Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:5797949-10207979

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266 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm3383 14 5781736 to 5814640 32904 - protein coding gene predicted gene 3383
Gm3424 14 5822252 to 5830322 8070 - protein coding gene predicted gene 3424
Gm17158 14 5849357 to 5849849 492 + pseudogene predicted gene 17158
Gm8237 14 5857918 to 5880382 22464 - protein coding gene predicted gene 8237
Gm17046 14 5877078 to 5877924 846 + pseudogene predicted gene 17046
Gm3242 14 5893193 to 5899001 5808 - pseudogene predicted gene 3242
Gm17047 14 5930665 to 5931094 429 + pseudogene predicted gene 17047
Gm3248 14 5939225 to 5961745 22520 - protein coding gene predicted gene 3248
Gm17048 14 5958446 to 5959292 846 + pseudogene predicted gene 17048
Cpgi6147 14 5961208 to 5961475 267 CpG island CpG island 6147
Gm3453 14 5970744 to 5979137 8393 - protein coding gene predicted gene 3453
Gm3261 14 6008825 to 6009305 480 + pseudogene predicted gene 3261
Gm8206 14 6016759 to 6093942 77183 - protein coding gene predicted gene 8206
Gm17045 14 6034967 to 6035810 843 + pseudogene predicted gene 17045
Gm6337 14 6055146 to 6058204 3058 - protein coding gene predicted gene 6337
Gm3275 14 6078696 to 6079182 486 + pseudogene predicted gene 3275
Gm3468 14 6088352 to 6097373 9021 - protein coding gene predicted gene 3468
Gm3476 14 6117606 to 6125827 8221 - protein coding gene predicted gene 3476
Gm26991 14 6154126 to 6160087 5961 - pseudogene predicted gene, 26991
Gm3208 14 6202334 to 6202760 426 + pseudogene predicted gene 3208
Gm21560 14 6211941 to 6219210 7269 - protein coding gene predicted gene, 21560
Gm41093 14 6223097 to 6233278 10181 - lncRNA gene predicted gene, 41093
Gm21772 14 6251403 to 6251880 477 + pseudogene predicted gene, 21772
Gm3411 14 6259747 to 6287250 27503 - protein coding gene predicted gene 3411
Tssr127379 14 6287326 to 6287344 18 - TSS region transcription start site region 127379
Gm21103 14 6296365 to 6304843 8478 - protein coding gene predicted gene, 21103
Gm3618 14 6314876 to 6343678 28802 - protein coding gene predicted gene 3618
Gm26630 14 6352044 to 6446960 94916 + unclassified non-coding RNA gene predicted gene, 26630
Gm8340 14 6358497 to 6359687 1190 + pseudogene predicted gene 8340
Gm18573 14 6376875 to 6378009 1134 + pseudogene predicted gene, 18573
Gm16440 14 6381108 to 6390314 9206 - protein coding gene predicted gene 16440
Gm3591 14 6405827 to 6412482 6655 - protein coding gene predicted gene 3591
Gm3594 14 6441472 to 6444548 3076 - protein coding gene predicted gene 3594
Gm8356 14 6528612 to 6537290 8678 - protein coding gene predicted gene 8356
Gm3629 14 6583959 to 6590613 6654 - protein coding gene predicted gene 3629
Gm33933 14 6585064 to 6604976 19912 - protein coding gene predicted gene, 33933
Gm3460 14 6613967 to 6622418 8451 - protein coding gene predicted gene 3460
Gm10251 14 6638420 to 6684170 45750 - protein coding gene predicted gene 10251
Gm33198 14 6641180 to 6680438 39258 + lncRNA gene predicted gene, 33198
Gm46468 14 6666131 to 6671364 5233 + lncRNA gene predicted gene, 46468
Gm26680 14 6684255 to 6783942 99687 + unclassified non-coding RNA gene predicted gene, 26680
Gm3466 14 6690690 to 6691881 1191 + pseudogene predicted gene 3466
Gm18574 14 6709066 to 6710200 1134 + pseudogene predicted gene, 18574
Gm8050 14 6712977 to 6720171 7194 - protein coding gene predicted gene 8050
Gm3636 14 6735685 to 6742332 6647 - protein coding gene predicted gene 3636
Gm8362 14 6765962 to 6774411 8449 - protein coding gene predicted gene 8362
Gm3642 14 6834594 to 6840373 5779 - protein coding gene predicted gene 3642
Gm46469 14 6843357 to 6852599 9242 - lncRNA gene predicted gene, 46469
Gm32041 14 6848515 to 6994160 145645 + lncRNA gene predicted gene, 32041
Gm3667 14 6868502 to 6889962 21460 - protein coding gene predicted gene 3667
Tssr127380 14 6889920 to 6889959 39 - TSS region transcription start site region 127380
Gm47747 14 6956945 to 6957625 680 + pseudogene predicted gene, 47747
