Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:55754969-55895011

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75 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nop9 14 55745693 to 55755500 9807 + protein coding gene NOP9 nucleolar protein
Cideb 14 55754052 to 55758424 4372 - protein coding gene cell death-inducing DNA fragmentation factor, alpha subunit-like effector B
Tssr125811 14 55757830 to 55757856 26 + TSS region transcription start site region 125811
Tssr125812 14 55757866 to 55757893 27 + TSS region transcription start site region 125812
Tssr4432 14 55757970 to 55757988 18 - TSS region transcription start site region 4432
Tssr128881 14 55758308 to 55758313 5 - TSS region transcription start site region 128881
Tssr128882 14 55758331 to 55758342 11 - TSS region transcription start site region 128882
Tssr128883 14 55758343 to 55758436 93 - TSS region transcription start site region 128883
Tssr4433 14 55758438 to 55758445 7 - TSS region transcription start site region 4433
Tssr4434 14 55758455 to 55758460 5 - TSS region transcription start site region 4434
Tssr128884 14 55758463 to 55758489 26 - TSS region transcription start site region 128884
Tssr125813 14 55761385 to 55761401 16 + TSS region transcription start site region 125813
Tssr125814 14 55761408 to 55761436 28 + TSS region transcription start site region 125814
Ltb4r2 14 55761428 to 55765138 3710 + protein coding gene leukotriene B4 receptor 2
Cpgi6511 14 55761814 to 55763024 1210 CpG island CpG island 6511
Tssr125815 14 55764687 to 55764728 41 + TSS region transcription start site region 125815
Tssr4435 14 55765706 to 55765709 3 - TSS region transcription start site region 4435
Tssr125816 14 55765834 to 55765867 33 + TSS region transcription start site region 125816
Tssr125817 14 55765956 to 55765999 43 + TSS region transcription start site region 125817
Ltb4r1 14 55765962 to 55768494 2532 + protein coding gene leukotriene B4 receptor 1
Cpgi6512 14 55767495 to 55768407 912 CpG island CpG island 6512
Tssr125818 14 55768826 to 55768837 11 + TSS region transcription start site region 125818
Adcy4 14 55769057 to 55784095 15038 - protein coding gene adenylate cyclase 4
Cpgi6513 14 55783523 to 55783758 235 CpG island CpG island 6513
Tssr128885 14 55783600 to 55783645 45 - TSS region transcription start site region 128885
Cpgi6514 14 55783907 to 55784281 374 CpG island CpG island 6514
Tssr128886 14 55784007 to 55784019 12 - TSS region transcription start site region 128886
Tssr128887 14 55784027 to 55784073 46 - TSS region transcription start site region 128887
Tssr125819 14 55784118 to 55784180 62 + TSS region transcription start site region 125819
Gm32092 14 55784138 to 55793781 9643 + lncRNA gene predicted gene, 32092
Ripk3 14 55784995 to 55788857 3862 - protein coding gene receptor-interacting serine-threonine kinase 3
Cpgi6515 14 55788107 to 55788979 872 CpG island CpG island 6515
Tssr128888 14 55788715 to 55788729 14 - TSS region transcription start site region 128888
Tssr128889 14 55788736 to 55788749 13 - TSS region transcription start site region 128889
Tssr128890 14 55788759 to 55788793 34 - TSS region transcription start site region 128890
Tssr128891 14 55788810 to 55788828 18 - TSS region transcription start site region 128891
Cpgi6516 14 55815074 to 55815306 232 CpG island CpG island 6516
Gm41159 14 55820012 to 55823432 3420 - lncRNA gene predicted gene, 41159
Cpgi6517 14 55823069 to 55823662 593 CpG island CpG island 6517
Nfatc4 14 55824795 to 55833943 9148 + protein coding gene nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 4
Tssr125820 14 55824861 to 55824889 28 + TSS region transcription start site region 125820
Tssr125821 14 55824905 to 55824919 14 + TSS region transcription start site region 125821
Tssr125822 14 55824944 to 55824963 19 + TSS region transcription start site region 125822
Tssr125823 14 55824969 to 55825011 42 + TSS region transcription start site region 125823
Cpgi6518 14 55825245 to 55825811 566 CpG island CpG island 6518
Cpgi6519 14 55826381 to 55826981 600 CpG island CpG island 6519
Cpgi6520 14 55853906 to 55854453 547 CpG island CpG island 6520
Tssr125824 14 55853978 to 55853989 11 + TSS region transcription start site region 125824
Tssr125825 14 55853997 to 55854033 36 + TSS region transcription start site region 125825
Nynrin 14 55854115 to 55874736 20621 + protein coding gene NYN domain and retroviral integrase containing
Tssr125826 14 55854125 to 55854206 81 + TSS region transcription start site region 125826
Gm26751 14 55864311 to 55874735 10424 - lincRNA gene predicted gene, 26751
Tssr128892 14 55878357 to 55878359 2 - TSS region transcription start site region 128892
Cbln3 14 55878920 to 55884256 5336 - protein coding gene cerebellin 3 precursor protein
Tssr128893 14 55881978 to 55881994 16 - TSS region transcription start site region 128893
Tssr128894 14 55882050 to 55882051 1 - TSS region transcription start site region 128894
Tssr128895 14 55882067 to 55882081 14 - TSS region transcription start site region 128895
Tssr128896 14 55882193 to 55882196 3 - TSS region transcription start site region 128896
Tssr128897 14 55882669 to 55882714 45 - TSS region transcription start site region 128897
Tssr128898 14 55882748 to 55882763 15 - TSS region transcription start site region 128898
Tssr128899 14 55882774 to 55882784 10 - TSS region transcription start site region 128899
Tssr128900 14 55882870 to 55882902 32 - TSS region transcription start site region 128900
Tssr128901 14 55884197 to 55884216 19 - TSS region transcription start site region 128901
Tssr128902 14 55884223 to 55884237 14 - TSS region transcription start site region 128902
Tssr128903 14 55884250 to 55884255 5 - TSS region transcription start site region 128903
Tssr128904 14 55884279 to 55884311 32 - TSS region transcription start site region 128904
Tssr128905 14 55884367 to 55884376 9 - TSS region transcription start site region 128905
Cpgi6521 14 55884742 to 55885450 708 CpG island CpG island 6521
Khnyn 14 55884947 to 55898775 13828 + protein coding gene KH and NYN domain containing
Tssr125827 14 55884960 to 55885010 50 + TSS region transcription start site region 125827
Tssr4436 14 55885031 to 55885042 11 + TSS region transcription start site region 4436
Cpgi6522 14 55885669 to 55886070 401 CpG island CpG island 6522
Tssr128906 14 55885978 to 55885987 9 - TSS region transcription start site region 128906
Tssr128907 14 55885997 to 55886009 12 - TSS region transcription start site region 128907
Cpgi6523 14 55887282 to 55887806 524 CpG island CpG island 6523