Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:55826451-56059675

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51 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nfatc4 14 55824795 to 55833943 9148 + protein coding gene nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 4
Cpgi6519 14 55826381 to 55826981 600 CpG island CpG island 6519
Cpgi6520 14 55853906 to 55854453 547 CpG island CpG island 6520
Tssr125824 14 55853978 to 55853989 11 + TSS region transcription start site region 125824
Tssr125825 14 55853997 to 55854033 36 + TSS region transcription start site region 125825
Nynrin 14 55854115 to 55874736 20621 + protein coding gene NYN domain and retroviral integrase containing
Tssr125826 14 55854125 to 55854206 81 + TSS region transcription start site region 125826
Gm26751 14 55864311 to 55874735 10424 - lincRNA gene predicted gene, 26751
Tssr128892 14 55878357 to 55878359 2 - TSS region transcription start site region 128892
Cbln3 14 55878920 to 55884256 5336 - protein coding gene cerebellin 3 precursor protein
Tssr128893 14 55881978 to 55881994 16 - TSS region transcription start site region 128893
Tssr128894 14 55882050 to 55882051 1 - TSS region transcription start site region 128894
Tssr128895 14 55882067 to 55882081 14 - TSS region transcription start site region 128895
Tssr128896 14 55882193 to 55882196 3 - TSS region transcription start site region 128896
Tssr128897 14 55882669 to 55882714 45 - TSS region transcription start site region 128897
Tssr128898 14 55882748 to 55882763 15 - TSS region transcription start site region 128898
Tssr128899 14 55882774 to 55882784 10 - TSS region transcription start site region 128899
Tssr128900 14 55882870 to 55882902 32 - TSS region transcription start site region 128900
Tssr128901 14 55884197 to 55884216 19 - TSS region transcription start site region 128901
Tssr128902 14 55884223 to 55884237 14 - TSS region transcription start site region 128902
Tssr128903 14 55884250 to 55884255 5 - TSS region transcription start site region 128903
Tssr128904 14 55884279 to 55884311 32 - TSS region transcription start site region 128904
Tssr128905 14 55884367 to 55884376 9 - TSS region transcription start site region 128905
Cpgi6521 14 55884742 to 55885450 708 CpG island CpG island 6521
Khnyn 14 55884947 to 55898775 13828 + protein coding gene KH and NYN domain containing
Tssr125827 14 55884960 to 55885010 50 + TSS region transcription start site region 125827
Tssr4436 14 55885031 to 55885042 11 + TSS region transcription start site region 4436
Cpgi6522 14 55885669 to 55886070 401 CpG island CpG island 6522
Tssr128906 14 55885978 to 55885987 9 - TSS region transcription start site region 128906
Tssr128907 14 55885997 to 55886009 12 - TSS region transcription start site region 128907
Cpgi6523 14 55887282 to 55887806 524 CpG island CpG island 6523
Sdr39u1 14 55897283 to 55900281 2998 - protein coding gene short chain dehydrogenase/reductase family 39U, member 1
Cpgi6524 14 55899691 to 55900564 873 CpG island CpG island 6524
Tssr128908 14 55900188 to 55900235 47 - TSS region transcription start site region 128908
Tssr4437 14 55900240 to 55900260 20 - TSS region transcription start site region 4437
D14Sfk2 14 55909965 to 55910188 223 DNA segment DNA segment, Chr 14, Stephen F. Kingsmore 2
D14Sfk3 14 55909967 to 55910109 142 DNA segment DNA segment, Chr 14, Stephen F. Kingsmore 3
D14Sfk1 14 55910809 to 55911047 238 DNA segment DNA segment, Chr 14, Stephen F. Kingsmore 1
Gm48925 14 55935606 to 55937595 1989 - lincRNA gene predicted gene, 48925
Cma1 14 55941451 to 55944675 3224 - protein coding gene chymase 1, mast cell
Tssr128909 14 55944536 to 55944569 33 - TSS region transcription start site region 128909
Mcpt-ps1 14 55949809 to 55952350 2541 - pseudogene mast cell protease, pseudogene 1
Cma2 14 55950980 to 55974031 23051 + protein coding gene chymase 2, mast cell
Tssr4438 14 55951347 to 55951348 1 - TSS region transcription start site region 4438
Gm48927 14 55966725 to 55966865 140 - pseudogene predicted gene, 48927
Gm48934 14 55989063 to 55989685 622 + pseudogene predicted gene, 48934
Gm5801 14 56010536 to 56011315 779 - pseudogene predicted pseudogene 5801
Tssr125828 14 56017965 to 56017970 5 + TSS region transcription start site region 125828
Mcpt1 14 56017971 to 56020384 2413 + protein coding gene mast cell protease 1
Mcpt9 14 56026864 to 56030495 3631 - protein coding gene mast cell protease 9
Mcpt2 14 56042041 to 56044642 2601 + protein coding gene mast cell protease 2