Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:58744136-59427118

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47 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
n-TTagt2 14 58818153 to 58818226 73 - tRNA gene nuclear encoded tRNA threonine 2 (anticodon AGT)
Gm9022 14 58879031 to 58880245 1214 - pseudogene predicted gene 9022
Cpgi6557 14 58893459 to 58893664 205 CpG island CpG island 6557
Tssr125896 14 58893465 to 58893469 4 + TSS region transcription start site region 125896
Rpl13-ps3 14 58893506 to 58894129 623 + pseudogene ribosomal protein L13, pseudogene 3
Gm48447 14 58912104 to 58939867 27763 + lincRNA gene predicted gene, 48447
Gm33472 14 59043940 to 59045944 2004 - lincRNA gene predicted gene, 33472
Gm41162 14 59046121 to 59067224 21103 + lincRNA gene predicted gene, 41162
Cpgi6558 14 59076250 to 59076503 253 CpG island CpG island 6558
Gm48453 14 59084136 to 59087118 2982 - lincRNA gene predicted gene, 48453
1700129C05Rik 14 59133040 to 59142893 9853 - protein coding gene RIKEN cDNA 1700129C05 gene
Tssr128990 14 59142886 to 59142898 12 - TSS region transcription start site region 128990
Gm5142 14 59158503 to 59178749 20246 - protein coding gene predicted gene 5142
Tssr128991 14 59178756 to 59178773 17 - TSS region transcription start site region 128991
Tssr128992 14 59178776 to 59178781 5 - TSS region transcription start site region 128992
Tssr125897 14 59178884 to 59178892 8 + TSS region transcription start site region 125897
Cpgi6559 14 59200704 to 59201837 1133 CpG island CpG island 6559
Tssr125898 14 59201031 to 59201053 22 + TSS region transcription start site region 125898
Rcbtb1 14 59201209 to 59237265 36056 + protein coding gene regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1
Tssr125899 14 59201227 to 59201267 40 + TSS region transcription start site region 125899
Tssr125900 14 59201274 to 59201313 39 + TSS region transcription start site region 125900
Tssr125901 14 59201418 to 59201495 77 + TSS region transcription start site region 125901
Tssr125902 14 59201965 to 59201968 3 + TSS region transcription start site region 125902
Phf11-ps 14 59244441 to 59260216 15775 - pseudogene PHD finger protein 11, pseudogene
Tssr128993 14 59260185 to 59260191 6 - TSS region transcription start site region 128993
Tssr128994 14 59260203 to 59260228 25 - TSS region transcription start site region 128994
Phf11a 14 59276913 to 59297522 20609 - protein coding gene PHD finger protein 11A
Tssr128995 14 59297510 to 59297529 19 - TSS region transcription start site region 128995
Phf11b 14 59320964 to 59341351 20387 - protein coding gene PHD finger protein 11B
Tssr128996 14 59323197 to 59323233 36 - TSS region transcription start site region 128996
Tssr128997 14 59324151 to 59324172 21 - TSS region transcription start site region 128997
Tssr128998 14 59341325 to 59341358 33 - TSS region transcription start site region 128998
Phf11d 14 59347407 to 59365470 18063 - protein coding gene PHD finger protein 11D
Tssr128999 14 59365420 to 59365431 11 - TSS region transcription start site region 128999
Tssr129000 14 59365434 to 59365461 27 - TSS region transcription start site region 129000
Tssr129001 14 59365465 to 59365487 22 - TSS region transcription start site region 129001
Tssr129002 14 59370540 to 59370555 15 - TSS region transcription start site region 129002
Tssr129003 14 59377622 to 59377626 4 - TSS region transcription start site region 129003
Gm45935 14 59380833 to 59440880 60047 - protein coding gene predicted gene, 45935
Phf11c 14 59380833 to 59393512 12679 - protein coding gene PHD finger protein 11C
Tssr129004 14 59397174 to 59397216 42 - TSS region transcription start site region 129004
Setdb2 14 59402009 to 59440880 38871 - protein coding gene SET domain, bifurcated 2
Tssr129005 14 59407757 to 59407762 5 - TSS region transcription start site region 129005
Tssr129006 14 59412155 to 59412174 19 - TSS region transcription start site region 129006
Gm16301 14 59414270 to 59414564 294 - pseudogene predicted gene 16301
Tssr129007 14 59419069 to 59419099 30 - TSS region transcription start site region 129007
Tssr4441 14 59419197 to 59419208 11 - TSS region transcription start site region 4441