Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:59439821-60159969

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72 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hcbip1 14 47097793 to 59725144 12627351 QTL hexachlorobenzene induced porphyria 1
Gm45935 14 59380833 to 59440880 60047 - protein coding gene predicted gene, 45935
Setdb2 14 59402009 to 59440880 38871 - protein coding gene SET domain, bifurcated 2
Tssr125903 14 59440572 to 59440582 10 + TSS region transcription start site region 125903
Cpgi6560 14 59440572 to 59441331 759 CpG island CpG island 6560
Tssr129008 14 59440779 to 59440887 108 - TSS region transcription start site region 129008
Tssr125904 14 59440947 to 59440996 49 + TSS region transcription start site region 125904
Cab39l 14 59440955 to 59548903 107948 + protein coding gene calcium binding protein 39-like
Tssr129009 14 59441088 to 59441097 9 - TSS region transcription start site region 129009
Tssr129010 14 59441103 to 59441108 5 - TSS region transcription start site region 129010
Tssr129011 14 59441302 to 59441307 5 - TSS region transcription start site region 129011
Tssr129012 14 59441309 to 59441310 1 - TSS region transcription start site region 129012
Tssr129013 14 59441311 to 59441317 6 - TSS region transcription start site region 129013
Tssr125905 14 59478835 to 59478852 17 + TSS region transcription start site region 125905
Tssr125906 14 59478864 to 59478923 59 + TSS region transcription start site region 125906
Tssr125907 14 59478932 to 59478991 59 + TSS region transcription start site region 125907
Tssr125908 14 59479014 to 59479032 18 + TSS region transcription start site region 125908
Tssr125909 14 59491248 to 59491263 15 + TSS region transcription start site region 125909
Tssr125910 14 59501886 to 59501903 17 + TSS region transcription start site region 125910
Tssr125911 14 59526731 to 59526752 21 + TSS region transcription start site region 125911
Tssr129014 14 59552521 to 59552530 9 - TSS region transcription start site region 129014
Tssr129015 14 59557072 to 59557079 7 - TSS region transcription start site region 129015
Tssr125912 14 59557445 to 59557470 25 + TSS region transcription start site region 125912
Cdadc1 14 59559388 to 59597959 38571 - protein coding gene cytidine and dCMP deaminase domain containing 1
Gm18835 14 59570747 to 59571614 867 - pseudogene predicted gene, 18835
Tssr129016 14 59571993 to 59572000 7 - TSS region transcription start site region 129016
Cpgi6561 14 59597358 to 59598418 1060 CpG island CpG island 6561
Tssr129017 14 59597898 to 59597904 6 - TSS region transcription start site region 129017
Tssr129018 14 59597915 to 59597961 46 - TSS region transcription start site region 129018
Tssr129019 14 59597964 to 59597973 9 - TSS region transcription start site region 129019
Tssr125913 14 59598042 to 59598053 11 + TSS region transcription start site region 125913
Gm18073 14 59622123 to 59622670 547 - pseudogene predicted gene, 18073
Cpgi6562 14 59624964 to 59626850 1886 CpG island CpG island 6562
Tssr125914 14 59625278 to 59625291 13 + TSS region transcription start site region 125914
Tssr125915 14 59625302 to 59625318 16 + TSS region transcription start site region 125915
Shisa2 14 59625308 to 59631660 6352 + protein coding gene shisa family member 2
Tssr125916 14 59625560 to 59625586 26 + TSS region transcription start site region 125916
Tssr125917 14 59626309 to 59626320 11 + TSS region transcription start site region 125917
Tssr129020 14 59629400 to 59629437 37 - TSS region transcription start site region 129020
Cpgi6563 14 59629456 to 59630311 855 CpG island CpG island 6563
BC059841 14 59640438 to 59643412 2974 unclassified gene cDNA sequence BC059841
Gm19716 14 59642548 to 59644384 1836 + pseudogene predicted gene, 19716
Tssr129021 14 59643538 to 59643541 3 - TSS region transcription start site region 129021
Spmo3 14 59643959 to 59644083 124 QTL sperm mobility 3
D14Mit234 14 59643959 to 59644083 124 DNA segment DNA Segment, Chr 14, Massachusetts Institute of Technology 234
Atp8a2 14 59647320 to 60177987 530667 - protein coding gene ATPase, aminophospholipid transporter-like, class I, type 8A, member 2
Tssr129022 14 59677542 to 59677586 44 - TSS region transcription start site region 129022
Skull21 14 59724967 to 59725144 177 QTL skull morphology 21
Bglq15 14 59724967 to 59725144 177 QTL body growth late QTL 15
D14Mit5 14 59724967 to 59725144 177 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 5
D14Mit113 14 59799821 to 59799969 148 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 113
Mors3 14 59799821 to 59799969 148 QTL modifier of obesity related sterility 3
Nilac8 14 59828398 to 59828596 198 QTL nicotine induced locomotor activity 8
D14Mit155 14 59828398 to 59828596 198 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 155
Bbaa21 14 59828398 to 59828596 198 QTL B.burgdorferi-associated arthritis 21
Tssr129023 14 60027056 to 60027061 5 - TSS region transcription start site region 129023
Gm9013 14 60039610 to 60040491 881 - pseudogene predicted gene 9013
D14Mit65 14 60075071 to 60075202 131 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 65
Cpgi6564 14 60086528 to 60086939 411 CpG island CpG island 6564
Tssr129024 14 60086832 to 60086890 58 - TSS region transcription start site region 129024
Tssr129025 14 60086892 to 60086912 20 - TSS region transcription start site region 129025
4930563I02Rik 14 60087071 to 60096093 9022 + antisense lncRNA gene RIKEN cDNA 4930563I02 gene
Tssr129026 14 60087347 to 60087353 6 - TSS region transcription start site region 129026
Tssr129027 14 60087362 to 60087382 20 - TSS region transcription start site region 129027
Tssr129028 14 60087397 to 60087404 7 - TSS region transcription start site region 129028
Tssr125918 14 60087502 to 60087514 12 + TSS region transcription start site region 125918
Tssr125919 14 60087529 to 60087546 17 + TSS region transcription start site region 125919
D14Mit274 14 60093716 to 60093836 120 DNA segment DNA Segment, Chr 14, Massachusetts Institute of Technology-274
Tssr129029 14 60121717 to 60121749 32 - TSS region transcription start site region 129029
Tssr129030 14 60121757 to 60121764 7 - TSS region transcription start site region 129030
Gm6913 14 60141063 to 60141410 347 + pseudogene predicted gene 6913
Gm16261 14 60154151 to 60154355 204 + pseudogene predicted gene 16261