Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:61865454-64185842

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392 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Del(14Trim13-Rnaseh2b)6Rdf 14 61598247 to 62372992 774745 chromosomal deletion deletion, Chr 14, Riccardo Dalla-Favera 6
Ebao3 14 61891444 to 61891444 0 QTL epidermolysis bullosa acquisita onset 3
Gm47952 14 61921376 to 61922063 687 + pseudogene predicted gene, 47952
Tssr126001 14 61959903 to 61959912 9 + TSS region transcription start site region 126001
Gm47953 14 62012319 to 62012633 314 + pseudogene predicted gene, 47953
Gm35307 14 62034867 to 62038927 4060 + lncRNA gene predicted gene, 35307
Gm35419 14 62120272 to 62171005 50733 - lincRNA gene predicted gene, 35419
Gm35361 14 62146811 to 62147539 728 + lncRNA gene predicted gene, 35361
Gm26969 14 62201915 to 62204352 2437 - lincRNA gene predicted gene, 26969
Dleu7 14 62276229 to 62292979 16750 - protein coding gene deleted in lymphocytic leukemia, 7
Cpgi6588 14 62292366 to 62293211 845 CpG island CpG island 6588
Tssr126002 14 62292475 to 62292496 21 + TSS region transcription start site region 126002
Tssr129101 14 62292959 to 62293019 60 - TSS region transcription start site region 129101
Tssr129102 14 62293177 to 62293213 36 - TSS region transcription start site region 129102
Tssr129103 14 62293228 to 62293240 12 - TSS region transcription start site region 129103
Gm41173 14 62327882 to 62332043 4161 - lncRNA gene predicted gene, 41173
Cpgi6589 14 62331710 to 62332589 879 CpG island CpG island 6589
Tssr126003 14 62332085 to 62332110 25 + TSS region transcription start site region 126003
Rnaseh2b 14 62332105 to 62372992 40887 + protein coding gene ribonuclease H2, subunit B
Tssr129104 14 62346993 to 62347004 11 - TSS region transcription start site region 129104
Tssr129105 14 62347027 to 62347030 3 - TSS region transcription start site region 129105
Gm46457 14 62379184 to 62392563 13379 + lncRNA gene predicted gene, 46457
D14Mit37 14 62383443 to 62383581 138 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 37
Gucy1b2 14 62392676 to 62456289 63613 - protein coding gene guanylate cyclase 1, soluble, beta 2
Tssr129106 14 62411813 to 62411817 4 - TSS region transcription start site region 129106
Tssr126004 14 62413556 to 62413567 11 + TSS region transcription start site region 126004
Tssr129107 14 62414279 to 62414327 48 - TSS region transcription start site region 129107
Tssr129108 14 62414493 to 62414507 14 - TSS region transcription start site region 129108
Gm35468 14 62440284 to 62446721 6437 + lncRNA gene predicted gene, 35468
Gm41172 14 62456467 to 62459180 2713 + lncRNA gene predicted gene, 41172
Cpgi6590 14 62457481 to 62457694 213 CpG island CpG island 6590
Gm4131 14 62462486 to 62481765 19279 - protein coding gene predicted gene 4131
Cpgi6591 14 62464829 to 62465003 174 CpG island CpG island 6591
Tssr129109 14 62465061 to 62465072 11 - TSS region transcription start site region 129109
Cpgi6592 14 62481021 to 62481320 299 CpG island CpG island 6592
Tssr129110 14 62481133 to 62481143 10 - TSS region transcription start site region 129110
Tssr129111 14 62497335 to 62497342 7 - TSS region transcription start site region 129111
Tssr126005 14 62497561 to 62497572 11 + TSS region transcription start site region 126005
Gm46482 14 62506860 to 62515217 8357 + lncRNA gene predicted gene, 46482
Gm6076 14 62514848 to 62515295 447 - pseudogene predicted gene 6076
Gm24625 14 62521023 to 62521152 129 + snoRNA gene predicted gene, 24625
Tssr129112 14 62531034 to 62531072 38 - TSS region transcription start site region 129112
Tssr129113 14 62531073 to 62531086 13 - TSS region transcription start site region 129113
Gm5802 14 62540493 to 62541193 700 - pseudogene predicted gene 5802
Gm35595 14 62541380 to 62541575 195 - protein coding gene predicted gene, 35595
Cpgi6593 14 62555332 to 62556383 1051 CpG island CpG island 6593
Tssr126006 14 62555620 to 62555633 13 + TSS region transcription start site region 126006
Tssr126007 14 62555642 to 62555699 57 + TSS region transcription start site region 126007
Fam124a 14 62555737 to 62608486 52749 + protein coding gene family with sequence similarity 124, member A
Tssr126008 14 62555738 to 62555812 74 + TSS region transcription start site region 126008
