Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:62727690-63071509

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83 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ints6 14 62676330 to 62761169 84839 - protein coding gene integrator complex subunit 6
Cpgi6595 14 62759535 to 62761884 2349 CpG island CpG island 6595
Tssr126010 14 62760464 to 62760484 20 + TSS region transcription start site region 126010
Tssr126011 14 62760485 to 62760493 8 + TSS region transcription start site region 126011
Tssr126012 14 62760496 to 62760521 25 + TSS region transcription start site region 126012
4931440J10Rik 14 62760501 to 62830126 69625 + lincRNA gene RIKEN cDNA 4931440J10 gene
Tssr129115 14 62760888 to 62760901 13 - TSS region transcription start site region 129115
Tssr4448 14 62761112 to 62761121 9 - TSS region transcription start site region 4448
Tssr129116 14 62761127 to 62761145 18 - TSS region transcription start site region 129116
Tssr126013 14 62761757 to 62761782 25 + TSS region transcription start site region 126013
Gm35678 14 62773250 to 62799664 26414 - lncRNA gene predicted gene, 35678
Gm18146 14 62779697 to 62780210 513 + pseudogene predicted gene, 18146
Gm47505 14 62818843 to 62819642 799 + pseudogene predicted gene, 47505
Gm26536 14 62836908 to 62838207 1299 - lincRNA gene predicted gene, 26536
Cpgi6596 14 62837116 to 62838318 1202 CpG island CpG island 6596
Tssr126014 14 62837679 to 62837726 47 + TSS region transcription start site region 126014
Wdfy2 14 62837690 to 62961509 123819 + protein coding gene WD repeat and FYVE domain containing 2
Mir8098 14 62837721 to 62837857 136 + miRNA gene microRNA 8098
Tssr126015 14 62837729 to 62837754 25 + TSS region transcription start site region 126015
Tssr126016 14 62837759 to 62837770 11 + TSS region transcription start site region 126016
Tssr129117 14 62838495 to 62838540 45 - TSS region transcription start site region 129117
Tssr126017 14 62838626 to 62838677 51 + TSS region transcription start site region 126017
Tssr126018 14 62857180 to 62857193 13 + TSS region transcription start site region 126018
Tssr126019 14 62857422 to 62857438 16 + TSS region transcription start site region 126019
Tssr126020 14 62857505 to 62857525 20 + TSS region transcription start site region 126020
Tssr126021 14 62857561 to 62857594 33 + TSS region transcription start site region 126021
Tssr126022 14 62858578 to 62858602 24 + TSS region transcription start site region 126022
Tssr126023 14 62862513 to 62862517 4 + TSS region transcription start site region 126023
Tssr126024 14 62865307 to 62865342 35 + TSS region transcription start site region 126024
Mir6541 14 62865542 to 62865651 109 + miRNA gene microRNA 6541
Tssr126025 14 62865638 to 62865664 26 + TSS region transcription start site region 126025
n-R5s47 14 62869714 to 62869832 118 + rRNA gene nuclear encoded rRNA 5S 47
Tssr126026 14 62882030 to 62882036 6 + TSS region transcription start site region 126026
Tssr126027 14 62886550 to 62886580 30 + TSS region transcription start site region 126027
Tssr126028 14 62887217 to 62887236 19 + TSS region transcription start site region 126028
Tssr126029 14 62887250 to 62887265 15 + TSS region transcription start site region 126029
Tssr126030 14 62894080 to 62894098 18 + TSS region transcription start site region 126030
Tssr126031 14 62906857 to 62906895 38 + TSS region transcription start site region 126031
Tssr126032 14 62917836 to 62917841 5 + TSS region transcription start site region 126032
Tssr126033 14 62926444 to 62926456 12 + TSS region transcription start site region 126033
Tssr126034 14 62935055 to 62935064 9 + TSS region transcription start site region 126034
Tssr126035 14 62960680 to 62960708 28 + TSS region transcription start site region 126035
Tssr129118 14 62966183 to 62966188 5 - TSS region transcription start site region 129118
Tssr129119 14 62966191 to 62966200 9 - TSS region transcription start site region 129119
Tssr129120 14 62966211 to 62966225 14 - TSS region transcription start site region 129120
Gm21021 14 62973790 to 62974975 1185 + pseudogene predicted gene, 21021
Defb48 14 62977524 to 62984510 6986 - protein coding gene defensin beta 48
Tssr129121 14 62984502 to 62984512 10 - TSS region transcription start site region 129121
Tssr126036 14 62992305 to 62992311 6 + TSS region transcription start site region 126036
Tssr126037 14 62992346 to 62992347 1 + TSS region transcription start site region 126037
Tssr126038 14 62992364 to 62992373 9 + TSS region transcription start site region 126038
Tssr126039 14 62992377 to 62992392 15 + TSS region transcription start site region 126039
Tssr126040 14 62992393 to 62992411 18 + TSS region transcription start site region 126040
Tssr126041 14 62992435 to 62992438 3 + TSS region transcription start site region 126041
Tssr126042 14 62992466 to 62992475 9 + TSS region transcription start site region 126042
Tssr126043 14 62998063 to 62998081 18 + TSS region transcription start site region 126043
Defb47 14 62998077 to 63001160 3083 + protein coding gene defensin beta 47
Tssr126044 14 63003387 to 63003396 9 + TSS region transcription start site region 126044
Tssr129122 14 63008719 to 63008727 8 - TSS region transcription start site region 129122
Tssr126045 14 63011649 to 63011656 7 + TSS region transcription start site region 126045
Tssr126046 14 63011682 to 63011692 10 + TSS region transcription start site region 126046
Tssr126047 14 63011694 to 63011699 5 + TSS region transcription start site region 126047
Tssr126048 14 63011729 to 63011740 11 + TSS region transcription start site region 126048
Tssr126049 14 63011750 to 63011763 13 + TSS region transcription start site region 126049
Tssr126050 14 63011765 to 63011775 10 + TSS region transcription start site region 126050
Defb43 14 63011771 to 63018088 6317 + protein coding gene defensin beta 43
Gm19198 14 63025130 to 63025711 581 - pseudogene predicted gene, 19198
Cpgi6597 14 63025454 to 63025842 388 CpG island CpG island 6597
Defb30 14 63034087 to 63037846 3759 - protein coding gene defensin beta 30
Tssr129123 14 63034826 to 63034833 7 - TSS region transcription start site region 129123
Tssr129124 14 63037841 to 63037871 30 - TSS region transcription start site region 129124
Tssr126051 14 63046842 to 63046851 9 + TSS region transcription start site region 126051
Tssr126052 14 63046943 to 63046958 15 + TSS region transcription start site region 126052
Tssr126053 14 63046965 to 63046984 19 + TSS region transcription start site region 126053
Tssr126054 14 63046988 to 63047013 25 + TSS region transcription start site region 126054
Defb42 14 63046991 to 63048606 1615 + protein coding gene defensin beta 42
Tssr129125 14 63049873 to 63049882 9 - TSS region transcription start site region 129125
Tssr129126 14 63049891 to 63049901 10 - TSS region transcription start site region 129126
2700070H01Rik 14 63055073 to 63058149 3076 + lncRNA gene RIKEN cDNA 2700070H01 gene
Tssr126055 14 63055085 to 63055093 8 + TSS region transcription start site region 126055
Tssr126056 14 63055211 to 63055236 25 + TSS region transcription start site region 126056
Gm35908 14 63070642 to 63077375 6733 + lncRNA gene predicted gene, 35908
Tssr129127 14 63070643 to 63070646 3 - TSS region transcription start site region 129127