Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:61524493-63304507

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343 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Spryd7 14 61531993 to 61556886 24893 - protein coding gene SPRY domain containing 7
Vmn1r-ps136 14 61543727 to 61544108 381 + pseudogene vomeronasal 1 receptor, pseudogene 136
Cpgi6582 14 61556210 to 61557741 1531 CpG island CpG island 6582
Tssr129083 14 61556632 to 61556641 9 - TSS region transcription start site region 129083
Tssr129084 14 61556665 to 61556674 9 - TSS region transcription start site region 129084
Tssr129085 14 61556723 to 61556741 18 - TSS region transcription start site region 129085
Tssr129086 14 61556746 to 61556781 35 - TSS region transcription start site region 129086
Tssr129087 14 61556783 to 61556797 14 - TSS region transcription start site region 129087
Tssr129088 14 61556881 to 61556890 9 - TSS region transcription start site region 129088
Gm4118 14 61558798 to 61559442 644 + pseudogene predicted gene 4118
Tssr125983 14 61598226 to 61598241 15 + TSS region transcription start site region 125983
Tssr125984 14 61598242 to 61598252 10 + TSS region transcription start site region 125984
Del(14Trim13-Rnaseh2b)6Rdf 14 61598247 to 62372992 774745 chromosomal deletion deletion, Chr 14, Riccardo Dalla-Favera 6
Del(14Trim13-Dleu2)3Rdf 14 61598247 to 61682373 84126 chromosomal deletion deletion, Chr 14, Riccardo Dalla-Favera 3
Del(14Trim13-Dleu2)4Rdf 14 61598247 to 61682373 84126 chromosomal deletion deletion, Chr 14, Riccardo Dalla-Favera 4
Trim13 14 61598247 to 61605946 7699 + protein coding gene tripartite motif-containing 13
Tssr125985 14 61598264 to 61598286 22 + TSS region transcription start site region 125985
Tssr125986 14 61598300 to 61598310 10 + TSS region transcription start site region 125986
Cpgi6583 14 61599234 to 61599791 557 CpG island CpG island 6583
Tssr125987 14 61599493 to 61599548 55 + TSS region transcription start site region 125987
Tssr125988 14 61599550 to 61599569 19 + TSS region transcription start site region 125988
Tssr125989 14 61599570 to 61599584 14 + TSS region transcription start site region 125989
Dleu2 14 61602839 to 61682373 79534 - lncRNA gene deleted in lymphocytic leukemia, 2
Tssr125990 14 61607415 to 61607426 11 + TSS region transcription start site region 125990
Tssr125991 14 61607455 to 61607458 3 + TSS region transcription start site region 125991
Kcnrg 14 61607457 to 61612826 5369 + protein coding gene potassium channel regulator
Tssr129089 14 61609867 to 61609870 3 - TSS region transcription start site region 129089
Tssr129090 14 61614873 to 61614877 4 - TSS region transcription start site region 129090
Gm27010 14 61625926 to 61627337 1411 - lincRNA gene predicted gene, 27010
Tssr129091 14 61626922 to 61626923 1 - TSS region transcription start site region 129091
Gm27845 14 61629093 to 61629206 113 + unclassified non-coding RNA gene predicted gene, 27845
Gm26916 14 61629484 to 61630414 930 + lincRNA gene predicted gene, 26916
Mir16-1 14 61631880 to 61631972 92 - miRNA gene microRNA 16-1
Mirc30 14 61631880 to 61632110 230 complex/cluster/region microRNA cluster 30, including Mir16-1 through Mir15a
Tssr129092 14 61631888 to 61631893 5 - TSS region transcription start site region 129092
Mir15a 14 61632027 to 61632110 83 - miRNA gene microRNA 15a
Tssr129093 14 61633134 to 61633138 4 - TSS region transcription start site region 129093
Tssr129094 14 61636072 to 61636120 48 - TSS region transcription start site region 129094
Gm27747 14 61643371 to 61643455 84 + unclassified non-coding RNA gene predicted gene, 27747
Cpgi6584 14 61647509 to 61649446 1937 CpG island CpG island 6584
Tssr125992 14 61648360 to 61648365 5 + TSS region transcription start site region 125992
Tssr125993 14 61648414 to 61648430 16 + TSS region transcription start site region 125993
Tssr125994 14 61648435 to 61648445 10 + TSS region transcription start site region 125994
Tssr125995 14 61648456 to 61648465 9 + TSS region transcription start site region 125995
Gm27972 14 61648638 to 61648774 136 + unclassified non-coding RNA gene predicted gene, 27972
Tssr129095 14 61648762 to 61648807 45 - TSS region transcription start site region 129095
Tssr129096 14 61648811 to 61648814 3 - TSS region transcription start site region 129096
