Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:63140964-65740981

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360 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ctsb 14 63122462 to 63145923 23461 + protein coding gene cathepsin B
Tssr126100 14 63141729 to 63141742 13 + TSS region transcription start site region 126100
Tssr129140 14 63141757 to 63141780 23 - TSS region transcription start site region 129140
Tssr126101 14 63141760 to 63141781 21 + TSS region transcription start site region 126101
Tssr126102 14 63141789 to 63141835 46 + TSS region transcription start site region 126102
Tssr129141 14 63141796 to 63141821 25 - TSS region transcription start site region 129141
Tssr129142 14 63141862 to 63141870 8 - TSS region transcription start site region 129142
Tssr126103 14 63142283 to 63142297 14 + TSS region transcription start site region 126103
Tssr126104 14 63142311 to 63142340 29 + TSS region transcription start site region 126104
Tssr126105 14 63142357 to 63142375 18 + TSS region transcription start site region 126105
Tssr129143 14 63142366 to 63142373 7 - TSS region transcription start site region 129143
Tssr129144 14 63142394 to 63142410 16 - TSS region transcription start site region 129144
Tssr126106 14 63142402 to 63142440 38 + TSS region transcription start site region 126106
Tssr129145 14 63142412 to 63142427 15 - TSS region transcription start site region 129145
Tssr129146 14 63142461 to 63142465 4 - TSS region transcription start site region 129146
Tssr129147 14 63142497 to 63142524 27 - TSS region transcription start site region 129147
Tssr129148 14 63142530 to 63142547 17 - TSS region transcription start site region 129148
Tssr126107 14 63142583 to 63142649 66 + TSS region transcription start site region 126107
Tssr129149 14 63142623 to 63142651 28 - TSS region transcription start site region 129149
Tssr129150 14 63142655 to 63142679 24 - TSS region transcription start site region 129150
Tssr126108 14 63142661 to 63142702 41 + TSS region transcription start site region 126108
Tssr129151 14 63142684 to 63142711 27 - TSS region transcription start site region 129151
Tssr126109 14 63142706 to 63142750 44 + TSS region transcription start site region 126109
Tssr129152 14 63142716 to 63142726 10 - TSS region transcription start site region 129152
Tssr126110 14 63142759 to 63142785 26 + TSS region transcription start site region 126110
Tssr126111 14 63142797 to 63142813 16 + TSS region transcription start site region 126111
Tssr126112 14 63142814 to 63142834 20 + TSS region transcription start site region 126112
Tssr126113 14 63142852 to 63142877 25 + TSS region transcription start site region 126113
Tssr126114 14 63142889 to 63142900 11 + TSS region transcription start site region 126114
Tssr126115 14 63142903 to 63142915 12 + TSS region transcription start site region 126115
Tssr129153 14 63142931 to 63142936 5 - TSS region transcription start site region 129153
Tssr126116 14 63142937 to 63142962 25 + TSS region transcription start site region 126116
Tssr129154 14 63142960 to 63142971 11 - TSS region transcription start site region 129154
Tssr126117 14 63142999 to 63143007 8 + TSS region transcription start site region 126117
Tssr129155 14 63143035 to 63143046 11 - TSS region transcription start site region 129155
Tssr126118 14 63143062 to 63143068 6 + TSS region transcription start site region 126118
Tssr129156 14 63143127 to 63143138 11 - TSS region transcription start site region 129156
Tssr126119 14 63143174 to 63143189 15 + TSS region transcription start site region 126119
Tssr126120 14 63143644 to 63143660 16 + TSS region transcription start site region 126120
Tssr129157 14 63144739 to 63144752 13 - TSS region transcription start site region 129157
Fdft1 14 63145150 to 63179578 34428 - protein coding gene farnesyl diphosphate farnesyl transferase 1
Cpgi6599 14 63164517 to 63165014 497 CpG island CpG island 6599
Tssr129158 14 63164668 to 63164685 17 - TSS region transcription start site region 129158
Tssr129159 14 63164925 to 63164941 16 - TSS region transcription start site region 129159
Tssr129160 14 63164947 to 63164962 15 - TSS region transcription start site region 129160
Tssr129161 14 63164967 to 63164980 13 - TSS region transcription start site region 129161
Tssr129162 14 63171360 to 63171361 1 - TSS region transcription start site region 129162
