Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:61212481-63702694

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464 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sacs 14 61138457 to 61240695 102238 + protein coding gene sacsin
Sgcg 14 61219115 to 61258490 39375 - protein coding gene sarcoglycan, gamma (dystrophin-associated glycoprotein)
Tssr129053 14 61257990 to 61258014 24 - TSS region transcription start site region 129053
Tssr129054 14 61258383 to 61258465 82 - TSS region transcription start site region 129054
Tssr129055 14 61258484 to 61258493 9 - TSS region transcription start site region 129055
Gm17778 14 61272004 to 61276093 4089 + protein coding gene predicted gene, 17778
Cpgi6578 14 61274687 to 61275368 681 CpG island CpG island 6578
Gm19097 14 61283780 to 61284788 1008 - pseudogene predicted gene, 19097
Cpgi6579 14 61288676 to 61289210 534 CpG island CpG island 6579
1700109G14Rik 14 61292983 to 61305334 12351 - antisense lncRNA gene RIKEN cDNA 1700109G14 gene
Tssr129056 14 61305267 to 61305312 45 - TSS region transcription start site region 129056
Tssr129057 14 61305317 to 61305340 23 - TSS region transcription start site region 129057
Tssr129058 14 61305358 to 61305370 12 - TSS region transcription start site region 129058
Tssr125974 14 61305405 to 61305417 12 + TSS region transcription start site region 125974
Arl11 14 61309753 to 61311936 2183 + protein coding gene ADP-ribosylation factor-like 11
Tssr125975 14 61309806 to 61309813 7 + TSS region transcription start site region 125975
Tssr125976 14 61309819 to 61309855 36 + TSS region transcription start site region 125976
Tssr125977 14 61309860 to 61309871 11 + TSS region transcription start site region 125977
Gm5461 14 61324852 to 61325810 958 - pseudogene predicted gene 5461
Tssr129059 14 61325893 to 61325894 1 - TSS region transcription start site region 129059
Ebpl 14 61339763 to 61360445 20682 - protein coding gene emopamil binding protein-like
Gm25716 14 61342964 to 61343067 103 - snRNA gene predicted gene, 25716
Cpgi6580 14 61360098 to 61360542 444 CpG island CpG island 6580
Tssr129060 14 61360304 to 61360319 15 - TSS region transcription start site region 129060
Tssr129061 14 61360334 to 61360351 17 - TSS region transcription start site region 129061
Tssr129062 14 61360374 to 61360385 11 - TSS region transcription start site region 129062
Tssr129063 14 61360395 to 61360462 67 - TSS region transcription start site region 129063
Kpna3 14 61365211 to 61439874 74663 - protein coding gene karyopherin (importin) alpha 3
Tssr129064 14 61365513 to 61365532 19 - TSS region transcription start site region 129064
Tssr129065 14 61366620 to 61366642 22 - TSS region transcription start site region 129065
Tssr129066 14 61366669 to 61366684 15 - TSS region transcription start site region 129066
Tssr129067 14 61370443 to 61370480 37 - TSS region transcription start site region 129067
Tssr129068 14 61370514 to 61370531 17 - TSS region transcription start site region 129068
Tssr129069 14 61370732 to 61370754 22 - TSS region transcription start site region 129069
Tssr129070 14 61370757 to 61370772 15 - TSS region transcription start site region 129070
Tssr129071 14 61370895 to 61370925 30 - TSS region transcription start site region 129071
Tssr129072 14 61374322 to 61374340 18 - TSS region transcription start site region 129072
Tssr125978 14 61380312 to 61380313 1 + TSS region transcription start site region 125978
Tssr129073 14 61411066 to 61411104 38 - TSS region transcription start site region 129073
Tssr129074 14 61419701 to 61419707 6 - TSS region transcription start site region 129074
Tssr129075 14 61420837 to 61420840 3 - TSS region transcription start site region 129075
Tssr129076 14 61436799 to 61436810 11 - TSS region transcription start site region 129076
Tssr129077 14 61437048 to 61437054 6 - TSS region transcription start site region 129077
Tssr129078 14 61438331 to 61438334 3 - TSS region transcription start site region 129078
Cpgi6581 14 61439127 to 61440474 1347 CpG island CpG island 6581
Tssr129079 14 61439809 to 61439828 19 - TSS region transcription start site region 129079
Tssr129080 14 61439831 to 61439869 38 - TSS region transcription start site region 129080
