Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:55605602-55665718

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Irf9 14 55603985 to 55610030 6045 + protein coding gene interferon regulatory factor 9
Tssr125792 14 55617997 to 55618011 14 + TSS region transcription start site region 125792
Tssr125793 14 55618023 to 55618037 14 + TSS region transcription start site region 125793
Rec8 14 55618037 to 55625395 7358 + protein coding gene REC8 meiotic recombination protein
Tssr125794 14 55618126 to 55618137 11 + TSS region transcription start site region 125794
Tssr125795 14 55618138 to 55618183 45 + TSS region transcription start site region 125795
Tssr125796 14 55619038 to 55619063 25 + TSS region transcription start site region 125796
Ipo4 14 55625629 to 55635952 10323 - protein coding gene importin 4
Tssr128845 14 55628357 to 55628373 16 - TSS region transcription start site region 128845
Gm49378 14 55629076 to 55637895 8819 - protein coding gene predicted gene, 49378
Cpgi6502 14 55635141 to 55635907 766 CpG island CpG island 6502
Tssr128846 14 55635602 to 55635718 116 - TSS region transcription start site region 128846
Tm9sf1 14 55635965 to 55643806 7841 - protein coding gene transmembrane 9 superfamily member 1
Cpgi6503 14 55642829 to 55643989 1160 CpG island CpG island 6503
Tssr128847 14 55643306 to 55643382 76 - TSS region transcription start site region 128847
Tssr128848 14 55643543 to 55643600 57 - TSS region transcription start site region 128848
Gm49747 14 55643604 to 55646352 2748 + antisense lncRNA gene predicted gene, 49747
Tssr125797 14 55643628 to 55643666 38 + TSS region transcription start site region 125797
Tssr128849 14 55643720 to 55643764 44 - TSS region transcription start site region 128849
Tssr128850 14 55643800 to 55643822 22 - TSS region transcription start site region 128850
Tssr125798 14 55650162 to 55650167 5 + TSS region transcription start site region 125798
Tssr125799 14 55650170 to 55650197 27 + TSS region transcription start site region 125799
Tssk4 14 55650184 to 55652539 2355 + protein coding gene testis-specific serine kinase 4
Tssr125800 14 55650201 to 55650226 25 + TSS region transcription start site region 125800
Tssr125801 14 55650228 to 55650235 7 + TSS region transcription start site region 125801
Gm49299 14 55654845 to 55658208 3363 - pseudogene predicted gene, 49299
Mdp1 14 55657879 to 55660508 2629 - protein coding gene magnesium-dependent phosphatase 1
Cpgi6504 14 55659970 to 55660667 697 CpG island CpG island 6504
Tssr128851 14 55660239 to 55660259 20 - TSS region transcription start site region 128851
Tssr128852 14 55660273 to 55660314 41 - TSS region transcription start site region 128852
Tssr128853 14 55660397 to 55660466 69 - TSS region transcription start site region 128853
Nedd8 14 55662267 to 55671906 9639 - protein coding gene neural precursor cell expressed, developmentally down-regulated gene 8
Tssr128854 14 55663451 to 55663461 10 - TSS region transcription start site region 128854