Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:55479938-55569967

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dhrs4 14 55478758 to 55490340 11582 + protein coding gene dehydrogenase/reductase (SDR family) member 4
Cpgi6493 14 55479937 to 55480204 267 CpG island CpG island 6493
A630031M23Rik 14 55481589 to 55484027 2438 unclassified gene Riken cDNA A630031M23 gene
Cpgi6494 14 55490430 to 55491866 1436 CpG island CpG island 6494
Tssr128821 14 55490605 to 55490608 3 - TSS region transcription start site region 128821
Carmil3 14 55490810 to 55508272 17462 + protein coding gene capping protein regulator and myosin 1 linker 3
Tssr125761 14 55491062 to 55491136 74 + TSS region transcription start site region 125761
Cpne6 14 55510445 to 55517431 6986 + protein coding gene copine VI
Tssr4429 14 55510469 to 55510485 16 + TSS region transcription start site region 4429
Tssr4430 14 55510495 to 55510514 19 + TSS region transcription start site region 4430
Tssr125762 14 55510593 to 55510631 38 + TSS region transcription start site region 125762
Tssr128822 14 55511216 to 55511220 4 - TSS region transcription start site region 128822
Nrl 14 55518978 to 55524981 6003 - protein coding gene neural retina leucine zipper gene
Cpgi6495 14 55520444 to 55521267 823 CpG island CpG island 6495
Tssr128823 14 55524209 to 55524223 14 - TSS region transcription start site region 128823
Tssr128824 14 55524266 to 55524270 4 - TSS region transcription start site region 128824
Tssr128825 14 55524916 to 55524930 14 - TSS region transcription start site region 128825
Tssr128826 14 55524938 to 55524967 29 - TSS region transcription start site region 128826
Tssr128827 14 55524975 to 55524985 10 - TSS region transcription start site region 128827
Tssr128828 14 55524989 to 55524996 7 - TSS region transcription start site region 128828
Gm10876 14 55528828 to 55542399 13571 - antisense lncRNA gene predicted gene 10876
Gm49117 14 55537869 to 55539154 1285 + pseudogene predicted gene, 49117
Cpgi6496 14 55540182 to 55540586 404 CpG island CpG island 6496
Pck2 14 55540263 to 55550017 9754 + protein coding gene phosphoenolpyruvate carboxykinase 2 (mitochondrial)
Tssr125763 14 55540288 to 55540315 27 + TSS region transcription start site region 125763
Tssr125764 14 55540351 to 55540370 19 + TSS region transcription start site region 125764
Tssr125765 14 55540372 to 55540446 74 + TSS region transcription start site region 125765
Tssr125766 14 55540467 to 55540478 11 + TSS region transcription start site region 125766
Cpgi6497 14 55559761 to 55560936 1175 CpG island CpG island 6497
A730061H03Rik 14 55559942 to 55560406 464 - protein coding gene RIKEN cDNA A730061H03 gene
Tssr128829 14 55559963 to 55559980 17 - TSS region transcription start site region 128829
Tssr128830 14 55559983 to 55560008 25 - TSS region transcription start site region 128830
Tssr125767 14 55559993 to 55560004 11 + TSS region transcription start site region 125767
Dcaf11 14 55560006 to 55570065 10059 + protein coding gene DDB1 and CUL4 associated factor 11
Tssr125768 14 55560010 to 55560037 27 + TSS region transcription start site region 125768
Tssr128831 14 55560340 to 55560395 55 - TSS region transcription start site region 128831
Tssr125769 14 55560480 to 55560528 48 + TSS region transcription start site region 125769
Tssr125770 14 55560904 to 55560974 70 + TSS region transcription start site region 125770
Tssr125771 14 55561047 to 55561056 9 + TSS region transcription start site region 125771
Tssr125772 14 55561060 to 55561071 11 + TSS region transcription start site region 125772
Gm15932 14 55566159 to 55575991 9832 - antisense lncRNA gene predicted gene 15932