Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:62998820-63838835

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235 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Defb47 14 62998077 to 63001160 3083 + protein coding gene defensin beta 47
Tssr126044 14 63003387 to 63003396 9 + TSS region transcription start site region 126044
Tssr129122 14 63008719 to 63008727 8 - TSS region transcription start site region 129122
Tssr126045 14 63011649 to 63011656 7 + TSS region transcription start site region 126045
Tssr126046 14 63011682 to 63011692 10 + TSS region transcription start site region 126046
Tssr126047 14 63011694 to 63011699 5 + TSS region transcription start site region 126047
Tssr126048 14 63011729 to 63011740 11 + TSS region transcription start site region 126048
Tssr126049 14 63011750 to 63011763 13 + TSS region transcription start site region 126049
Tssr126050 14 63011765 to 63011775 10 + TSS region transcription start site region 126050
Defb43 14 63011771 to 63018088 6317 + protein coding gene defensin beta 43
Gm19198 14 63025130 to 63025711 581 - pseudogene predicted gene, 19198
Cpgi6597 14 63025454 to 63025842 388 CpG island CpG island 6597
Defb30 14 63034087 to 63037846 3759 - protein coding gene defensin beta 30
Tssr129123 14 63034826 to 63034833 7 - TSS region transcription start site region 129123
Tssr129124 14 63037841 to 63037871 30 - TSS region transcription start site region 129124
Tssr126051 14 63046842 to 63046851 9 + TSS region transcription start site region 126051
Tssr126052 14 63046943 to 63046958 15 + TSS region transcription start site region 126052
Tssr126053 14 63046965 to 63046984 19 + TSS region transcription start site region 126053
Tssr126054 14 63046988 to 63047013 25 + TSS region transcription start site region 126054
Defb42 14 63046991 to 63048606 1615 + protein coding gene defensin beta 42
Tssr129125 14 63049873 to 63049882 9 - TSS region transcription start site region 129125
Tssr129126 14 63049891 to 63049901 10 - TSS region transcription start site region 129126
2700070H01Rik 14 63055073 to 63058149 3076 + lncRNA gene RIKEN cDNA 2700070H01 gene
Tssr126055 14 63055085 to 63055093 8 + TSS region transcription start site region 126055
Tssr126056 14 63055211 to 63055236 25 + TSS region transcription start site region 126056
Gm35908 14 63070642 to 63077375 6733 + lncRNA gene predicted gene, 35908
Tssr129127 14 63070643 to 63070646 3 - TSS region transcription start site region 129127
Tssr126057 14 63082426 to 63082428 2 + TSS region transcription start site region 126057
Gm36025 14 63092059 to 63104187 12128 - lncRNA gene predicted gene, 36025
Gm17941 14 63095338 to 63097115 1777 + pseudogene predicted gene, 17941
Gm23629 14 63099536 to 63099642 106 + snRNA gene predicted gene, 23629
Tssr129128 14 63103999 to 63104029 30 - TSS region transcription start site region 129128
Tssr129129 14 63104186 to 63104221 35 - TSS region transcription start site region 129129
Cpgi6598 14 63122414 to 63122965 551 CpG island CpG island 6598
Tssr126058 14 63122450 to 63122459 9 + TSS region transcription start site region 126058
Ctsb 14 63122462 to 63145923 23461 + protein coding gene cathepsin B
Tssr126059 14 63122466 to 63122477 11 + TSS region transcription start site region 126059
Tssr126060 14 63122480 to 63122495 15 + TSS region transcription start site region 126060
Tssr126061 14 63122506 to 63122525 19 + TSS region transcription start site region 126061
Tssr126062 14 63122683 to 63122706 23 + TSS region transcription start site region 126062
Tssr126063 14 63122885 to 63122936 51 + TSS region transcription start site region 126063
Tssr126064 14 63123882 to 63123916 34 + TSS region transcription start site region 126064
Tssr126065 14 63123918 to 63123996 78 + TSS region transcription start site region 126065
Tssr126066 14 63124534 to 63124589 55 + TSS region transcription start site region 126066
Tssr126067 14 63124593 to 63124622 29 + TSS region transcription start site region 126067
Tssr126068 14 63125484 to 63125489 5 + TSS region transcription start site region 126068
Tssr129130 14 63128706 to 63128733 27 - TSS region transcription start site region 129130
Tssr126069 14 63129286 to 63129296 10 + TSS region transcription start site region 126069
Tssr126070 14 63129320 to 63129342 22 + TSS region transcription start site region 126070