Cpgi6594 14 62587146 to 62587889 743 CpG island CpG island 6594
Gm23816 14 62634962 to 62635093 131 - snoRNA gene predicted gene, 23816
Tssr4447 14 62654265 to 62654267 2 + TSS region transcription start site region 4447
Tssr126009 14 62663665 to 62663672 7 + TSS region transcription start site region 126009
Serpine3 14 62663667 to 62692243 28576 + protein coding gene serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3
Gm25162 14 62668612 to 62668770 158 + snoRNA gene predicted gene, 25162
Ints6 14 62676330 to 62761169 84839 - protein coding gene integrator complex subunit 6
Tssr129114 14 62700654 to 62700701 47 - TSS region transcription start site region 129114
Cpgi6595 14 62759535 to 62761884 2349 CpG island CpG island 6595
Tssr126010 14 62760464 to 62760484 20 + TSS region transcription start site region 126010
Tssr126011 14 62760485 to 62760493 8 + TSS region transcription start site region 126011
Tssr126012 14 62760496 to 62760521 25 + TSS region transcription start site region 126012
4931440J10Rik 14 62760501 to 62830126 69625 + lincRNA gene RIKEN cDNA 4931440J10 gene
Tssr129115 14 62760888 to 62760901 13 - TSS region transcription start site region 129115
Tssr4448 14 62761112 to 62761121 9 - TSS region transcription start site region 4448
Tssr129116 14 62761127 to 62761145 18 - TSS region transcription start site region 129116
Tssr126013 14 62761757 to 62761782 25 + TSS region transcription start site region 126013
Gm35678 14 62773250 to 62799664 26414 - lncRNA gene predicted gene, 35678
Gm18146 14 62779697 to 62780210 513 + pseudogene predicted gene, 18146
Gm47505 14 62818843 to 62819642 799 + pseudogene predicted gene, 47505
Gm26536 14 62836908 to 62838207 1299 - lincRNA gene predicted gene, 26536
Cpgi6596 14 62837116 to 62838318 1202 CpG island CpG island 6596
Tssr126014 14 62837679 to 62837726 47 + TSS region transcription start site region 126014
Wdfy2 14 62837690 to 62961509 123819 + protein coding gene WD repeat and FYVE domain containing 2
Mir8098 14 62837721 to 62837857 136 + miRNA gene microRNA 8098
Tssr126015 14 62837729 to 62837754 25 + TSS region transcription start site region 126015
Tssr126016 14 62837759 to 62837770 11 + TSS region transcription start site region 126016
Tssr129117 14 62838495 to 62838540 45 - TSS region transcription start site region 129117
Tssr126017 14 62838626 to 62838677 51 + TSS region transcription start site region 126017
Tssr126018 14 62857180 to 62857193 13 + TSS region transcription start site region 126018
Tssr126019 14 62857422 to 62857438 16 + TSS region transcription start site region 126019
Tssr126020 14 62857505 to 62857525 20 + TSS region transcription start site region 126020
Tssr126021 14 62857561 to 62857594 33 + TSS region transcription start site region 126021
Tssr126022 14 62858578 to 62858602 24 + TSS region transcription start site region 126022
Tssr126023 14 62862513 to 62862517 4 + TSS region transcription start site region 126023
Tssr126024 14 62865307 to 62865342 35 + TSS region transcription start site region 126024
Mir6541 14 62865542 to 62865651 109 + miRNA gene microRNA 6541
Tssr126025 14 62865638 to 62865664 26 + TSS region transcription start site region 126025
n-R5s47 14 62869714 to 62869832 118 + rRNA gene nuclear encoded rRNA 5S 47
Tssr126026 14 62882030 to 62882036 6 + TSS region transcription start site region 126026
Tssr126027 14 62886550 to 62886580 30 + TSS region transcription start site region 126027
Tssr126028 14 62887217 to 62887236 19 + TSS region transcription start site region 126028
Tssr126029 14 62887250 to 62887265 15 + TSS region transcription start site region 126029
Tssr126030 14 62894080 to 62894098 18 + TSS region transcription start site region 126030
Tssr126031 14 62906857 to 62906895 38 + TSS region transcription start site region 126031
Tssr126032 14 62917836 to 62917841 5 + TSS region transcription start site region 126032
Tssr126033 14 62926444 to 62926456 12 + TSS region transcription start site region 126033
Tssr126034 14 62935055 to 62935064 9 + TSS region transcription start site region 126034
Tssr126035 14 62960680 to 62960708 28 + TSS region transcription start site region 126035
Tssr129118 14 62966183 to 62966188 5 - TSS region transcription start site region 129118
Tssr129119 14 62966191 to 62966200 9 - TSS region transcription start site region 129119