Cpgi6600 14 63177554 to 63178529 975 CpG island CpG island 6600
Tssr4449 14 63177786 to 63177795 9 - TSS region transcription start site region 4449
Tssr129163 14 63177804 to 63177889 85 - TSS region transcription start site region 129163
Tssr129164 14 63177906 to 63177961 55 - TSS region transcription start site region 129164
Neil2 14 63182443 to 63193856 11413 - protein coding gene nei like 2 (E. coli)
Tssr129165 14 63191933 to 63191937 4 - TSS region transcription start site region 129165
Cpgi6601 14 63193439 to 63193956 517 CpG island CpG island 6601
Tssr129166 14 63193488 to 63193508 20 - TSS region transcription start site region 129166
Gata4 14 63198922 to 63271692 72770 - protein coding gene GATA binding protein 4
Tssr129167 14 63199258 to 63199284 26 - TSS region transcription start site region 129167
Cpgi6602 14 63240054 to 63241704 1650 CpG island CpG island 6602
Cpgi6603 14 63245025 to 63246157 1132 CpG island CpG island 6603
Tssr129168 14 63245219 to 63245265 46 - TSS region transcription start site region 129168
Tssr129169 14 63245273 to 63245278 5 - TSS region transcription start site region 129169
Tssr129170 14 63245500 to 63245544 44 - TSS region transcription start site region 129170
Cpgi6604 14 63246386 to 63246714 328 CpG island CpG island 6604
Tssr126121 14 63248043 to 63248063 20 + TSS region transcription start site region 126121
Cpgi6605 14 63251494 to 63251980 486 CpG island CpG island 6605
Cpgi6606 14 63255517 to 63256501 984 CpG island CpG island 6606
Tssr129171 14 63256597 to 63256632 35 - TSS region transcription start site region 129171
Cpgi6607 14 63268040 to 63268917 877 CpG island CpG island 6607
Tssr126122 14 63269168 to 63269180 12 + TSS region transcription start site region 126122
Tssr129172 14 63271622 to 63271647 25 - TSS region transcription start site region 129172
Tssr129173 14 63271654 to 63271679 25 - TSS region transcription start site region 129173
Tssr129174 14 63271682 to 63271702 20 - TSS region transcription start site region 129174
Tssr129175 14 63271708 to 63271723 15 - TSS region transcription start site region 129175
Tssr129176 14 63271823 to 63271850 27 - TSS region transcription start site region 129176
Tssr129177 14 63271854 to 63271881 27 - TSS region transcription start site region 129177
Gm4151 14 63308919 to 63358503 49584 + unclassified gene predicted gene 4151
Tssr126123 14 63317713 to 63317731 18 + TSS region transcription start site region 126123
Tssr126124 14 63317732 to 63317748 16 + TSS region transcription start site region 126124
Gm49390 14 63317745 to 63336957 19212 + lincRNA gene predicted gene, 49390
Tssr129178 14 63321532 to 63321543 11 - TSS region transcription start site region 129178
Tssr129179 14 63321544 to 63321551 7 - TSS region transcription start site region 129179
Tssr129180 14 63321564 to 63321569 5 - TSS region transcription start site region 129180
Gm5463 14 63329220 to 63345635 16415 + lincRNA gene predicted gene 5463
Cpgi6608 14 63338515 to 63338699 184 CpG island CpG island 6608
Tssr126125 14 63339966 to 63339972 6 + TSS region transcription start site region 126125
Tssr129181 14 63349524 to 63349526 2 - TSS region transcription start site region 129181
Gm36165 14 63358672 to 63373196 14524 + lncRNA gene predicted gene, 36165
Gm46458 14 63360335 to 63371584 11249 - lncRNA gene predicted gene, 46458
Tssr126126 14 63370609 to 63370622 13 + TSS region transcription start site region 126126
Tssr129182 14 63371142 to 63371153 11 - TSS region transcription start site region 129182
Blk 14 63372836 to 63417037 44201 - protein coding gene B lymphoid kinase
Tssr129183 14 63377871 to 63377898 27 - TSS region transcription start site region 129183
Tssr129184 14 63405228 to 63405241 13 - TSS region transcription start site region 129184
Tssr129185 14 63405251 to 63405262 11 - TSS region transcription start site region 129185
Tssr129186 14 63416817 to 63416845 28 - TSS region transcription start site region 129186
Tssr126127 14 63416975 to 63416982 7 + TSS region transcription start site region 126127
Tssr129187 14 63417029 to 63417059 30 - TSS region transcription start site region 129187
Tssr129188 14 63417073 to 63417084 11 - TSS region transcription start site region 129188
Tssr129189 14 63417125 to 63417138 13 - TSS region transcription start site region 129189