Tssr129081 14 61440025 to 61440041 16 - TSS region transcription start site region 129081
Tssr129082 14 61440063 to 61440102 39 - TSS region transcription start site region 129082
2900024I21Rik 14 61448487 to 61450136 1649 unclassified gene RIKEN cDNA 2900024I21 gene
Gm49298 14 61459267 to 61459721 454 + pseudogene predicted gene, 49298
Rps12-ps2 14 61466968 to 61467366 398 - pseudogene ribosomal protein S12, pseudogene 2
Gm41169 14 61472841 to 61490398 17557 + lncRNA gene predicted gene, 41169
4930556J02Rik 14 61492688 to 61500382 7694 + lincRNA gene RIKEN cDNA 4930556J02 gene
Tssr125979 14 61492691 to 61492700 9 + TSS region transcription start site region 125979
Tssr125980 14 61492713 to 61492721 8 + TSS region transcription start site region 125980
Tssr125981 14 61492731 to 61492741 10 + TSS region transcription start site region 125981
Tssr125982 14 61519349 to 61519383 34 + TSS region transcription start site region 125982
Spryd7 14 61531993 to 61556886 24893 - protein coding gene SPRY domain containing 7
Vmn1r-ps136 14 61543727 to 61544108 381 + pseudogene vomeronasal 1 receptor, pseudogene 136
Cpgi6582 14 61556210 to 61557741 1531 CpG island CpG island 6582
Tssr129083 14 61556632 to 61556641 9 - TSS region transcription start site region 129083
Tssr129084 14 61556665 to 61556674 9 - TSS region transcription start site region 129084
Tssr129085 14 61556723 to 61556741 18 - TSS region transcription start site region 129085
Tssr129086 14 61556746 to 61556781 35 - TSS region transcription start site region 129086
Tssr129087 14 61556783 to 61556797 14 - TSS region transcription start site region 129087
Tssr129088 14 61556881 to 61556890 9 - TSS region transcription start site region 129088
Gm4118 14 61558798 to 61559442 644 + pseudogene predicted gene 4118
Tssr125983 14 61598226 to 61598241 15 + TSS region transcription start site region 125983
Tssr125984 14 61598242 to 61598252 10 + TSS region transcription start site region 125984
Del(14Trim13-Rnaseh2b)6Rdf 14 61598247 to 62372992 774745 chromosomal deletion deletion, Chr 14, Riccardo Dalla-Favera 6
Trim13 14 61598247 to 61605946 7699 + protein coding gene tripartite motif-containing 13
Del(14Trim13-Dleu2)4Rdf 14 61598247 to 61682373 84126 chromosomal deletion deletion, Chr 14, Riccardo Dalla-Favera 4
Del(14Trim13-Dleu2)3Rdf 14 61598247 to 61682373 84126 chromosomal deletion deletion, Chr 14, Riccardo Dalla-Favera 3
Tssr125985 14 61598264 to 61598286 22 + TSS region transcription start site region 125985
Tssr125986 14 61598300 to 61598310 10 + TSS region transcription start site region 125986
Cpgi6583 14 61599234 to 61599791 557 CpG island CpG island 6583
Tssr125987 14 61599493 to 61599548 55 + TSS region transcription start site region 125987
Tssr125988 14 61599550 to 61599569 19 + TSS region transcription start site region 125988
Tssr125989 14 61599570 to 61599584 14 + TSS region transcription start site region 125989
Dleu2 14 61602839 to 61682373 79534 - lncRNA gene deleted in lymphocytic leukemia, 2
Tssr125990 14 61607415 to 61607426 11 + TSS region transcription start site region 125990
Tssr125991 14 61607455 to 61607458 3 + TSS region transcription start site region 125991
Kcnrg 14 61607457 to 61612826 5369 + protein coding gene potassium channel regulator
Tssr129089 14 61609867 to 61609870 3 - TSS region transcription start site region 129089
Tssr129090 14 61614873 to 61614877 4 - TSS region transcription start site region 129090
Gm27010 14 61625926 to 61627337 1411 - lincRNA gene predicted gene, 27010
Tssr129091 14 61626922 to 61626923 1 - TSS region transcription start site region 129091
Gm27845 14 61629093 to 61629206 113 + unclassified non-coding RNA gene predicted gene, 27845
Gm26916 14 61629484 to 61630414 930 + lincRNA gene predicted gene, 26916
Mirc30 14 61631880 to 61632110 230 complex/cluster/region microRNA cluster 30, including Mir16-1 through Mir15a
Mir16-1 14 61631880 to 61631972 92 - miRNA gene microRNA 16-1
Tssr129092 14 61631888 to 61631893 5 - TSS region transcription start site region 129092
Mir15a 14 61632027 to 61632110 83 - miRNA gene microRNA 15a
Tssr129093 14 61633134 to 61633138 4 - TSS region transcription start site region 129093
Tssr129094 14 61636072 to 61636120 48 - TSS region transcription start site region 129094
