620 14 64440313 to 64441135 822 CpG island CpG island 6620
Tssr4453 14 64440467 to 64440485 18 - TSS region transcription start site region 4453
Tssr129221 14 64440487 to 64440509 22 - TSS region transcription start site region 129221
Tssr126157 14 64440666 to 64440720 54 + TSS region transcription start site region 126157
Tssr126158 14 64440726 to 64440747 21 + TSS region transcription start site region 126158
Tssr129222 14 64440797 to 64440802 5 - TSS region transcription start site region 129222
Tssr129223 14 64440813 to 64440820 7 - TSS region transcription start site region 129223
Tssr4454 14 64440843 to 64440846 3 - TSS region transcription start site region 4454
Tssr129224 14 64440848 to 64440863 15 - TSS region transcription start site region 129224
Tssr129225 14 64440868 to 64440923 55 - TSS region transcription start site region 129225
Tssr129226 14 64440934 to 64440955 21 - TSS region transcription start site region 129226
Tssr129227 14 64440964 to 64440981 17 - TSS region transcription start site region 129227
Tssr4455 14 64441020 to 64441029 9 - TSS region transcription start site region 4455
Tssr129228 14 64441034 to 64441045 11 - TSS region transcription start site region 129228
Tssr126159 14 64441094 to 64441096 2 + TSS region transcription start site region 126159
Tssr129229 14 64441856 to 64441861 5 - TSS region transcription start site region 129229
Gm47202 14 64530952 to 64537538 6586 - lincRNA gene predicted gene, 47202
Tssr126160 14 64574364 to 64574426 62 + TSS region transcription start site region 126160
Tssr129230 14 64576114 to 64576138 24 - TSS region transcription start site region 129230
Tssr126161 14 64580759 to 64580770 11 + TSS region transcription start site region 126161
Tssr126162 14 64583715 to 64583742 27 + TSS region transcription start site region 126162
Cpgi6621 14 64586821 to 64587957 1136 CpG island CpG island 6621
Tssr126163 14 64587173 to 64587191 18 + TSS region transcription start site region 126163
Tssr126164 14 64587289 to 64587305 16 + TSS region transcription start site region 126164
Tssr126165 14 64587323 to 64587336 13 + TSS region transcription start site region 126165
Tssr126166 14 64587360 to 64587372 12 + TSS region transcription start site region 126166
Tssr126167 14 64587384 to 64587434 50 + TSS region transcription start site region 126167
Tssr126168 14 64587478 to 64587489 11 + TSS region transcription start site region 126168
Tssr126169 14 64588014 to 64588058 44 + TSS region transcription start site region 126169
Tssr126170 14 64588098 to 64588108 10 + TSS region transcription start site region 126170
Tssr126171 14 64588112 to 64588120 8 + TSS region transcription start site region 126171
Mir124a-1hg 14 64588115 to 64593961 5846 + lincRNA gene Mir124-1 host gene (non-protein coding)
Tssr126172 14 64588122 to 64588136 14 + TSS region transcription start site region 126172
Tssr126173 14 64588278 to 64588289 11 + TSS region transcription start site region 126173
Tssr126174 14 64588336 to 64588361 25 + TSS region transcription start site region 126174
Tssr126175 14 64588545 to 64588559 14 + TSS region transcription start site region 126175
Tssr126176 14 64589689 to 64589753 64 + TSS region transcription start site region 126176
Tssr126177 14 64589802 to 64589848 46 + TSS region transcription start site region 126177
Cpgi6622 14 64589821 to 64590932 1111 CpG island CpG island 6622
Tssr126178 14 64589861 to 64589898 37 + TSS region transcription start site region 126178
Tssr126179 14 64589900 to 64589910 10 + TSS region transcription start site region 126179
Tssr126180 14 64590294 to 64590307 13 + TSS region transcription start site region 126180
Tssr126181 14 64590378 to 64590389 11 + TSS region transcription start site region 126181
Tssr126182 14 64590404 to 64590426 22 + TSS region transcription start site region 126182
Tssr126183 14 64590438 to 64590452 14 + TSS region transcription start site region 126183
Tssr126184 14 64590461 to 64590473 12 + TSS region transcription start site region 126184
Tssr126185 14 64590481 to 64590488 7 + TSS region transcription start site region 126185
Mir124a-1 14 64590657 to 64590741 84 + miRNA gene microRNA 124a-1
Tssr126186 14 64590729 to 64590732 3 + TSS region transcription start site region 126186
Mir3078 14 64591185 to 64591271 86 + miRNA gene microRNA 3078
Gm36924 14 64624577 to 64638185 13608 + lncRNA gene predicted gene, 36924
Cpgi6623 14 64652271 to 64652958 687 CpG island CpG island 6623
Tssr126187 14 64652485 to 64652494 9 + TSS region transcription start site region 126187