Tssr126071 14 63129368 to 63129382 14 + TSS region transcription start site region 126071
Tssr126072 14 63129385 to 63129402 17 + TSS region transcription start site region 126072
Tssr129131 14 63130738 to 63130750 12 - TSS region transcription start site region 129131
Tssr126073 14 63130891 to 63130922 31 + TSS region transcription start site region 126073
Tssr126074 14 63130928 to 63130945 17 + TSS region transcription start site region 126074
Tssr126075 14 63132491 to 63132504 13 + TSS region transcription start site region 126075
Tssr126076 14 63132523 to 63132563 40 + TSS region transcription start site region 126076
Tssr126077 14 63132614 to 63132651 37 + TSS region transcription start site region 126077
Tssr126078 14 63133301 to 63133312 11 + TSS region transcription start site region 126078
Tssr126079 14 63133336 to 63133360 24 + TSS region transcription start site region 126079
Tssr126080 14 63133384 to 63133440 56 + TSS region transcription start site region 126080
Tssr129132 14 63133444 to 63133482 38 - TSS region transcription start site region 129132
Tssr126081 14 63133966 to 63134032 66 + TSS region transcription start site region 126081
Tssr126082 14 63134919 to 63134935 16 + TSS region transcription start site region 126082
Tssr126083 14 63135492 to 63135505 13 + TSS region transcription start site region 126083
Tssr126084 14 63135532 to 63135543 11 + TSS region transcription start site region 126084
Tssr126085 14 63135605 to 63135643 38 + TSS region transcription start site region 126085
Tssr129133 14 63135627 to 63135677 50 - TSS region transcription start site region 129133
Tssr126086 14 63136402 to 63136499 97 + TSS region transcription start site region 126086
Tssr129134 14 63136463 to 63136505 42 - TSS region transcription start site region 129134
Tssr129135 14 63136515 to 63136531 16 - TSS region transcription start site region 129135
Tssr126087 14 63138027 to 63138096 69 + TSS region transcription start site region 126087
Tssr129136 14 63138067 to 63138092 25 - TSS region transcription start site region 129136
Tssr126088 14 63138347 to 63138360 13 + TSS region transcription start site region 126088
Tssr126089 14 63138386 to 63138410 24 + TSS region transcription start site region 126089
Tssr126090 14 63138413 to 63138422 9 + TSS region transcription start site region 126090
Tssr129137 14 63138415 to 63138434 19 - TSS region transcription start site region 129137
Tssr126091 14 63138444 to 63138469 25 + TSS region transcription start site region 126091
Tssr129138 14 63138481 to 63138500 19 - TSS region transcription start site region 129138
Tssr126092 14 63138986 to 63139058 72 + TSS region transcription start site region 126092
Tssr129139 14 63139029 to 63139072 43 - TSS region transcription start site region 129139
Tssr126093 14 63139061 to 63139063 2 + TSS region transcription start site region 126093
Tssr126094 14 63139065 to 63139087 22 + TSS region transcription start site region 126094
Tssr126095 14 63139091 to 63139096 5 + TSS region transcription start site region 126095
Tssr126096 14 63140466 to 63140480 14 + TSS region transcription start site region 126096
Tssr126097 14 63140485 to 63140508 23 + TSS region transcription start site region 126097
Tssr126098 14 63140674 to 63140702 28 + TSS region transcription start site region 126098
Tssr126099 14 63140852 to 63140885 33 + TSS region transcription start site region 126099
Tssr126100 14 63141729 to 63141742 13 + TSS region transcription start site region 126100
Tssr129140 14 63141757 to 63141780 23 - TSS region transcription start site region 129140
Tssr126101 14 63141760 to 63141781 21 + TSS region transcription start site region 126101
Tssr126102 14 63141789 to 63141835 46 + TSS region transcription start site region 126102
Tssr129141 14 63141796 to 63141821 25 - TSS region transcription start site region 129141
Tssr129142 14 63141862 to 63141870 8 - TSS region transcription start site region 129142
Tssr126103 14 63142283 to 63142297 14 + TSS region transcription start site region 126103
Tssr126104 14 63142311 to 63142340 29 + TSS region transcription start site region 126104
Tssr126105 14 63142357 to 63142375 18 + TSS region transcription start site region 126105
Tssr129143 14 63142366 to 63142373 7 - TSS region transcription start site region 129143
Tssr129144 14 63142394 to 63142410 16 - TSS region transcription start site region 129144