Gm27017 14 61648950 to 61667312 18362 + lincRNA gene predicted gene, 27017
Tssr129097 14 61656812 to 61656816 4 - TSS region transcription start site region 129097
Gm27928 14 61666387 to 61666642 255 + unclassified non-coding RNA gene predicted gene, 27928
Gm37420 14 61667220 to 61670131 2911 - unclassified gene predicted gene, 37420
Gm37472 14 61677443 to 61681494 4051 - unclassified gene predicted gene, 37472
Cpgi6585 14 61680839 to 61683314 2475 CpG island CpG island 6585
Tssr125996 14 61680963 to 61680995 32 + TSS region transcription start site region 125996
Tssr125997 14 61681543 to 61681569 26 + TSS region transcription start site region 125997
Tssr125998 14 61681977 to 61681986 9 + TSS region transcription start site region 125998
Tssr129098 14 61682310 to 61682335 25 - TSS region transcription start site region 129098
Tssr125999 14 61682575 to 61682610 35 + TSS region transcription start site region 125999
Gm37820 14 61683510 to 61685656 2146 + unclassified gene predicted gene, 37820
Tssr129099 14 61683847 to 61683891 44 - TSS region transcription start site region 129099
Cpgi6586 14 61686102 to 61687378 1276 CpG island CpG island 6586
Gm35196 14 61686786 to 61690598 3812 - lncRNA gene predicted gene, 35196
Cpgi6587 14 61689343 to 61690064 721 CpG island CpG island 6587
Tssr129100 14 61690888 to 61690894 6 - TSS region transcription start site region 129100
Gm46480 14 61707016 to 61708794 1778 + lncRNA gene predicted gene, 46480
Tssr4445 14 61768102 to 61768106 4 + TSS region transcription start site region 4445
Tssr4446 14 61805170 to 61805171 1 + TSS region transcription start site region 4446
Gm35247 14 61817815 to 61822477 4662 + lncRNA gene predicted gene, 35247
Gm41171 14 61845334 to 61846707 1373 - lncRNA gene predicted gene, 41171
Tssr126000 14 61861676 to 61861684 8 + TSS region transcription start site region 126000
Ebao3 14 61891444 to 61891444 0 QTL epidermolysis bullosa acquisita onset 3
Gm47952 14 61921376 to 61922063 687 + pseudogene predicted gene, 47952
Tssr126001 14 61959903 to 61959912 9 + TSS region transcription start site region 126001
Gm47953 14 62012319 to 62012633 314 + pseudogene predicted gene, 47953
Gm35307 14 62034867 to 62038927 4060 + lncRNA gene predicted gene, 35307
Gm35419 14 62120272 to 62171005 50733 - lincRNA gene predicted gene, 35419
Gm35361 14 62146811 to 62147539 728 + lncRNA gene predicted gene, 35361
Gm26969 14 62201915 to 62204352 2437 - lincRNA gene predicted gene, 26969
Dleu7 14 62276229 to 62292979 16750 - protein coding gene deleted in lymphocytic leukemia, 7
Cpgi6588 14 62292366 to 62293211 845 CpG island CpG island 6588
Tssr126002 14 62292475 to 62292496 21 + TSS region transcription start site region 126002
Tssr129101 14 62292959 to 62293019 60 - TSS region transcription start site region 129101
Tssr129102 14 62293177 to 62293213 36 - TSS region transcription start site region 129102
Tssr129103 14 62293228 to 62293240 12 - TSS region transcription start site region 129103
Gm41173 14 62327882 to 62332043 4161 - lncRNA gene predicted gene, 41173
Cpgi6589 14 62331710 to 62332589 879 CpG island CpG island 6589
Tssr126003 14 62332085 to 62332110 25 + TSS region transcription start site region 126003
Rnaseh2b 14 62332105 to 62372992 40887 + protein coding gene ribonuclease H2, subunit B
Tssr129104 14 62346993 to 62347004 11 - TSS region transcription start site region 129104
Tssr129105 14 62347027 to 62347030 3 - TSS region transcription start site region 129105
Gm46457 14 62379184 to 62392563 13379 + lncRNA gene predicted gene, 46457
D14Mit37 14 62383443 to 62383581 138 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 37
Gucy1b2 14 62392676 to 62456289 63613 - protein coding gene guanylate cyclase 1, soluble, beta 2
Tssr129106 14 62411813 to 62411817 4 - TSS region transcription start site region 129106
Tssr126004 14 62413556 to 62413567 11 + TSS region transcription start site region 126004
Tssr129107 14 62414279 to 62414327 48 - TSS region transcription start site region 129107
Tssr129108 14 62414493 to 62414507 14 - TSS region transcription start site region 129108
Gm35468 14 62440284 to 62446721 6437 + lncRNA gene predicted gene, 35468
Gm41172 14 62456467 to 62459180 2713 + lncRNA gene predicted gene, 41172
