Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:63143685-63943747

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121 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ctsb 14 63122462 to 63145923 23461 + protein coding gene cathepsin B
Tssr129157 14 63144739 to 63144752 13 - TSS region transcription start site region 129157
Fdft1 14 63145150 to 63179578 34428 - protein coding gene farnesyl diphosphate farnesyl transferase 1
Cpgi6599 14 63164517 to 63165014 497 CpG island CpG island 6599
Tssr129158 14 63164668 to 63164685 17 - TSS region transcription start site region 129158
Tssr129159 14 63164925 to 63164941 16 - TSS region transcription start site region 129159
Tssr129160 14 63164947 to 63164962 15 - TSS region transcription start site region 129160
Tssr129161 14 63164967 to 63164980 13 - TSS region transcription start site region 129161
Tssr129162 14 63171360 to 63171361 1 - TSS region transcription start site region 129162
Cpgi6600 14 63177554 to 63178529 975 CpG island CpG island 6600
Tssr4449 14 63177786 to 63177795 9 - TSS region transcription start site region 4449
Tssr129163 14 63177804 to 63177889 85 - TSS region transcription start site region 129163
Tssr129164 14 63177906 to 63177961 55 - TSS region transcription start site region 129164
Neil2 14 63182443 to 63193856 11413 - protein coding gene nei like 2 (E. coli)
Tssr129165 14 63191933 to 63191937 4 - TSS region transcription start site region 129165
Cpgi6601 14 63193439 to 63193956 517 CpG island CpG island 6601
Tssr129166 14 63193488 to 63193508 20 - TSS region transcription start site region 129166
Gata4 14 63198922 to 63271692 72770 - protein coding gene GATA binding protein 4
Tssr129167 14 63199258 to 63199284 26 - TSS region transcription start site region 129167
Cpgi6602 14 63240054 to 63241704 1650 CpG island CpG island 6602
Cpgi6603 14 63245025 to 63246157 1132 CpG island CpG island 6603
Tssr129168 14 63245219 to 63245265 46 - TSS region transcription start site region 129168
Tssr129169 14 63245273 to 63245278 5 - TSS region transcription start site region 129169
Tssr129170 14 63245500 to 63245544 44 - TSS region transcription start site region 129170
Cpgi6604 14 63246386 to 63246714 328 CpG island CpG island 6604
Tssr126121 14 63248043 to 63248063 20 + TSS region transcription start site region 126121
Cpgi6605 14 63251494 to 63251980 486 CpG island CpG island 6605
Cpgi6606 14 63255517 to 63256501 984 CpG island CpG island 6606
Tssr129171 14 63256597 to 63256632 35 - TSS region transcription start site region 129171
Cpgi6607 14 63268040 to 63268917 877 CpG island CpG island 6607
Tssr126122 14 63269168 to 63269180 12 + TSS region transcription start site region 126122
Tssr129172 14 63271622 to 63271647 25 - TSS region transcription start site region 129172
Tssr129173 14 63271654 to 63271679 25 - TSS region transcription start site region 129173
Tssr129174 14 63271682 to 63271702 20 - TSS region transcription start site region 129174
Tssr129175 14 63271708 to 63271723 15 - TSS region transcription start site region 129175
Tssr129176 14 63271823 to 63271850 27 - TSS region transcription start site region 129176
Tssr129177 14 63271854 to 63271881 27 - TSS region transcription start site region 129177
Gm4151 14 63308919 to 63358503 49584 + unclassified gene predicted gene 4151
Tssr126123 14 63317713 to 63317731 18 + TSS region transcription start site region 126123
Tssr126124 14 63317732 to 63317748 16 + TSS region transcription start site region 126124
Gm49390 14 63317745 to 63336957 19212 + lincRNA gene predicted gene, 49390
Tssr129178 14 63321532 to 63321543 11 - TSS region transcription start site region 129178
Tssr129179 14 63321544 to 63321551 7 - TSS region transcription start site region 129179
Tssr129180 14 63321564 to 63321569 5 - TSS region transcription start site region 129180
Gm5463 14 63329220 to 63345635 16415 + lincRNA gene predicted gene 5463
Cpgi6608 14 63338515 to 63338699 184 CpG island CpG island 6608
Tssr126125 14 63339966 to 63339972 6 + TSS region transcription start site region 126125
Tssr129181 14 63349524 to 63349526 2 - TSS region transcription start site region 129181
Gm36165 14 63358672 to 63373196 14524 + lncRNA gene predicted gene, 36165
Gm46458 14 63360335 to 63371584 11249 - lncRNA gene predicted gene, 46458
Tssr126126 14 63370609 to 63370622 13 + TSS region transcription start site region 126126
Tssr129182 14 63371142 to 63371153 11 - TSS region transcription start site region 129182
Blk 14 63372836 to 63417037 44201 - protein coding gene B lymphoid kinase
Tssr129183 14 63377871 to 63377898 27 - TSS region transcription start site region 129183
Tssr129184 14 63405228 to 63405241 13 - TSS region transcription start site region 129184
Tssr129185 14 63405251 to 63405262 11 - TSS region transcription start site region 129185
Tssr129186 14 63416817 to 63416845 28 - TSS region transcription start site region 129186
Tssr126127 14 63416975 to 63416982 7 + TSS region transcription start site region 126127
Tssr129187 14 63417029 to 63417059 30 - TSS region transcription start site region 129187
Tssr129188 14 63417073 to 63417084 11 - TSS region transcription start site region 129188