Tssr126106 14 63142402 to 63142440 38 + TSS region transcription start site region 126106
Tssr129145 14 63142412 to 63142427 15 - TSS region transcription start site region 129145
Tssr129146 14 63142461 to 63142465 4 - TSS region transcription start site region 129146
Tssr129147 14 63142497 to 63142524 27 - TSS region transcription start site region 129147
Tssr129148 14 63142530 to 63142547 17 - TSS region transcription start site region 129148
Tssr126107 14 63142583 to 63142649 66 + TSS region transcription start site region 126107
Tssr129149 14 63142623 to 63142651 28 - TSS region transcription start site region 129149
Tssr129150 14 63142655 to 63142679 24 - TSS region transcription start site region 129150
Tssr126108 14 63142661 to 63142702 41 + TSS region transcription start site region 126108
Tssr129151 14 63142684 to 63142711 27 - TSS region transcription start site region 129151
Tssr126109 14 63142706 to 63142750 44 + TSS region transcription start site region 126109
Tssr129152 14 63142716 to 63142726 10 - TSS region transcription start site region 129152
Tssr126110 14 63142759 to 63142785 26 + TSS region transcription start site region 126110
Tssr126111 14 63142797 to 63142813 16 + TSS region transcription start site region 126111
Tssr126112 14 63142814 to 63142834 20 + TSS region transcription start site region 126112
Tssr126113 14 63142852 to 63142877 25 + TSS region transcription start site region 126113
Tssr126114 14 63142889 to 63142900 11 + TSS region transcription start site region 126114
Tssr126115 14 63142903 to 63142915 12 + TSS region transcription start site region 126115
Tssr129153 14 63142931 to 63142936 5 - TSS region transcription start site region 129153
Tssr126116 14 63142937 to 63142962 25 + TSS region transcription start site region 126116
Tssr129154 14 63142960 to 63142971 11 - TSS region transcription start site region 129154
Tssr126117 14 63142999 to 63143007 8 + TSS region transcription start site region 126117
Tssr129155 14 63143035 to 63143046 11 - TSS region transcription start site region 129155
Tssr126118 14 63143062 to 63143068 6 + TSS region transcription start site region 126118
Tssr129156 14 63143127 to 63143138 11 - TSS region transcription start site region 129156
Tssr126119 14 63143174 to 63143189 15 + TSS region transcription start site region 126119
Tssr126120 14 63143644 to 63143660 16 + TSS region transcription start site region 126120
Tssr129157 14 63144739 to 63144752 13 - TSS region transcription start site region 129157
Fdft1 14 63145150 to 63179578 34428 - protein coding gene farnesyl diphosphate farnesyl transferase 1
Cpgi6599 14 63164517 to 63165014 497 CpG island CpG island 6599
Tssr129158 14 63164668 to 63164685 17 - TSS region transcription start site region 129158
Tssr129159 14 63164925 to 63164941 16 - TSS region transcription start site region 129159
Tssr129160 14 63164947 to 63164962 15 - TSS region transcription start site region 129160
Tssr129161 14 63164967 to 63164980 13 - TSS region transcription start site region 129161
Tssr129162 14 63171360 to 63171361 1 - TSS region transcription start site region 129162
Cpgi6600 14 63177554 to 63178529 975 CpG island CpG island 6600
Tssr4449 14 63177786 to 63177795 9 - TSS region transcription start site region 4449
Tssr129163 14 63177804 to 63177889 85 - TSS region transcription start site region 129163
Tssr129164 14 63177906 to 63177961 55 - TSS region transcription start site region 129164
Neil2 14 63182443 to 63193856 11413 - protein coding gene nei like 2 (E. coli)
Tssr129165 14 63191933 to 63191937 4 - TSS region transcription start site region 129165
Cpgi6601 14 63193439 to 63193956 517 CpG island CpG island 6601
Tssr129166 14 63193488 to 63193508 20 - TSS region transcription start site region 129166
Gata4 14 63198922 to 63271692 72770 - protein coding gene GATA binding protein 4
Tssr129167 14 63199258 to 63199284 26 - TSS region transcription start site region 129167
Cpgi6602 14 63240054 to 63241704 1650 CpG island CpG island 6602
Cpgi6603 14 63245025 to 63246157 1132 CpG island CpG island 6603
Tssr129168 14 63245219 to 63245265 46 - TSS region transcription start site region 129168
Tssr129169 14 63245273 to 63245278 5 - TSS region transcription start site region 129169
Tssr129170 14 63245500 to 63245544 44 - TSS region transcription start site region 129170