Tssr129190 14 63418447 to 63418474 27 - TSS region transcription start site region 129190
Tssr129191 14 63418820 to 63418835 15 - TSS region transcription start site region 129191
Tssr129192 14 63419539 to 63419567 28 - TSS region transcription start site region 129192
Gm21430 14 63428733 to 63429730 997 - pseudogene predicted gene, 21430
Cpgi6609 14 63435672 to 63436795 1123 CpG island CpG island 6609
Fam167a 14 63436394 to 63465498 29104 + protein coding gene family with sequence similarity 167, member A
Tssr129193 14 63436431 to 63436440 9 - TSS region transcription start site region 129193
Tssr126128 14 63436490 to 63436525 35 + TSS region transcription start site region 126128
Tssr126129 14 63436531 to 63436548 17 + TSS region transcription start site region 126129
Tssr129194 14 63438068 to 63438082 14 - TSS region transcription start site region 129194
D14Mit1003 14 63442735 to 63442878 143 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 1003
Tssr126130 14 63451457 to 63451469 12 + TSS region transcription start site region 126130
Tssr126131 14 63451472 to 63451501 29 + TSS region transcription start site region 126131
Gm47074 14 63475117 to 63475376 259 - pseudogene predicted gene, 47074
Tdh 14 63492347 to 63509092 16745 - protein coding gene L-threonine dehydrogenase
Cpgi6610 14 63493589 to 63494032 443 CpG island CpG island 6610
Tssr126132 14 63493673 to 63493681 8 + TSS region transcription start site region 126132
Tssr126133 14 63493688 to 63493702 14 + TSS region transcription start site region 126133
Gm17232 14 63493993 to 63499868 5875 + antisense lncRNA gene predicted gene 17232
Tssr129195 14 63500163 to 63500190 27 - TSS region transcription start site region 129195
Cpgi6611 14 63508491 to 63509006 515 CpG island CpG island 6611
Tssr129196 14 63508766 to 63508773 7 - TSS region transcription start site region 129196
Mtmr9 14 63521743 to 63544050 22307 - protein coding gene myotubularin related protein 9
Cpgi6612 14 63543345 to 63544377 1032 CpG island CpG island 6612
Tssr129197 14 63543658 to 63543683 25 - TSS region transcription start site region 129197
Tssr129198 14 63543685 to 63543747 62 - TSS region transcription start site region 129198
Tssr129199 14 63543882 to 63543890 8 - TSS region transcription start site region 129199
Tssr129200 14 63543914 to 63543925 11 - TSS region transcription start site region 129200
Tssr129201 14 63543931 to 63543991 60 - TSS region transcription start site region 129201
Tssr129202 14 63543999 to 63544014 15 - TSS region transcription start site region 129202
Gm15918 14 63602524 to 63607372 4848 - antisense lncRNA gene predicted gene 15918
Cpgi6613 14 63605966 to 63607755 1789 CpG island CpG island 6613
Tssr126134 14 63606043 to 63606077 34 + TSS region transcription start site region 126134
Tssr126135 14 63606387 to 63606408 21 + TSS region transcription start site region 126135
Tssr126136 14 63606491 to 63606527 36 + TSS region transcription start site region 126136
Xkr6 14 63606530 to 63820411 213881 + protein coding gene X-linked Kx blood group related 6
Tssr126137 14 63607014 to 63607029 15 + TSS region transcription start site region 126137
Gm38524 14 63622640 to 63666182 43542 + lncRNA gene predicted gene, 38524
D14Mit88 14 63657170 to 63657315 145 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 88
Mir598 14 63727189 to 63727267 78 + miRNA gene microRNA 598
Gm36218 14 63738569 to 63742436 3867 - lncRNA gene predicted gene, 36218
Cpgi6614 14 63743407 to 63743834 427 CpG island CpG island 6614
Tssr126138 14 63748318 to 63748323 5 + TSS region transcription start site region 126138
Cpgi6615 14 63783597 to 63783833 236 CpG island CpG island 6615
Tssr126139 14 63783658 to 63783667 9 + TSS region transcription start site region 126139
Gm41175 14 63803720 to 63826134 22414 - lncRNA gene predicted gene, 41175
Tssr126140 14 63814645 to 63814646 1 + TSS region transcription start site region 126140
Cpgi6616 14 63818984 to 63819753 769 CpG island CpG island 6616
Tssr126141 14 63819741 to 63819754 13 + TSS region transcription start site region 126141
Tssr4450 14 63835092 to 63835102 10 + TSS region transcription start site region 4450
Gm20081 14 63854209 to 63855605 1396 unclassified non-coding RNA gene predicted gene, 20081