Tssr129120 14 62966211 to 62966225 14 - TSS region transcription start site region 129120
Gm21021 14 62973790 to 62974975 1185 + pseudogene predicted gene, 21021
Defb48 14 62977524 to 62984510 6986 - protein coding gene defensin beta 48
Tssr129121 14 62984502 to 62984512 10 - TSS region transcription start site region 129121
Tssr126036 14 62992305 to 62992311 6 + TSS region transcription start site region 126036
Tssr126037 14 62992346 to 62992347 1 + TSS region transcription start site region 126037
Tssr126038 14 62992364 to 62992373 9 + TSS region transcription start site region 126038
Tssr126039 14 62992377 to 62992392 15 + TSS region transcription start site region 126039
Tssr126040 14 62992393 to 62992411 18 + TSS region transcription start site region 126040
Tssr126041 14 62992435 to 62992438 3 + TSS region transcription start site region 126041
Tssr126042 14 62992466 to 62992475 9 + TSS region transcription start site region 126042
Tssr126043 14 62998063 to 62998081 18 + TSS region transcription start site region 126043
Defb47 14 62998077 to 63001160 3083 + protein coding gene defensin beta 47
Tssr126044 14 63003387 to 63003396 9 + TSS region transcription start site region 126044
Tssr129122 14 63008719 to 63008727 8 - TSS region transcription start site region 129122
Tssr126045 14 63011649 to 63011656 7 + TSS region transcription start site region 126045
Tssr126046 14 63011682 to 63011692 10 + TSS region transcription start site region 126046
Tssr126047 14 63011694 to 63011699 5 + TSS region transcription start site region 126047
Tssr126048 14 63011729 to 63011740 11 + TSS region transcription start site region 126048
Tssr126049 14 63011750 to 63011763 13 + TSS region transcription start site region 126049
Tssr126050 14 63011765 to 63011775 10 + TSS region transcription start site region 126050
Defb43 14 63011771 to 63018088 6317 + protein coding gene defensin beta 43
Gm19198 14 63025130 to 63025711 581 - pseudogene predicted gene, 19198
Cpgi6597 14 63025454 to 63025842 388 CpG island CpG island 6597
Defb30 14 63034087 to 63037846 3759 - protein coding gene defensin beta 30
Tssr129123 14 63034826 to 63034833 7 - TSS region transcription start site region 129123
Tssr129124 14 63037841 to 63037871 30 - TSS region transcription start site region 129124
Tssr126051 14 63046842 to 63046851 9 + TSS region transcription start site region 126051
Tssr126052 14 63046943 to 63046958 15 + TSS region transcription start site region 126052
Tssr126053 14 63046965 to 63046984 19 + TSS region transcription start site region 126053
Tssr126054 14 63046988 to 63047013 25 + TSS region transcription start site region 126054
Defb42 14 63046991 to 63048606 1615 + protein coding gene defensin beta 42
Tssr129125 14 63049873 to 63049882 9 - TSS region transcription start site region 129125
Tssr129126 14 63049891 to 63049901 10 - TSS region transcription start site region 129126
2700070H01Rik 14 63055073 to 63058149 3076 + lncRNA gene RIKEN cDNA 2700070H01 gene
Tssr126055 14 63055085 to 63055093 8 + TSS region transcription start site region 126055
Tssr126056 14 63055211 to 63055236 25 + TSS region transcription start site region 126056
Gm35908 14 63070642 to 63077375 6733 + lncRNA gene predicted gene, 35908
Tssr129127 14 63070643 to 63070646 3 - TSS region transcription start site region 129127
Tssr126057 14 63082426 to 63082428 2 + TSS region transcription start site region 126057
Gm36025 14 63092059 to 63104187 12128 - lncRNA gene predicted gene, 36025
Gm17941 14 63095338 to 63097115 1777 + pseudogene predicted gene, 17941
Gm23629 14 63099536 to 63099642 106 + snRNA gene predicted gene, 23629
Tssr129128 14 63103999 to 63104029 30 - TSS region transcription start site region 129128
Tssr129129 14 63104186 to 63104221 35 - TSS region transcription start site region 129129
Cpgi6598 14 63122414 to 63122965 551 CpG island CpG island 6598
Tssr126058 14 63122450 to 63122459 9 + TSS region transcription start site region 126058
Ctsb 14 63122462 to 63145923 23461 + protein coding gene cathepsin B
Tssr126059 14 63122466 to 63122477 11 + TSS region transcription start site region 126059
Tssr126060 14 63122480 to 63122495 15 + TSS region transcription start site region 126060
Tssr126061 14 63122506 to 63122525 19 + TSS region transcription start site region 126061