Cpgi6604 14 63246386 to 63246714 328 CpG island CpG island 6604
Tssr126121 14 63248043 to 63248063 20 + TSS region transcription start site region 126121
Cpgi6605 14 63251494 to 63251980 486 CpG island CpG island 6605
Cpgi6606 14 63255517 to 63256501 984 CpG island CpG island 6606
Tssr129171 14 63256597 to 63256632 35 - TSS region transcription start site region 129171
Cpgi6607 14 63268040 to 63268917 877 CpG island CpG island 6607
Tssr126122 14 63269168 to 63269180 12 + TSS region transcription start site region 126122
Tssr129172 14 63271622 to 63271647 25 - TSS region transcription start site region 129172
Tssr129173 14 63271654 to 63271679 25 - TSS region transcription start site region 129173
Tssr129174 14 63271682 to 63271702 20 - TSS region transcription start site region 129174
Tssr129175 14 63271708 to 63271723 15 - TSS region transcription start site region 129175
Tssr129176 14 63271823 to 63271850 27 - TSS region transcription start site region 129176
Tssr129177 14 63271854 to 63271881 27 - TSS region transcription start site region 129177
Gm4151 14 63308919 to 63358503 49584 + unclassified gene predicted gene 4151
Tssr126123 14 63317713 to 63317731 18 + TSS region transcription start site region 126123
Tssr126124 14 63317732 to 63317748 16 + TSS region transcription start site region 126124
Gm49390 14 63317745 to 63336957 19212 + lincRNA gene predicted gene, 49390
Tssr129178 14 63321532 to 63321543 11 - TSS region transcription start site region 129178
Tssr129179 14 63321544 to 63321551 7 - TSS region transcription start site region 129179
Tssr129180 14 63321564 to 63321569 5 - TSS region transcription start site region 129180
Gm5463 14 63329220 to 63345635 16415 + lincRNA gene predicted gene 5463
Cpgi6608 14 63338515 to 63338699 184 CpG island CpG island 6608
Tssr126125 14 63339966 to 63339972 6 + TSS region transcription start site region 126125
Tssr129181 14 63349524 to 63349526 2 - TSS region transcription start site region 129181
Gm36165 14 63358672 to 63373196 14524 + lncRNA gene predicted gene, 36165
Gm46458 14 63360335 to 63371584 11249 - lncRNA gene predicted gene, 46458
Tssr126126 14 63370609 to 63370622 13 + TSS region transcription start site region 126126
Tssr129182 14 63371142 to 63371153 11 - TSS region transcription start site region 129182
Blk 14 63372836 to 63417037 44201 - protein coding gene B lymphoid kinase
Tssr129183 14 63377871 to 63377898 27 - TSS region transcription start site region 129183
Tssr129184 14 63405228 to 63405241 13 - TSS region transcription start site region 129184
Tssr129185 14 63405251 to 63405262 11 - TSS region transcription start site region 129185
Tssr129186 14 63416817 to 63416845 28 - TSS region transcription start site region 129186
Tssr126127 14 63416975 to 63416982 7 + TSS region transcription start site region 126127
Tssr129187 14 63417029 to 63417059 30 - TSS region transcription start site region 129187
Tssr129188 14 63417073 to 63417084 11 - TSS region transcription start site region 129188
Tssr129189 14 63417125 to 63417138 13 - TSS region transcription start site region 129189
Tssr129190 14 63418447 to 63418474 27 - TSS region transcription start site region 129190
Tssr129191 14 63418820 to 63418835 15 - TSS region transcription start site region 129191
Tssr129192 14 63419539 to 63419567 28 - TSS region transcription start site region 129192
Gm21430 14 63428733 to 63429730 997 - pseudogene predicted gene, 21430
Cpgi6609 14 63435672 to 63436795 1123 CpG island CpG island 6609
Fam167a 14 63436394 to 63465498 29104 + protein coding gene family with sequence similarity 167, member A
Tssr129193 14 63436431 to 63436440 9 - TSS region transcription start site region 129193
Tssr126128 14 63436490 to 63436525 35 + TSS region transcription start site region 126128
Tssr126129 14 63436531 to 63436548 17 + TSS region transcription start site region 126129
Tssr129194 14 63438068 to 63438082 14 - TSS region transcription start site region 129194
D14Mit1003 14 63442735 to 63442878 143 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 1003
Tssr126130 14 63451457 to 63451469 12 + TSS region transcription start site region 126130
Tssr126131 14 63451472 to 63451501 29 + TSS region transcription start site region 126131
Gm47074 14 63475117 to 63475376 259 - pseudogene predicted gene, 47074
Tdh 14 63492347 to 63509092 16745 - protein coding gene L-threonine dehydrogenase