Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:63229220-63445635

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54 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gata4 14 63198922 to 63271692 72770 - protein coding gene GATA binding protein 4
Cpgi6602 14 63240054 to 63241704 1650 CpG island CpG island 6602
Cpgi6603 14 63245025 to 63246157 1132 CpG island CpG island 6603
Tssr129168 14 63245219 to 63245265 46 - TSS region transcription start site region 129168
Tssr129169 14 63245273 to 63245278 5 - TSS region transcription start site region 129169
Tssr129170 14 63245500 to 63245544 44 - TSS region transcription start site region 129170
Cpgi6604 14 63246386 to 63246714 328 CpG island CpG island 6604
Tssr126121 14 63248043 to 63248063 20 + TSS region transcription start site region 126121
Cpgi6605 14 63251494 to 63251980 486 CpG island CpG island 6605
Cpgi6606 14 63255517 to 63256501 984 CpG island CpG island 6606
Tssr129171 14 63256597 to 63256632 35 - TSS region transcription start site region 129171
Cpgi6607 14 63268040 to 63268917 877 CpG island CpG island 6607
Tssr126122 14 63269168 to 63269180 12 + TSS region transcription start site region 126122
Tssr129172 14 63271622 to 63271647 25 - TSS region transcription start site region 129172
Tssr129173 14 63271654 to 63271679 25 - TSS region transcription start site region 129173
Tssr129174 14 63271682 to 63271702 20 - TSS region transcription start site region 129174
Tssr129175 14 63271708 to 63271723 15 - TSS region transcription start site region 129175
Tssr129176 14 63271823 to 63271850 27 - TSS region transcription start site region 129176
Tssr129177 14 63271854 to 63271881 27 - TSS region transcription start site region 129177
Gm4151 14 63308919 to 63358503 49584 + unclassified gene predicted gene 4151
Tssr126123 14 63317713 to 63317731 18 + TSS region transcription start site region 126123
Tssr126124 14 63317732 to 63317748 16 + TSS region transcription start site region 126124
Gm49390 14 63317745 to 63336957 19212 + lincRNA gene predicted gene, 49390
Tssr129178 14 63321532 to 63321543 11 - TSS region transcription start site region 129178
Tssr129179 14 63321544 to 63321551 7 - TSS region transcription start site region 129179
Tssr129180 14 63321564 to 63321569 5 - TSS region transcription start site region 129180
Gm5463 14 63329220 to 63345635 16415 + lincRNA gene predicted gene 5463
Cpgi6608 14 63338515 to 63338699 184 CpG island CpG island 6608
Tssr126125 14 63339966 to 63339972 6 + TSS region transcription start site region 126125
Tssr129181 14 63349524 to 63349526 2 - TSS region transcription start site region 129181
Gm36165 14 63358672 to 63373196 14524 + lncRNA gene predicted gene, 36165
Gm46458 14 63360335 to 63371584 11249 - lncRNA gene predicted gene, 46458
Tssr126126 14 63370609 to 63370622 13 + TSS region transcription start site region 126126
Tssr129182 14 63371142 to 63371153 11 - TSS region transcription start site region 129182
Blk 14 63372836 to 63417037 44201 - protein coding gene B lymphoid kinase
Tssr129183 14 63377871 to 63377898 27 - TSS region transcription start site region 129183
Tssr129184 14 63405228 to 63405241 13 - TSS region transcription start site region 129184
Tssr129185 14 63405251 to 63405262 11 - TSS region transcription start site region 129185
Tssr129186 14 63416817 to 63416845 28 - TSS region transcription start site region 129186
Tssr126127 14 63416975 to 63416982 7 + TSS region transcription start site region 126127
Tssr129187 14 63417029 to 63417059 30 - TSS region transcription start site region 129187
Tssr129188 14 63417073 to 63417084 11 - TSS region transcription start site region 129188
Tssr129189 14 63417125 to 63417138 13 - TSS region transcription start site region 129189
Tssr129190 14 63418447 to 63418474 27 - TSS region transcription start site region 129190
Tssr129191 14 63418820 to 63418835 15 - TSS region transcription start site region 129191
Tssr129192 14 63419539 to 63419567 28 - TSS region transcription start site region 129192
Gm21430 14 63428733 to 63429730 997 - pseudogene predicted gene, 21430
Cpgi6609 14 63435672 to 63436795 1123 CpG island CpG island 6609
Fam167a 14 63436394 to 63465498 29104 + protein coding gene family with sequence similarity 167, member A
Tssr129193 14 63436431 to 63436440 9 - TSS region transcription start site region 129193
Tssr126128 14 63436490 to 63436525 35 + TSS region transcription start site region 126128
Tssr126129 14 63436531 to 63436548 17 + TSS region transcription start site region 126129
Tssr129194 14 63438068 to 63438082 14 - TSS region transcription start site region 129194
D14Mit1003 14 63442735 to 63442878 143 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 1003