Tssr126062 14 63122683 to 63122706 23 + TSS region transcription start site region 126062
Tssr126063 14 63122885 to 63122936 51 + TSS region transcription start site region 126063
Tssr126064 14 63123882 to 63123916 34 + TSS region transcription start site region 126064
Tssr126065 14 63123918 to 63123996 78 + TSS region transcription start site region 126065
Tssr126066 14 63124534 to 63124589 55 + TSS region transcription start site region 126066
Tssr126067 14 63124593 to 63124622 29 + TSS region transcription start site region 126067
Tssr126068 14 63125484 to 63125489 5 + TSS region transcription start site region 126068
Tssr129130 14 63128706 to 63128733 27 - TSS region transcription start site region 129130
Tssr126069 14 63129286 to 63129296 10 + TSS region transcription start site region 126069
Tssr126070 14 63129320 to 63129342 22 + TSS region transcription start site region 126070
Tssr126071 14 63129368 to 63129382 14 + TSS region transcription start site region 126071
Tssr126072 14 63129385 to 63129402 17 + TSS region transcription start site region 126072
Tssr129131 14 63130738 to 63130750 12 - TSS region transcription start site region 129131
Tssr126073 14 63130891 to 63130922 31 + TSS region transcription start site region 126073
Tssr126074 14 63130928 to 63130945 17 + TSS region transcription start site region 126074
Tssr126075 14 63132491 to 63132504 13 + TSS region transcription start site region 126075
Tssr126076 14 63132523 to 63132563 40 + TSS region transcription start site region 126076
Tssr126077 14 63132614 to 63132651 37 + TSS region transcription start site region 126077
Tssr126078 14 63133301 to 63133312 11 + TSS region transcription start site region 126078
Tssr126079 14 63133336 to 63133360 24 + TSS region transcription start site region 126079
Tssr126080 14 63133384 to 63133440 56 + TSS region transcription start site region 126080
Tssr129132 14 63133444 to 63133482 38 - TSS region transcription start site region 129132
Tssr126081 14 63133966 to 63134032 66 + TSS region transcription start site region 126081
Tssr126082 14 63134919 to 63134935 16 + TSS region transcription start site region 126082
Tssr126083 14 63135492 to 63135505 13 + TSS region transcription start site region 126083
Tssr126084 14 63135532 to 63135543 11 + TSS region transcription start site region 126084
Tssr126085 14 63135605 to 63135643 38 + TSS region transcription start site region 126085
Tssr129133 14 63135627 to 63135677 50 - TSS region transcription start site region 129133
Tssr126086 14 63136402 to 63136499 97 + TSS region transcription start site region 126086
Tssr129134 14 63136463 to 63136505 42 - TSS region transcription start site region 129134
Tssr129135 14 63136515 to 63136531 16 - TSS region transcription start site region 129135
Tssr126087 14 63138027 to 63138096 69 + TSS region transcription start site region 126087
Tssr129136 14 63138067 to 63138092 25 - TSS region transcription start site region 129136
Tssr126088 14 63138347 to 63138360 13 + TSS region transcription start site region 126088
Tssr126089 14 63138386 to 63138410 24 + TSS region transcription start site region 126089
Tssr126090 14 63138413 to 63138422 9 + TSS region transcription start site region 126090
Tssr129137 14 63138415 to 63138434 19 - TSS region transcription start site region 129137
Tssr126091 14 63138444 to 63138469 25 + TSS region transcription start site region 126091
Tssr129138 14 63138481 to 63138500 19 - TSS region transcription start site region 129138
Tssr126092 14 63138986 to 63139058 72 + TSS region transcription start site region 126092
Tssr129139 14 63139029 to 63139072 43 - TSS region transcription start site region 129139
Tssr126093 14 63139061 to 63139063 2 + TSS region transcription start site region 126093
Tssr126094 14 63139065 to 63139087 22 + TSS region transcription start site region 126094
Tssr126095 14 63139091 to 63139096 5 + TSS region transcription start site region 126095
Tssr126096 14 63140466 to 63140480 14 + TSS region transcription start site region 126096
Tssr126097 14 63140485 to 63140508 23 + TSS region transcription start site region 126097
Tssr126098 14 63140674 to 63140702 28 + TSS region transcription start site region 126098
Tssr126099 14 63140852 to 63140885 33 + TSS region transcription start site region 126099