MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 14:56345533-56555552

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi6525	14	56364660 to 56365449	789		CpG island	CpG island 6525
Tssr125831	14	56364858 to 56364865	7	+	TSS region	transcription start site region 125831
Tssr125832	14	56365004 to 56365016	12	+	TSS region	transcription start site region 125832
Atp12a	14	56365068 to 56388550	23482	+	protein coding gene	ATPase, H+/K+ transporting, nongastric, alpha polypeptide
Tssr128927	14	56366821 to 56366835	14	-	TSS region	transcription start site region 128927
Gm10873	14	56376902 to 56391562	14660	-	antisense lncRNA gene	predicted gene 10873
Gm32454	14	56391651 to 56398828	7177	+	lncRNA gene	predicted gene, 32454
Cpgi6526	14	56402611 to 56402893	282		CpG island	CpG island 6526
Rnf17	14	56402634 to 56525032	122398	+	protein coding gene	ring finger protein 17
Tssr125833	14	56402656 to 56402700	44	+	TSS region	transcription start site region 125833
Tssr125834	14	56402705 to 56402712	7	+	TSS region	transcription start site region 125834
Gm18947	14	56410354 to 56411481	1127	-	pseudogene	predicted gene, 18947
Gm24392	14	56416766 to 56416868	102	+	snRNA gene	predicted gene, 24392
Tssr125835	14	56449819 to 56449821	2	+	TSS region	transcription start site region 125835
Tssr4439	14	56450533 to 56450552	19	+	TSS region	transcription start site region 4439
Cenpj	14	56526761 to 56575425	48664	-	protein coding gene	centromere protein J
Gm22431	14	56535971 to 56536077	106	+	unclassified non-coding RNA gene	predicted gene, 22431
Tssr128928	14	56552039 to 56552071	32	-	TSS region	transcription start site region 128928