Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:61210514-61530531

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58 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sacs 14 61138457 to 61240695 102238 + protein coding gene sacsin
Sgcg 14 61219115 to 61258490 39375 - protein coding gene sarcoglycan, gamma (dystrophin-associated glycoprotein)
Tssr129053 14 61257990 to 61258014 24 - TSS region transcription start site region 129053
Tssr129054 14 61258383 to 61258465 82 - TSS region transcription start site region 129054
Tssr129055 14 61258484 to 61258493 9 - TSS region transcription start site region 129055
Gm17778 14 61272004 to 61276093 4089 + protein coding gene predicted gene, 17778
Cpgi6578 14 61274687 to 61275368 681 CpG island CpG island 6578
Gm19097 14 61283780 to 61284788 1008 - pseudogene predicted gene, 19097
Cpgi6579 14 61288676 to 61289210 534 CpG island CpG island 6579
1700109G14Rik 14 61292983 to 61305334 12351 - antisense lncRNA gene RIKEN cDNA 1700109G14 gene
Tssr129056 14 61305267 to 61305312 45 - TSS region transcription start site region 129056
Tssr129057 14 61305317 to 61305340 23 - TSS region transcription start site region 129057
Tssr129058 14 61305358 to 61305370 12 - TSS region transcription start site region 129058
Tssr125974 14 61305405 to 61305417 12 + TSS region transcription start site region 125974
Arl11 14 61309753 to 61311936 2183 + protein coding gene ADP-ribosylation factor-like 11
Tssr125975 14 61309806 to 61309813 7 + TSS region transcription start site region 125975
Tssr125976 14 61309819 to 61309855 36 + TSS region transcription start site region 125976
Tssr125977 14 61309860 to 61309871 11 + TSS region transcription start site region 125977
Gm5461 14 61324852 to 61325810 958 - pseudogene predicted gene 5461
Tssr129059 14 61325893 to 61325894 1 - TSS region transcription start site region 129059
Ebpl 14 61339763 to 61360445 20682 - protein coding gene emopamil binding protein-like
Gm25716 14 61342964 to 61343067 103 - snRNA gene predicted gene, 25716
Cpgi6580 14 61360098 to 61360542 444 CpG island CpG island 6580
Tssr129060 14 61360304 to 61360319 15 - TSS region transcription start site region 129060
Tssr129061 14 61360334 to 61360351 17 - TSS region transcription start site region 129061
Tssr129062 14 61360374 to 61360385 11 - TSS region transcription start site region 129062
Tssr129063 14 61360395 to 61360462 67 - TSS region transcription start site region 129063
Kpna3 14 61365211 to 61439874 74663 - protein coding gene karyopherin (importin) alpha 3
Tssr129064 14 61365513 to 61365532 19 - TSS region transcription start site region 129064
Tssr129065 14 61366620 to 61366642 22 - TSS region transcription start site region 129065
Tssr129066 14 61366669 to 61366684 15 - TSS region transcription start site region 129066
Tssr129067 14 61370443 to 61370480 37 - TSS region transcription start site region 129067
Tssr129068 14 61370514 to 61370531 17 - TSS region transcription start site region 129068
Tssr129069 14 61370732 to 61370754 22 - TSS region transcription start site region 129069
Tssr129070 14 61370757 to 61370772 15 - TSS region transcription start site region 129070
Tssr129071 14 61370895 to 61370925 30 - TSS region transcription start site region 129071
Tssr129072 14 61374322 to 61374340 18 - TSS region transcription start site region 129072
Tssr125978 14 61380312 to 61380313 1 + TSS region transcription start site region 125978
Tssr129073 14 61411066 to 61411104 38 - TSS region transcription start site region 129073
Tssr129074 14 61419701 to 61419707 6 - TSS region transcription start site region 129074
Tssr129075 14 61420837 to 61420840 3 - TSS region transcription start site region 129075
Tssr129076 14 61436799 to 61436810 11 - TSS region transcription start site region 129076
Tssr129077 14 61437048 to 61437054 6 - TSS region transcription start site region 129077
Tssr129078 14 61438331 to 61438334 3 - TSS region transcription start site region 129078
Cpgi6581 14 61439127 to 61440474 1347 CpG island CpG island 6581
Tssr129079 14 61439809 to 61439828 19 - TSS region transcription start site region 129079
Tssr129080 14 61439831 to 61439869 38 - TSS region transcription start site region 129080
Tssr129081 14 61440025 to 61440041 16 - TSS region transcription start site region 129081
Tssr129082 14 61440063 to 61440102 39 - TSS region transcription start site region 129082
2900024I21Rik 14 61448487 to 61450136 1649 unclassified gene RIKEN cDNA 2900024I21 gene
Gm49298 14 61459267 to 61459721 454 + pseudogene predicted gene, 49298
Rps12-ps2 14 61466968 to 61467366 398 - pseudogene ribosomal protein S12, pseudogene 2
Gm41169 14 61472841 to 61490398 17557 + lncRNA gene predicted gene, 41169
4930556J02Rik 14 61492688 to 61500382 7694 + lincRNA gene RIKEN cDNA 4930556J02 gene
Tssr125979 14 61492691 to 61492700 9 + TSS region transcription start site region 125979
Tssr125980 14 61492713 to 61492721 8 + TSS region transcription start site region 125980
Tssr125981 14 61492731 to 61492741 10 + TSS region transcription start site region 125981
Tssr125982 14 61519349 to 61519383 34 + TSS region transcription start site region 125982