Gm6356 14 6965449 to 6973818 8369 - protein coding gene predicted gene 6356
Gm47749 14 6997191 to 6997782 591 + pseudogene predicted gene, 47749
Gm10406 14 7006115 to 7027449 21334 - protein coding gene predicted gene 10406
Cpgi6148 14 7027427 to 7027587 160 CpG island CpG island 6148
Gm3685 14 7037616 to 7044907 7291 - protein coding gene predicted gene 3685
Gm31035 14 7046923 to 7136576 89653 + protein coding gene predicted gene, 31035
Gm47764 14 7074598 to 7075170 572 + pseudogene predicted gene, 47764
Gm3696 14 7083208 to 7100621 17413 - protein coding gene predicted gene 3696
Gm6676 14 7118058 to 7125397 7339 - protein coding gene predicted gene 6676
Gm41092 14 7128389 to 7136530 8141 - lncRNA gene predicted gene, 41092
Gm3512 14 7153511 to 7174533 21022 - protein coding gene predicted gene 3512
Gm16434 14 7187187 to 7194525 7338 - protein coding gene predicted gene 16434
Gm41091 14 7197517 to 7205553 8036 - lncRNA gene predicted gene, 41091
Gm3715 14 7223692 to 7229138 5446 - pseudogene predicted gene 3715
Gm16525 14 7228330 to 7246160 17830 - unclassified gene predicted gene, 16525
Gm5456 14 7241442 to 7242285 843 + pseudogene predicted gene 5456
Gm3727 14 7256208 to 7264653 8445 - protein coding gene predicted gene 3727
Gm3739 14 7293648 to 7315049 21401 - protein coding gene predicted gene 3739
Cpgi6149 14 7315155 to 7315350 195 CpG island CpG island 6149
Gm5797 14 7323988 to 7332395 8407 - protein coding gene predicted gene 5797
Gm8374 14 7362097 to 7365134 3037 - protein coding gene predicted gene 8374
4930521O11Rik 14 7362101 to 7412447 50346 - unclassified gene RIKEN cDNA 4930521O11 gene
Gm10339 14 7374667 to 7412375 37708 - lincRNA gene predicted gene 10339
Gm41090 14 7377677 to 7399572 21895 + lncRNA gene predicted gene, 41090
4933406F09Rik 14 7412473 to 7422685 10212 + lincRNA gene RIKEN cDNA 4933406F09 gene
Gm8379 14 7418908 to 7420099 1191 + pseudogene predicted gene 8379
Gm18575 14 7437314 to 7438448 1134 + pseudogene predicted gene, 18575
Gm3755 14 7440924 to 7450917 9993 - protein coding gene predicted gene 3755
Gm3752 14 7467424 to 7477425 10001 - protein coding gene predicted gene 3752
Gm3760 14 7498713 to 7506148 7435 - pseudogene predicted gene 3760
Gm46467 14 7536187 to 7537066 879 - lncRNA gene predicted gene, 46467
Gm3558 14 7545151 to 7568566 23415 - protein coding gene predicted gene 3558
Gm17121 14 7565260 to 7566106 846 + pseudogene predicted gene 17121
Gm10338 14 7581699 to 7595529 13830 - protein coding gene predicted gene 10338
Gm47876 14 7627888 to 7628386 498 + pseudogene predicted gene, 47876
Gm10128 14 7640895 to 7643972 3077 - pseudogene predicted gene 10128
Gm38418 14 7643088 to 7658948 15860 - protein coding gene predicted gene, 38418
Gm16741 14 7749945 to 7775528 25583 + lincRNA gene predicted gene, 16741
Gm10044 14 7755325 to 7792342 37017 - unclassified non-coding RNA gene predicted gene 10044
Cpgi6150 14 7773930 to 7774201 271 CpG island CpG island 6150
Cpgi6151 14 7791347 to 7792090 743 CpG island CpG island 6151
Tssr124205 14 7791415 to 7791422 7 + TSS region transcription start site region 124205
Tssr124206 14 7791428 to 7791433 5 + TSS region transcription start site region 124206
Tssr124207 14 7791439 to 7791442 3 + TSS region transcription start site region 124207
Tssr124208 14 7791451 to 7791487 36 + TSS region transcription start site region 124208
Tssr124209 14 7791488 to 7791493 5 + TSS region transcription start site region 124209
Tssr124210 14 7791514 to 7791515 1 + TSS region transcription start site region 124210
Gm26661 14 7791587 to 7792057 470 + protein coding gene predicted gene, 26661
Tssr127381 14 7791768 to 7791778 10 - TSS region transcription start site region 127381
Cpgi6152 14 7801136 to 7801391 255 CpG island CpG island 6152
Tssr124211 14 7801141 to 7801145 4 + TSS region transcription start site region 124211
Gm8396 14 7801208 to 7802030 822 + pseudogene predicted gene 8396
Tssr127382 14 7808308 to 7808317 9 - TSS region transcription start site region 127382
Cpgi6153 14 7817713 to 7819061 1348 CpG island CpG island 6153