Tssr129189 14 63417125 to 63417138 13 - TSS region transcription start site region 129189
Tssr129190 14 63418447 to 63418474 27 - TSS region transcription start site region 129190
Tssr129191 14 63418820 to 63418835 15 - TSS region transcription start site region 129191
Tssr129192 14 63419539 to 63419567 28 - TSS region transcription start site region 129192
Gm21430 14 63428733 to 63429730 997 - pseudogene predicted gene, 21430
Cpgi6609 14 63435672 to 63436795 1123 CpG island CpG island 6609
Fam167a 14 63436394 to 63465498 29104 + protein coding gene family with sequence similarity 167, member A
Tssr129193 14 63436431 to 63436440 9 - TSS region transcription start site region 129193
Tssr126128 14 63436490 to 63436525 35 + TSS region transcription start site region 126128
Tssr126129 14 63436531 to 63436548 17 + TSS region transcription start site region 126129
Tssr129194 14 63438068 to 63438082 14 - TSS region transcription start site region 129194
D14Mit1003 14 63442735 to 63442878 143 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 1003
Tssr126130 14 63451457 to 63451469 12 + TSS region transcription start site region 126130
Tssr126131 14 63451472 to 63451501 29 + TSS region transcription start site region 126131
Gm47074 14 63475117 to 63475376 259 - pseudogene predicted gene, 47074
Tdh 14 63492347 to 63509092 16745 - protein coding gene L-threonine dehydrogenase
Cpgi6610 14 63493589 to 63494032 443 CpG island CpG island 6610
Tssr126132 14 63493673 to 63493681 8 + TSS region transcription start site region 126132
Tssr126133 14 63493688 to 63493702 14 + TSS region transcription start site region 126133
Gm17232 14 63493993 to 63499868 5875 + antisense lncRNA gene predicted gene 17232
Tssr129195 14 63500163 to 63500190 27 - TSS region transcription start site region 129195
Cpgi6611 14 63508491 to 63509006 515 CpG island CpG island 6611
Tssr129196 14 63508766 to 63508773 7 - TSS region transcription start site region 129196
Mtmr9 14 63521743 to 63544050 22307 - protein coding gene myotubularin related protein 9
Cpgi6612 14 63543345 to 63544377 1032 CpG island CpG island 6612
Tssr129197 14 63543658 to 63543683 25 - TSS region transcription start site region 129197
Tssr129198 14 63543685 to 63543747 62 - TSS region transcription start site region 129198
Tssr129199 14 63543882 to 63543890 8 - TSS region transcription start site region 129199
Tssr129200 14 63543914 to 63543925 11 - TSS region transcription start site region 129200
Tssr129201 14 63543931 to 63543991 60 - TSS region transcription start site region 129201
Tssr129202 14 63543999 to 63544014 15 - TSS region transcription start site region 129202
Gm15918 14 63602524 to 63607372 4848 - antisense lncRNA gene predicted gene 15918
Cpgi6613 14 63605966 to 63607755 1789 CpG island CpG island 6613
Tssr126134 14 63606043 to 63606077 34 + TSS region transcription start site region 126134
Tssr126135 14 63606387 to 63606408 21 + TSS region transcription start site region 126135
Tssr126136 14 63606491 to 63606527 36 + TSS region transcription start site region 126136
Xkr6 14 63606530 to 63820411 213881 + protein coding gene X-linked Kx blood group related 6
Tssr126137 14 63607014 to 63607029 15 + TSS region transcription start site region 126137
Gm38524 14 63622640 to 63666182 43542 + lncRNA gene predicted gene, 38524
D14Mit88 14 63657170 to 63657315 145 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 88
Mir598 14 63727189 to 63727267 78 + miRNA gene microRNA 598
Gm36218 14 63738569 to 63742436 3867 - lncRNA gene predicted gene, 36218
Cpgi6614 14 63743407 to 63743834 427 CpG island CpG island 6614
Tssr126138 14 63748318 to 63748323 5 + TSS region transcription start site region 126138
Cpgi6615 14 63783597 to 63783833 236 CpG island CpG island 6615
Tssr126139 14 63783658 to 63783667 9 + TSS region transcription start site region 126139
Gm41175 14 63803720 to 63826134 22414 - lncRNA gene predicted gene, 41175
Tssr126140 14 63814645 to 63814646 1 + TSS region transcription start site region 126140
Cpgi6616 14 63818984 to 63819753 769 CpG island CpG island 6616
Tssr126141 14 63819741 to 63819754 13 + TSS region transcription start site region 126141
Tssr4450 14 63835092 to 63835102 10 + TSS region transcription start site region 4450
Gm20081 14 63854209 to 63855605 1396 unclassified non-coding RNA gene predicted gene, 20081
4921532D01Rik 14 63858734 to 63860137 1403 - lncRNA gene RIKEN cDNA 4921532D01 gene
Cpgi6617 14 63859852 to 63860837 985 CpG island CpG island 6617
Tssr129203 14 63860268 to 63860293 25 - TSS region transcription start site region 129203
Tssr126142 14 63860290 to 63860361 71 + TSS region transcription start site region 126142
Pinx1 14 63860364 to 63919859 59495 + protein coding gene PIN2/TERF1 interacting, telomerase inhibitor 1
Tssr126143 14 63899742 to 63899791 49 + TSS region transcription start site region 126143
Cpgi6618 14 63942678 to 63944329 1651 CpG island CpG island 6618
Tssr126144 14 63943666 to 63943687 21 + TSS region transcription start site region 126144
Sox7 14 63943706 to 63950732 7026 + protein coding gene SRY (sex determining region Y)-box 7