Cpgi6590 14 62457481 to 62457694 213 CpG island CpG island 6590
Gm4131 14 62462486 to 62481765 19279 - protein coding gene predicted gene 4131
Cpgi6591 14 62464829 to 62465003 174 CpG island CpG island 6591
Tssr129109 14 62465061 to 62465072 11 - TSS region transcription start site region 129109
Cpgi6592 14 62481021 to 62481320 299 CpG island CpG island 6592
Tssr129110 14 62481133 to 62481143 10 - TSS region transcription start site region 129110
Tssr129111 14 62497335 to 62497342 7 - TSS region transcription start site region 129111
Tssr126005 14 62497561 to 62497572 11 + TSS region transcription start site region 126005
Gm46482 14 62506860 to 62515217 8357 + lncRNA gene predicted gene, 46482
Gm6076 14 62514848 to 62515295 447 - pseudogene predicted gene 6076
Gm24625 14 62521023 to 62521152 129 + snoRNA gene predicted gene, 24625
Tssr129112 14 62531034 to 62531072 38 - TSS region transcription start site region 129112
Tssr129113 14 62531073 to 62531086 13 - TSS region transcription start site region 129113
Gm5802 14 62540493 to 62541193 700 - pseudogene predicted gene 5802
Gm35595 14 62541380 to 62541575 195 - protein coding gene predicted gene, 35595
Cpgi6593 14 62555332 to 62556383 1051 CpG island CpG island 6593
Tssr126006 14 62555620 to 62555633 13 + TSS region transcription start site region 126006
Tssr126007 14 62555642 to 62555699 57 + TSS region transcription start site region 126007
Fam124a 14 62555737 to 62608486 52749 + protein coding gene family with sequence similarity 124, member A
Tssr126008 14 62555738 to 62555812 74 + TSS region transcription start site region 126008
Cpgi6594 14 62587146 to 62587889 743 CpG island CpG island 6594
Gm23816 14 62634962 to 62635093 131 - snoRNA gene predicted gene, 23816
Tssr4447 14 62654265 to 62654267 2 + TSS region transcription start site region 4447
Tssr126009 14 62663665 to 62663672 7 + TSS region transcription start site region 126009
Serpine3 14 62663667 to 62692243 28576 + protein coding gene serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3
Gm25162 14 62668612 to 62668770 158 + snoRNA gene predicted gene, 25162
Ints6 14 62676330 to 62761169 84839 - protein coding gene integrator complex subunit 6
Tssr129114 14 62700654 to 62700701 47 - TSS region transcription start site region 129114
Cpgi6595 14 62759535 to 62761884 2349 CpG island CpG island 6595
Tssr126010 14 62760464 to 62760484 20 + TSS region transcription start site region 126010
Tssr126011 14 62760485 to 62760493 8 + TSS region transcription start site region 126011
Tssr126012 14 62760496 to 62760521 25 + TSS region transcription start site region 126012
4931440J10Rik 14 62760501 to 62830126 69625 + lincRNA gene RIKEN cDNA 4931440J10 gene
Tssr129115 14 62760888 to 62760901 13 - TSS region transcription start site region 129115
Tssr4448 14 62761112 to 62761121 9 - TSS region transcription start site region 4448
Tssr129116 14 62761127 to 62761145 18 - TSS region transcription start site region 129116
Tssr126013 14 62761757 to 62761782 25 + TSS region transcription start site region 126013
Gm35678 14 62773250 to 62799664 26414 - lncRNA gene predicted gene, 35678
Gm18146 14 62779697 to 62780210 513 + pseudogene predicted gene, 18146
Gm47505 14 62818843 to 62819642 799 + pseudogene predicted gene, 47505
Gm26536 14 62836908 to 62838207 1299 - lincRNA gene predicted gene, 26536
Cpgi6596 14 62837116 to 62838318 1202 CpG island CpG island 6596
Tssr126014 14 62837679 to 62837726 47 + TSS region transcription start site region 126014
Wdfy2 14 62837690 to 62961509 123819 + protein coding gene WD repeat and FYVE domain containing 2
Mir8098 14 62837721 to 62837857 136 + miRNA gene microRNA 8098
Tssr126015 14 62837729 to 62837754 25 + TSS region transcription start site region 126015
Tssr126016 14 62837759 to 62837770 11 + TSS region transcription start site region 126016
Tssr129117 14 62838495 to 62838540 45 - TSS region transcription start site region 129117
Tssr126017 14 62838626 to 62838677 51 + TSS region transcription start site region 126017
Tssr126018 14 62857180 to 62857193 13 + TSS region transcription start site region 126018
Tssr126019 14 62857422 to 62857438 16 + TSS region transcription start site region 126019