Flnb 14 7817957 to 7951588 133631 + protein coding gene filamin, beta
Tssr124212 14 7817974 to 7817994 20 + TSS region transcription start site region 124212
Tssr124213 14 7818004 to 7818018 14 + TSS region transcription start site region 124213
Tssr124214 14 7818055 to 7818064 9 + TSS region transcription start site region 124214
Tssr127383 14 7843107 to 7843120 13 - TSS region transcription start site region 127383
Tssr124215 14 7847896 to 7847930 34 + TSS region transcription start site region 124215
Tssr127384 14 7851535 to 7851564 29 - TSS region transcription start site region 127384
Tssr127385 14 7858509 to 7858540 31 - TSS region transcription start site region 127385
Tssr124216 14 7858610 to 7858656 46 + TSS region transcription start site region 124216
Tssr124217 14 7890615 to 7890624 9 + TSS region transcription start site region 124217
Tssr124218 14 7924235 to 7924246 11 + TSS region transcription start site region 124218
Tssr124219 14 7937286 to 7937297 11 + TSS region transcription start site region 124219
Tssr124220 14 7941648 to 7941659 11 + TSS region transcription start site region 124220
Tssr124221 14 7951192 to 7951222 30 + TSS region transcription start site region 124221
Gm45521 14 7957288 to 7960636 3348 + protein coding gene predicted gene 45521
Tssr124222 14 7957289 to 7957304 15 + TSS region transcription start site region 124222
Dnase1l3 14 7965187 to 7994765 29578 - protein coding gene deoxyribonuclease 1-like 3
Tssr127386 14 7967408 to 7967419 11 - TSS region transcription start site region 127386
Tssr127387 14 7967712 to 7967727 15 - TSS region transcription start site region 127387
Tssr127388 14 7994005 to 7994020 15 - TSS region transcription start site region 127388
Tssr127389 14 7994135 to 7994150 15 - TSS region transcription start site region 127389
Tssr127390 14 7994191 to 7994217 26 - TSS region transcription start site region 127390
Tssr127391 14 7994222 to 7994227 5 - TSS region transcription start site region 127391
Tssr127392 14 7994537 to 7994554 17 - TSS region transcription start site region 127392
Tssr127393 14 7994563 to 7994584 21 - TSS region transcription start site region 127393
Tssr127394 14 7994587 to 7994596 9 - TSS region transcription start site region 127394
Gm30244 14 7996943 to 8004255 7312 - lncRNA gene predicted gene, 30244
Cpgi6154 14 8002557 to 8003339 782 CpG island CpG island 6154
Tssr124223 14 8002890 to 8002946 56 + TSS region transcription start site region 124223
Abhd6 14 8002902 to 8056763 53861 + protein coding gene abhydrolase domain containing 6
Tssr124224 14 8002949 to 8002979 30 + TSS region transcription start site region 124224
Tssr127395 14 8004036 to 8004045 9 - TSS region transcription start site region 127395
Tssr127396 14 8004050 to 8004057 7 - TSS region transcription start site region 127396
Tssr124225 14 8006532 to 8006541 9 + TSS region transcription start site region 124225
Tssr124226 14 8006590 to 8006602 12 + TSS region transcription start site region 124226
Tssr124227 14 8016534 to 8016549 15 + TSS region transcription start site region 124227
Tssr124228 14 8016560 to 8016588 28 + TSS region transcription start site region 124228
Tssr124229 14 8016634 to 8016680 46 + TSS region transcription start site region 124229
Tssr124230 14 8049540 to 8049544 4 + TSS region transcription start site region 124230
Gm41094 14 8054018 to 8055505 1487 - lncRNA gene predicted gene, 41094
Tssr124231 14 8063241 to 8063261 20 + TSS region transcription start site region 124231
A230065C20Rik 14 8063259 to 8065244 1985 unclassified non-coding RNA gene RIKEN cDNA A230065C20 gene
Cpgi6155 14 8080138 to 8080956 818 CpG island CpG island 6155
Tssr124232 14 8080315 to 8080385 70 + TSS region transcription start site region 124232
Rpp14 14 8080367 to 8091834 11467 + protein coding gene ribonuclease P 14 subunit
Tssr124233 14 8080386 to 8080399 13 + TSS region transcription start site region 124233
Tssr124234 14 8095770 to 8095817 47 + TSS region transcription start site region 124234
Cpgi6156 14 8097884 to 8098798 914 CpG island CpG island 6156
