Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:57354734-57694804

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cryl1 14 57275034 to 57398483 123449 - protein coding gene crystallin, lambda 1
Gm8971 14 57363385 to 57363733 348 + pseudogene predicted gene 8971
Tssr128962 14 57376088 to 57376093 5 - TSS region transcription start site region 128962
Gm41161 14 57376456 to 57384049 7593 + lncRNA gene predicted gene, 41161
Tssr128963 14 57379367 to 57379419 52 - TSS region transcription start site region 128963
Gm29717 14 57384865 to 57385250 385 - pseudogene predicted gene, 29717
Cpgi6540 14 57398082 to 57398714 632 CpG island CpG island 6540
Tssr128964 14 57398486 to 57398509 23 - TSS region transcription start site region 128964
Tssr128965 14 57398513 to 57398530 17 - TSS region transcription start site region 128965
AU040096 14 57417270 to 57419481 2211 unclassified gene expressed sequence AU040096
Cpgi6541 14 57423743 to 57424469 726 CpG island CpG island 6541
Tssr125868 14 57424054 to 57424093 39 + TSS region transcription start site region 125868
Ift88 14 57424069 to 57517936 93867 + protein coding gene intraflagellar transport 88
Tssr125869 14 57424094 to 57424111 17 + TSS region transcription start site region 125869
Gm15836 14 57435721 to 57436513 792 - pseudogene predicted gene 15836
Ift88os 14 57506744 to 57510835 4091 - antisense lncRNA gene intraflagellar transport 88, opposite strand
AU020094 14 57523805 to 57524834 1029 unclassified gene expressed sequence AU020094
Cpgi6542 14 57524532 to 57526053 1521 CpG island CpG island 6542
Tssr125870 14 57524734 to 57524804 70 + TSS region transcription start site region 125870
Il17d 14 57524829 to 57543166 18337 + protein coding gene interleukin 17D
Tssr125871 14 57525052 to 57525105 53 + TSS region transcription start site region 125871
Tssr128966 14 57525456 to 57525467 11 - TSS region transcription start site region 128966
Tssr128967 14 57525499 to 57525525 26 - TSS region transcription start site region 128967
Tssr128968 14 57525569 to 57525645 76 - TSS region transcription start site region 128968
Tssr125872 14 57537487 to 57537494 7 + TSS region transcription start site region 125872
Cpgi6543 14 57542184 to 57542765 581 CpG island CpG island 6543
Eef1akmt1 14 57549596 to 57571569 21973 - protein coding gene EEF1A alpha lysine methyltransferase 1
Cpgi6544 14 57571365 to 57571768 403 CpG island CpG island 6544
Tssr128969 14 57571551 to 57571588 37 - TSS region transcription start site region 128969
Tssr125873 14 57571594 to 57571625 31 + TSS region transcription start site region 125873
1700039M10Rik 14 57571614 to 57572368 754 + bidirectional promoter lncRNA gene RIKEN cDNA 1700039M10 gene
Xpo4 14 57579755 to 57665512 85757 - protein coding gene exportin 4
Tssr128970 14 57598616 to 57598617 1 - TSS region transcription start site region 128970
Gm49361 14 57642077 to 57746103 104026 - protein coding gene predicted gene, 49361
Tssr128971 14 57662216 to 57662224 8 - TSS region transcription start site region 128971
Cpgi6545 14 57664298 to 57665686 1388 CpG island CpG island 6545
Tssr128972 14 57664926 to 57664934 8 - TSS region transcription start site region 128972
Tssr128973 14 57664954 to 57664995 41 - TSS region transcription start site region 128973
Tssr128974 14 57665192 to 57665260 68 - TSS region transcription start site region 128974
Lats2 14 57689662 to 57746123 56461 - protein coding gene large tumor suppressor 2