4921532D01Rik 14 63858734 to 63860137 1403 - lncRNA gene RIKEN cDNA 4921532D01 gene
Cpgi6617 14 63859852 to 63860837 985 CpG island CpG island 6617
Tssr129203 14 63860268 to 63860293 25 - TSS region transcription start site region 129203
Tssr126142 14 63860290 to 63860361 71 + TSS region transcription start site region 126142
Pinx1 14 63860364 to 63919859 59495 + protein coding gene PIN2/TERF1 interacting, telomerase inhibitor 1
Tssr126143 14 63899742 to 63899791 49 + TSS region transcription start site region 126143
Cpgi6618 14 63942678 to 63944329 1651 CpG island CpG island 6618
Tssr126144 14 63943666 to 63943687 21 + TSS region transcription start site region 126144
Sox7 14 63943706 to 63950732 7026 + protein coding gene SRY (sex determining region Y)-box 7
Tssr126145 14 63943932 to 63943952 20 + TSS region transcription start site region 126145
Cpgi6619 14 63947910 to 63948160 250 CpG island CpG island 6619
4930578I06Rik 14 63971121 to 63987780 16659 - protein coding gene RIKEN cDNA 4930578I06 gene
Gm36410 14 63981937 to 63985935 3998 + lncRNA gene predicted gene, 36410
D14Mit31 14 63984558 to 63984671 113 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 31
Gm10867 14 63987612 to 63992036 4424 unclassified gene predicted gene 10867
Tssr129204 14 63987739 to 63987767 28 - TSS region transcription start site region 129204
Tssr129205 14 63987774 to 63987793 19 - TSS region transcription start site region 129205
Tssr126146 14 63992425 to 63992443 18 + TSS region transcription start site region 126146
Rp1l1 14 63992431 to 64033506 41075 + protein coding gene retinitis pigmentosa 1 homolog like 1
Tssr126147 14 63992444 to 63992455 11 + TSS region transcription start site region 126147
Tssr126148 14 63992467 to 63992479 12 + TSS region transcription start site region 126148
D14Mit235 14 64052218 to 64052338 120 DNA segment DNA Segment, Chr 14, Massachusetts Institute of Technology 235
Tssr126149 14 64072031 to 64072038 7 + TSS region transcription start site region 126149
Prss55 14 64075435 to 64085433 9998 - protein coding gene protease, serine 55
Tssr129206 14 64085400 to 64085415 15 - TSS region transcription start site region 129206
Tssr126150 14 64085507 to 64085521 14 + TSS region transcription start site region 126150
Prss51 14 64086234 to 64097678 11444 + protein coding gene protease, serine 51
Tssr126151 14 64093682 to 64093712 30 + TSS region transcription start site region 126151
Tssr126152 14 64093713 to 64093737 24 + TSS region transcription start site region 126152
4930471C04Rik 14 64099295 to 64104235 4940 - lincRNA gene RIKEN cDNA 4930471C04 gene
Tssr129207 14 64104229 to 64104238 9 - TSS region transcription start site region 129207
Tssr126153 14 64104316 to 64104328 12 + TSS region transcription start site region 126153
Prss52 14 64104323 to 64113751 9428 + protein coding gene protease, serine 52
Tssr4451 14 64104338 to 64104340 2 + TSS region transcription start site region 4451
Gm17116 14 64111200 to 64114641 3441 - antisense lncRNA gene predicted gene 17116
9630015K15Rik 14 64116314 to 64127605 11291 + antisense lncRNA gene RIKEN cDNA 9630015K15 gene
Msra 14 64122625 to 64455903 333278 - protein coding gene methionine sulfoxide reductase A
5230401M06Rik 14 64138546 to 64139825 1279 unclassified gene RIKEN cDNA 5230401M06 gene
Tssr129208 14 64146883 to 64146885 2 - TSS region transcription start site region 129208
Tssr129209 14 64174610 to 64174633 23 - TSS region transcription start site region 129209
Tssr129210 14 64174676 to 64174690 14 - TSS region transcription start site region 129210
Tssr4452 14 64176436 to 64176440 4 + TSS region transcription start site region 4452
1700044K19Rik 14 64185461 to 64185974 513 unclassified gene RIKEN cDNA 1700044K19 gene
Gm41176 14 64272290 to 64280235 7945 + lncRNA gene predicted gene, 41176
Tssr126154 14 64323980 to 64323985 5 + TSS region transcription start site region 126154
Tssr129211 14 64327577 to 64327597 20 - TSS region transcription start site region 129211
Tssr129212 14 64403662 to 64403665 3 - TSS region transcription start site region 129212
Tssr129213 14 64413498 to 64413501 3 - TSS region transcription start site region 129213
Tssr129214 14 64417041 to 64417047 6 - TSS region transcription start site region 129214
Tssr129215 14 64417135 to 64417162 27 - TSS region transcription start site region 129215