Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:55484266-55564270

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dhrs4 14 55478758 to 55490340 11582 + protein coding gene dehydrogenase/reductase (SDR family) member 4
Cpgi6494 14 55490430 to 55491866 1436 CpG island CpG island 6494
Tssr128821 14 55490605 to 55490608 3 - TSS region transcription start site region 128821
Carmil3 14 55490810 to 55508272 17462 + protein coding gene capping protein regulator and myosin 1 linker 3
Tssr125761 14 55491062 to 55491136 74 + TSS region transcription start site region 125761
Cpne6 14 55510445 to 55517431 6986 + protein coding gene copine VI
Tssr4429 14 55510469 to 55510485 16 + TSS region transcription start site region 4429
Tssr4430 14 55510495 to 55510514 19 + TSS region transcription start site region 4430
Tssr125762 14 55510593 to 55510631 38 + TSS region transcription start site region 125762
Tssr128822 14 55511216 to 55511220 4 - TSS region transcription start site region 128822
Nrl 14 55518978 to 55524981 6003 - protein coding gene neural retina leucine zipper gene
Cpgi6495 14 55520444 to 55521267 823 CpG island CpG island 6495
Tssr128823 14 55524209 to 55524223 14 - TSS region transcription start site region 128823
Tssr128824 14 55524266 to 55524270 4 - TSS region transcription start site region 128824
Tssr128825 14 55524916 to 55524930 14 - TSS region transcription start site region 128825
Tssr128826 14 55524938 to 55524967 29 - TSS region transcription start site region 128826
Tssr128827 14 55524975 to 55524985 10 - TSS region transcription start site region 128827
Tssr128828 14 55524989 to 55524996 7 - TSS region transcription start site region 128828
Gm10876 14 55528828 to 55542399 13571 - antisense lncRNA gene predicted gene 10876
Gm49117 14 55537869 to 55539154 1285 + pseudogene predicted gene, 49117
Cpgi6496 14 55540182 to 55540586 404 CpG island CpG island 6496
Pck2 14 55540263 to 55550017 9754 + protein coding gene phosphoenolpyruvate carboxykinase 2 (mitochondrial)
Tssr125763 14 55540288 to 55540315 27 + TSS region transcription start site region 125763
Tssr125764 14 55540351 to 55540370 19 + TSS region transcription start site region 125764
Tssr125765 14 55540372 to 55540446 74 + TSS region transcription start site region 125765
Tssr125766 14 55540467 to 55540478 11 + TSS region transcription start site region 125766
Cpgi6497 14 55559761 to 55560936 1175 CpG island CpG island 6497
A730061H03Rik 14 55559942 to 55560406 464 - protein coding gene RIKEN cDNA A730061H03 gene
Tssr128829 14 55559963 to 55559980 17 - TSS region transcription start site region 128829
Tssr128830 14 55559983 to 55560008 25 - TSS region transcription start site region 128830
Tssr125767 14 55559993 to 55560004 11 + TSS region transcription start site region 125767
Dcaf11 14 55560006 to 55570065 10059 + protein coding gene DDB1 and CUL4 associated factor 11
Tssr125768 14 55560010 to 55560037 27 + TSS region transcription start site region 125768
Tssr128831 14 55560340 to 55560395 55 - TSS region transcription start site region 128831
Tssr125769 14 55560480 to 55560528 48 + TSS region transcription start site region 125769
Tssr125770 14 55560904 to 55560974 70 + TSS region transcription start site region 125770
Tssr125771 14 55561047 to 55561056 9 + TSS region transcription start site region 125771
Tssr125772 14 55561060 to 55561071 11 + TSS region transcription start site region 125772