Tssr126020 14 62857505 to 62857525 20 + TSS region transcription start site region 126020
Tssr126021 14 62857561 to 62857594 33 + TSS region transcription start site region 126021
Tssr126022 14 62858578 to 62858602 24 + TSS region transcription start site region 126022
Tssr126023 14 62862513 to 62862517 4 + TSS region transcription start site region 126023
Tssr126024 14 62865307 to 62865342 35 + TSS region transcription start site region 126024
Mir6541 14 62865542 to 62865651 109 + miRNA gene microRNA 6541
Tssr126025 14 62865638 to 62865664 26 + TSS region transcription start site region 126025
n-R5s47 14 62869714 to 62869832 118 + rRNA gene nuclear encoded rRNA 5S 47
Tssr126026 14 62882030 to 62882036 6 + TSS region transcription start site region 126026
Tssr126027 14 62886550 to 62886580 30 + TSS region transcription start site region 126027
Tssr126028 14 62887217 to 62887236 19 + TSS region transcription start site region 126028
Tssr126029 14 62887250 to 62887265 15 + TSS region transcription start site region 126029
Tssr126030 14 62894080 to 62894098 18 + TSS region transcription start site region 126030
Tssr126031 14 62906857 to 62906895 38 + TSS region transcription start site region 126031
Tssr126032 14 62917836 to 62917841 5 + TSS region transcription start site region 126032
Tssr126033 14 62926444 to 62926456 12 + TSS region transcription start site region 126033
Tssr126034 14 62935055 to 62935064 9 + TSS region transcription start site region 126034
Tssr126035 14 62960680 to 62960708 28 + TSS region transcription start site region 126035
Tssr129118 14 62966183 to 62966188 5 - TSS region transcription start site region 129118
Tssr129119 14 62966191 to 62966200 9 - TSS region transcription start site region 129119
Tssr129120 14 62966211 to 62966225 14 - TSS region transcription start site region 129120
Gm21021 14 62973790 to 62974975 1185 + pseudogene predicted gene, 21021
Defb48 14 62977524 to 62984510 6986 - protein coding gene defensin beta 48
Tssr129121 14 62984502 to 62984512 10 - TSS region transcription start site region 129121
Tssr126036 14 62992305 to 62992311 6 + TSS region transcription start site region 126036
Tssr126037 14 62992346 to 62992347 1 + TSS region transcription start site region 126037
Tssr126038 14 62992364 to 62992373 9 + TSS region transcription start site region 126038
Tssr126039 14 62992377 to 62992392 15 + TSS region transcription start site region 126039
Tssr126040 14 62992393 to 62992411 18 + TSS region transcription start site region 126040
Tssr126041 14 62992435 to 62992438 3 + TSS region transcription start site region 126041
Tssr126042 14 62992466 to 62992475 9 + TSS region transcription start site region 126042
Tssr126043 14 62998063 to 62998081 18 + TSS region transcription start site region 126043
Defb47 14 62998077 to 63001160 3083 + protein coding gene defensin beta 47
Tssr126044 14 63003387 to 63003396 9 + TSS region transcription start site region 126044
Tssr129122 14 63008719 to 63008727 8 - TSS region transcription start site region 129122
Tssr126045 14 63011649 to 63011656 7 + TSS region transcription start site region 126045
Tssr126046 14 63011682 to 63011692 10 + TSS region transcription start site region 126046
Tssr126047 14 63011694 to 63011699 5 + TSS region transcription start site region 126047
Tssr126048 14 63011729 to 63011740 11 + TSS region transcription start site region 126048
Tssr126049 14 63011750 to 63011763 13 + TSS region transcription start site region 126049
Tssr126050 14 63011765 to 63011775 10 + TSS region transcription start site region 126050
Defb43 14 63011771 to 63018088 6317 + protein coding gene defensin beta 43
Gm19198 14 63025130 to 63025711 581 - pseudogene predicted gene, 19198
Cpgi6597 14 63025454 to 63025842 388 CpG island CpG island 6597
Defb30 14 63034087 to 63037846 3759 - protein coding gene defensin beta 30
Tssr129123 14 63034826 to 63034833 7 - TSS region transcription start site region 129123
Tssr129124 14 63037841 to 63037871 30 - TSS region transcription start site region 129124
Tssr126051 14 63046842 to 63046851 9 + TSS region transcription start site region 126051
Tssr126052 14 63046943 to 63046958 15 + TSS region transcription start site region 126052
Tssr126053 14 63046965 to 63046984 19 + TSS region transcription start site region 126053