Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:58030268-59270400

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47 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi6552 14 58034000 to 58034248 248 CpG island CpG island 6552
Tssr125890 14 58036606 to 58036617 11 + TSS region transcription start site region 125890
Tssr125891 14 58036664 to 58036669 5 + TSS region transcription start site region 125891
Tssr125892 14 58036678 to 58036693 15 + TSS region transcription start site region 125892
Gm9012 14 58049229 to 58049823 594 - pseudogene predicted gene 9012
Cpgi6553 14 58070608 to 58072669 2061 CpG island CpG island 6553
Tssr125893 14 58072215 to 58072229 14 + TSS region transcription start site region 125893
Tssr125894 14 58072280 to 58072305 25 + TSS region transcription start site region 125894
Fgf9 14 58072686 to 58112854 40168 + protein coding gene fibroblast growth factor 9
Cpgi6554 14 58073007 to 58073417 410 CpG island CpG island 6554
Cpgi6555 14 58073923 to 58074323 400 CpG island CpG island 6555
Cpgi6556 14 58074674 to 58076884 2210 CpG island CpG island 6556
Tssr125895 14 58085613 to 58085617 4 + TSS region transcription start site region 125895
Gm17109 14 58105772 to 58106129 357 - pseudogene predicted gene 17109
Tssr128989 14 58183216 to 58183222 6 - TSS region transcription start site region 128989
D14Mit1005 14 58213865 to 58214109 244 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 1005
Gm18080 14 58240221 to 58240834 613 + pseudogene predicted gene, 18080
Gm33321 14 58300802 to 58303365 2563 + lincRNA gene predicted gene, 33321
D14Mit215 14 58367064 to 58367186 122 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 215
Gm33430 14 58428853 to 58445140 16287 + lncRNA gene predicted gene, 33430
Gm25614 14 58650268 to 58650400 132 - snoRNA gene predicted gene, 25614
n-TTagt2 14 58818153 to 58818226 73 - tRNA gene nuclear encoded tRNA threonine 2 (anticodon AGT)
Gm9022 14 58879031 to 58880245 1214 - pseudogene predicted gene 9022
Cpgi6557 14 58893459 to 58893664 205 CpG island CpG island 6557
Tssr125896 14 58893465 to 58893469 4 + TSS region transcription start site region 125896
Rpl13-ps3 14 58893506 to 58894129 623 + pseudogene ribosomal protein L13, pseudogene 3
Gm48447 14 58912104 to 58939867 27763 + lincRNA gene predicted gene, 48447
Gm33472 14 59043940 to 59045944 2004 - lincRNA gene predicted gene, 33472
Gm41162 14 59046121 to 59067224 21103 + lincRNA gene predicted gene, 41162
Cpgi6558 14 59076250 to 59076503 253 CpG island CpG island 6558
Gm48453 14 59084136 to 59087118 2982 - lincRNA gene predicted gene, 48453
1700129C05Rik 14 59133040 to 59142893 9853 - protein coding gene RIKEN cDNA 1700129C05 gene
Tssr128990 14 59142886 to 59142898 12 - TSS region transcription start site region 128990
Gm5142 14 59158503 to 59178749 20246 - protein coding gene predicted gene 5142
Tssr128991 14 59178756 to 59178773 17 - TSS region transcription start site region 128991
Tssr128992 14 59178776 to 59178781 5 - TSS region transcription start site region 128992
Tssr125897 14 59178884 to 59178892 8 + TSS region transcription start site region 125897
Cpgi6559 14 59200704 to 59201837 1133 CpG island CpG island 6559
Tssr125898 14 59201031 to 59201053 22 + TSS region transcription start site region 125898
Rcbtb1 14 59201209 to 59237265 36056 + protein coding gene regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1
Tssr125899 14 59201227 to 59201267 40 + TSS region transcription start site region 125899
Tssr125900 14 59201274 to 59201313 39 + TSS region transcription start site region 125900
Tssr125901 14 59201418 to 59201495 77 + TSS region transcription start site region 125901
Tssr125902 14 59201965 to 59201968 3 + TSS region transcription start site region 125902
Phf11-ps 14 59244441 to 59260216 15775 - pseudogene PHD finger protein 11, pseudogene
Tssr128993 14 59260185 to 59260191 6 - TSS region transcription start site region 128993
Tssr128994 14 59260203 to 59260228 25 - TSS region transcription start site region 128994