Tssr124235 14 8098196 to 8098296 100 + TSS region transcription start site region 124235
Pxk 14 8098211 to 8165117 66906 + protein coding gene PX domain containing serine/threonine kinase
Tssr4245 14 8099599 to 8099614 15 - TSS region transcription start site region 4245
Tssr127397 14 8114396 to 8114436 40 - TSS region transcription start site region 127397
Tssr124236 14 8118160 to 8118171 11 + TSS region transcription start site region 124236
Tssr124237 14 8118172 to 8118187 15 + TSS region transcription start site region 124237
Tssr124238 14 8118213 to 8118220 7 + TSS region transcription start site region 124238
Tssr124239 14 8125243 to 8125245 2 + TSS region transcription start site region 124239
Gm18144 14 8125246 to 8125905 659 + pseudogene predicted gene, 18144
D14Mit110 14 8159438 to 8159575 137 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 110
Pdhb 14 8165991 to 8172992 7001 - protein coding gene pyruvate dehydrogenase (lipoamide) beta
Cpgi6157 14 8172448 to 8173438 990 CpG island CpG island 6157
Tssr127398 14 8172958 to 8172977 19 - TSS region transcription start site region 127398
Tssr127399 14 8172986 to 8173003 17 - TSS region transcription start site region 127399
Cpgi6158 14 8213645 to 8214861 1216 CpG island CpG island 6158
Tssr124240 14 8213997 to 8214039 42 + TSS region transcription start site region 124240
Tssr124241 14 8214135 to 8214181 46 + TSS region transcription start site region 124241
Kctd6 14 8214140 to 8223563 9423 + protein coding gene potassium channel tetramerisation domain containing 6
Tssr124242 14 8214199 to 8214209 10 + TSS region transcription start site region 124242
Acox2 14 8225511 to 8259019 33508 - protein coding gene acyl-Coenzyme A oxidase 2, branched chain
D14Mit276 14 8241582 to 8241700 118 DNA segment DNA Segment, Chr 14, Massachusetts Institute of Technology-276
D14Dcr14 14 8250914 to 8251015 101 DNA segment DNA Segment, Chr 14, Derry C. Roopenian 14
Tssr127400 14 8258037 to 8258062 25 - TSS region transcription start site region 127400
Tssr127401 14 8258068 to 8258098 30 - TSS region transcription start site region 127401
Tssr127402 14 8258800 to 8258813 13 - TSS region transcription start site region 127402
Tssr4246 14 8258835 to 8258840 5 - TSS region transcription start site region 4246
Tssr127403 14 8258881 to 8258903 22 - TSS region transcription start site region 127403
Tssr127404 14 8258910 to 8258954 44 - TSS region transcription start site region 127404
Tssr127405 14 8258961 to 8258977 16 - TSS region transcription start site region 127405
Tssr127406 14 8258979 to 8258991 12 - TSS region transcription start site region 127406
Tssr127407 14 8258996 to 8259001 5 - TSS region transcription start site region 127407
Tssr127408 14 8259007 to 8259024 17 - TSS region transcription start site region 127408
Tssr127409 14 8259262 to 8259283 21 - TSS region transcription start site region 127409
Tssr127410 14 8259291 to 8259313 22 - TSS region transcription start site region 127410
Tssr127411 14 8259325 to 8259378 53 - TSS region transcription start site region 127411
Fam107a 14 8296270 to 8318018 21748 - protein coding gene family with sequence similarity 107, member A
D14Mit146.2 14 8296926 to 8297088 162 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 146.2
D14Mit146 14 8297063 to 8297197 134 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 146
Tssr127412 14 8297110 to 8297136 26 - TSS region transcription start site region 127412
Tssr127413 14 8298095 to 8298105 10 - TSS region transcription start site region 127413
Tssr127414 14 8298366 to 8298375 9 - TSS region transcription start site region 127414
Tssr124243 14 8299572 to 8299582 10 + TSS region transcription start site region 124243
Tssr127415 14 8299629 to 8299665 36 - TSS region transcription start site region 127415
Tssr127416 14 8309678 to 8309725 47 - TSS region transcription start site region 127416
Tssr127417 14 8309734 to 8309745 11 - TSS region transcription start site region 127417
Tssr127418 14 8309770 to 8309784 14 - TSS region transcription start site region 127418