Gm27747 14 61643371 to 61643455 84 + unclassified non-coding RNA gene predicted gene, 27747
Cpgi6584 14 61647509 to 61649446 1937 CpG island CpG island 6584
Tssr125992 14 61648360 to 61648365 5 + TSS region transcription start site region 125992
Tssr125993 14 61648414 to 61648430 16 + TSS region transcription start site region 125993
Tssr125994 14 61648435 to 61648445 10 + TSS region transcription start site region 125994
Tssr125995 14 61648456 to 61648465 9 + TSS region transcription start site region 125995
Gm27972 14 61648638 to 61648774 136 + unclassified non-coding RNA gene predicted gene, 27972
Tssr129095 14 61648762 to 61648807 45 - TSS region transcription start site region 129095
Tssr129096 14 61648811 to 61648814 3 - TSS region transcription start site region 129096
Gm27017 14 61648950 to 61667312 18362 + lincRNA gene predicted gene, 27017
Tssr129097 14 61656812 to 61656816 4 - TSS region transcription start site region 129097
Gm27928 14 61666387 to 61666642 255 + unclassified non-coding RNA gene predicted gene, 27928
Gm37420 14 61667220 to 61670131 2911 - unclassified gene predicted gene, 37420
Gm37472 14 61677443 to 61681494 4051 - unclassified gene predicted gene, 37472
Cpgi6585 14 61680839 to 61683314 2475 CpG island CpG island 6585
Tssr125996 14 61680963 to 61680995 32 + TSS region transcription start site region 125996
Tssr125997 14 61681543 to 61681569 26 + TSS region transcription start site region 125997
Tssr125998 14 61681977 to 61681986 9 + TSS region transcription start site region 125998
Tssr129098 14 61682310 to 61682335 25 - TSS region transcription start site region 129098
Tssr125999 14 61682575 to 61682610 35 + TSS region transcription start site region 125999
Gm37820 14 61683510 to 61685656 2146 + unclassified gene predicted gene, 37820
Tssr129099 14 61683847 to 61683891 44 - TSS region transcription start site region 129099
Cpgi6586 14 61686102 to 61687378 1276 CpG island CpG island 6586
Gm35196 14 61686786 to 61690598 3812 - lncRNA gene predicted gene, 35196
Cpgi6587 14 61689343 to 61690064 721 CpG island CpG island 6587
Tssr129100 14 61690888 to 61690894 6 - TSS region transcription start site region 129100
Gm46480 14 61707016 to 61708794 1778 + lncRNA gene predicted gene, 46480
Tssr4445 14 61768102 to 61768106 4 + TSS region transcription start site region 4445
Tssr4446 14 61805170 to 61805171 1 + TSS region transcription start site region 4446
Gm35247 14 61817815 to 61822477 4662 + lncRNA gene predicted gene, 35247
Gm41171 14 61845334 to 61846707 1373 - lncRNA gene predicted gene, 41171
Tssr126000 14 61861676 to 61861684 8 + TSS region transcription start site region 126000
Ebao3 14 61891444 to 61891444 0 QTL epidermolysis bullosa acquisita onset 3
Gm47952 14 61921376 to 61922063 687 + pseudogene predicted gene, 47952
Tssr126001 14 61959903 to 61959912 9 + TSS region transcription start site region 126001
Gm47953 14 62012319 to 62012633 314 + pseudogene predicted gene, 47953
Gm35307 14 62034867 to 62038927 4060 + lncRNA gene predicted gene, 35307
Gm35419 14 62120272 to 62171005 50733 - lincRNA gene predicted gene, 35419
Gm35361 14 62146811 to 62147539 728 + lncRNA gene predicted gene, 35361
Gm26969 14 62201915 to 62204352 2437 - lincRNA gene predicted gene, 26969
Dleu7 14 62276229 to 62292979 16750 - protein coding gene deleted in lymphocytic leukemia, 7
Cpgi6588 14 62292366 to 62293211 845 CpG island CpG island 6588
Tssr126002 14 62292475 to 62292496 21 + TSS region transcription start site region 126002
Tssr129101 14 62292959 to 62293019 60 - TSS region transcription start site region 129101
Tssr129102 14 62293177 to 62293213 36 - TSS region transcription start site region 129102
Tssr129103 14 62293228 to 62293240 12 - TSS region transcription start site region 129103
Gm41173 14 62327882 to 62332043 4161 - lncRNA gene predicted gene, 41173
Cpgi6589 14 62331710 to 62332589 879 CpG island CpG island 6589
Tssr126003 14 62332085 to 62332110 25 + TSS region transcription start site region 126003
Rnaseh2b 14 62332105 to 62372992 40887 + protein coding gene ribonuclease H2, subunit B
Tssr129104 14 62346993 to 62347004 11 - TSS region transcription start site region 129104
Tssr129105 14 62347027 to 62347030 3 - TSS region transcription start site region 129105
Gm46457 14 62379184 to 62392563 13379 + lncRNA gene predicted gene, 46457
D14Mit37 14 62383443 to 62383581 138 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 37
Gucy1b2 14 62392676 to 62456289 63613 - protein coding gene guanylate cyclase 1, soluble, beta 2
Tssr129106 14 62411813 to 62411817 4 - TSS region transcription start site region 129106
Tssr126004 14 62413556 to 62413567 11 + TSS region transcription start site region 126004
Tssr129107 14 62414279 to 62414327 48 - TSS region transcription start site region 129107
Tssr129108 14 62414493 to 62414507 14 - TSS region transcription start site region 129108
Gm35468 14 62440284 to 62446721 6437 + lncRNA gene predicted gene, 35468
Gm41172 14 62456467 to 62459180 2713 + lncRNA gene predicted gene, 41172
Cpgi6590 14 62457481 to 62457694 213 CpG island CpG island 6590
Gm4131 14 62462486 to 62481765 19279 - protein coding gene predicted gene 4131
Cpgi6591 14 62464829 to 62465003 174 CpG island CpG island 6591
Tssr129109 14 62465061 to 62465072 11 - TSS region transcription start site region 129109
Cpgi6592 14 62481021 to 62481320 299 CpG island CpG island 6592
Tssr129110 14 62481133 to 62481143 10 - TSS region transcription start site region 129110
Tssr129111 14 62497335 to 62497342 7 - TSS region transcription start site region 129111
Tssr126005 14 62497561 to 62497572 11 + TSS region transcription start site region 126005
Gm46482 14 62506860 to 62515217 8357 + lncRNA gene predicted gene, 46482
Gm6076 14 62514848 to 62515295 447 - pseudogene predicted gene 6076
Gm24625 14 62521023 to 62521152 129 + snoRNA gene predicted gene, 24625
Tssr129112 14 62531034 to 62531072 38 - TSS region transcription start site region 129112
Tssr129113 14 62531073 to 62531086 13 - TSS region transcription start site region 129113
Gm5802 14 62540493 to 62541193 700 - pseudogene predicted gene 5802
Gm35595 14 62541380 to 62541575 195 - protein coding gene predicted gene, 35595
Cpgi6593 14 62555332 to 62556383 1051 CpG island CpG island 6593
Tssr126006 14 62555620 to 62555633 13 + TSS region transcription start site region 126006
Tssr126007 14 62555642 to 62555699 57 + TSS region transcription start site region 126007
Fam124a 14 62555737 to 62608486 52749 + protein coding gene family with sequence similarity 124, member A
Tssr126008 14 62555738 to 62555812 74 + TSS region transcription start site region 126008
Cpgi6594 14 62587146 to 62587889 743 CpG island CpG island 6594
Gm23816 14 62634962 to 62635093 131 - snoRNA gene predicted gene, 23816
Tssr4447 14 62654265 to 62654267 2 + TSS region transcription start site region 4447
Tssr126009 14 62663665 to 62663672 7 + TSS region transcription start site region 126009
Serpine3 14 62663667 to 62692243 28576 + protein coding gene serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3
Gm25162 14 62668612 to 62668770 158 + snoRNA gene predicted gene, 25162
Ints6 14 62676330 to 62761169 84839 - protein coding gene integrator complex subunit 6
Tssr129114 14 62700654 to 62700701 47 - TSS region transcription start site region 129114
Cpgi6595 14 62759535 to 62761884 2349 CpG island CpG island 6595
Tssr126010 14 62760464 to 62760484 20 + TSS region transcription start site region 126010
Tssr126011 14 62760485 to 62760493 8 + TSS region transcription start site region 126011
Tssr126012 14 62760496 to 62760521 25 + TSS region transcription start site region 126012
4931440J10Rik 14 62760501 to 62830126 69625 + lincRNA gene RIKEN cDNA 4931440J10 gene
Tssr129115 14 62760888 to 62760901 13 - TSS region transcription start site region 129115
Tssr4448 14 62761112 to 62761121 9 - TSS region transcription start site region 4448
Tssr129116 14 62761127 to 62761145 18 - TSS region transcription start site region 129116
Tssr126013 14 62761757 to 62761782 25 + TSS region transcription start site region 126013
Gm35678 14 62773250 to 62799664 26414 - lncRNA gene predicted gene, 35678
Gm18146 14 62779697 to 62780210 513 + pseudogene predicted gene, 18146
Gm47505 14 62818843 to 62819642 799 + pseudogene predicted gene, 47505
Gm26536 14 62836908 to 62838207 1299 - lincRNA gene predicted gene, 26536
Cpgi6596 14 62837116 to 62838318 1202 CpG island CpG island 6596
Tssr126014 14 62837679 to 62837726 47 + TSS region transcription start site region 126014