Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:55171453-55571455

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67 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm46455 14 55174658 to 55180181 5523 + lincRNA gene predicted gene, 46455
Tssr125752 14 55222005 to 55222009 4 + TSS region transcription start site region 125752
Dhrs2 14 55222007 to 55241435 19428 + protein coding gene dehydrogenase/reductase member 2
Gm49021 14 55245606 to 55246059 453 - pseudogene predicted gene, 49021
D14Mit26 14 55254865 to 55254990 125 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 26
D14Mit27 14 55254865 to 55255031 166 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 27
D14Mit25 14 55254869 to 55255007 138 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 25
D14Mit20 14 55254869 to 55254990 121 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 20
Gm49022 14 55276834 to 55280687 3853 - lincRNA gene predicted gene, 49022
Gm6852 14 55349784 to 55350690 906 - pseudogene predicted gene 6852
Tssr125753 14 55371165 to 55371174 9 + TSS region transcription start site region 125753
Tssr125754 14 55371453 to 55371455 2 + TSS region transcription start site region 125754
D14Dcr12 14 55372863 to 55372960 97 DNA segment DNA Segment, Chr 14, Derry C. Roopenian 12
D14Dcr13 14 55380121 to 55380219 98 DNA segment DNA Segment, Chr 14, Derry C. Roopenian 13
Gm49023 14 55383597 to 55394148 10551 + pseudogene predicted gene, 49023
Tssr4428 14 55385460 to 55385464 4 + TSS region transcription start site region 4428
Gm8894 14 55420125 to 55420788 663 - pseudogene predicted gene 8894
D14Mit63 14 55433118 to 55433233 115 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 63
Gm41158 14 55466366 to 55468537 2171 - lncRNA gene predicted gene, 41158
Cpgi6492 14 55478610 to 55478996 386 CpG island CpG island 6492
Tssr125755 14 55478753 to 55478767 14 + TSS region transcription start site region 125755
Dhrs4 14 55478758 to 55490340 11582 + protein coding gene dehydrogenase/reductase (SDR family) member 4
Tssr125756 14 55478770 to 55478795 25 + TSS region transcription start site region 125756
Tssr125757 14 55478802 to 55478807 5 + TSS region transcription start site region 125757
Tssr125758 14 55478815 to 55478820 5 + TSS region transcription start site region 125758
Tssr125759 14 55478867 to 55478914 47 + TSS region transcription start site region 125759
Tssr125760 14 55478924 to 55478941 17 + TSS region transcription start site region 125760
Cpgi6493 14 55479937 to 55480204 267 CpG island CpG island 6493
A630031M23Rik 14 55481589 to 55484027 2438 unclassified gene Riken cDNA A630031M23 gene
Cpgi6494 14 55490430 to 55491866 1436 CpG island CpG island 6494
Tssr128821 14 55490605 to 55490608 3 - TSS region transcription start site region 128821
Carmil3 14 55490810 to 55508272 17462 + protein coding gene capping protein regulator and myosin 1 linker 3
Tssr125761 14 55491062 to 55491136 74 + TSS region transcription start site region 125761
Cpne6 14 55510445 to 55517431 6986 + protein coding gene copine VI
Tssr4429 14 55510469 to 55510485 16 + TSS region transcription start site region 4429
Tssr4430 14 55510495 to 55510514 19 + TSS region transcription start site region 4430
Tssr125762 14 55510593 to 55510631 38 + TSS region transcription start site region 125762
Tssr128822 14 55511216 to 55511220 4 - TSS region transcription start site region 128822
Nrl 14 55518978 to 55524981 6003 - protein coding gene neural retina leucine zipper gene
Cpgi6495 14 55520444 to 55521267 823 CpG island CpG island 6495
Tssr128823 14 55524209 to 55524223 14 - TSS region transcription start site region 128823
Tssr128824 14 55524266 to 55524270 4 - TSS region transcription start site region 128824
Tssr128825 14 55524916 to 55524930 14 - TSS region transcription start site region 128825
Tssr128826 14 55524938 to 55524967 29 - TSS region transcription start site region 128826
Tssr128827 14 55524975 to 55524985 10 - TSS region transcription start site region 128827
Tssr128828 14 55524989 to 55524996 7 - TSS region transcription start site region 128828
Gm10876 14 55528828 to 55542399 13571 - antisense lncRNA gene predicted gene 10876
Gm49117 14 55537869 to 55539154 1285 + pseudogene predicted gene, 49117
Cpgi6496 14 55540182 to 55540586 404 CpG island CpG island 6496
Pck2 14 55540263 to 55550017 9754 + protein coding gene phosphoenolpyruvate carboxykinase 2 (mitochondrial)
Tssr125763 14 55540288 to 55540315 27 + TSS region transcription start site region 125763
Tssr125764 14 55540351 to 55540370 19 + TSS region transcription start site region 125764
Tssr125765 14 55540372 to 55540446 74 + TSS region transcription start site region 125765
Tssr125766 14 55540467 to 55540478 11 + TSS region transcription start site region 125766
Cpgi6497 14 55559761 to 55560936 1175 CpG island CpG island 6497
A730061H03Rik 14 55559942 to 55560406 464 - protein coding gene RIKEN cDNA A730061H03 gene
Tssr128829 14 55559963 to 55559980 17 - TSS region transcription start site region 128829
Tssr128830 14 55559983 to 55560008 25 - TSS region transcription start site region 128830
Tssr125767 14 55559993 to 55560004 11 + TSS region transcription start site region 125767
Dcaf11 14 55560006 to 55570065 10059 + protein coding gene DDB1 and CUL4 associated factor 11
Tssr125768 14 55560010 to 55560037 27 + TSS region transcription start site region 125768
Tssr128831 14 55560340 to 55560395 55 - TSS region transcription start site region 128831
Tssr125769 14 55560480 to 55560528 48 + TSS region transcription start site region 125769
Tssr125770 14 55560904 to 55560974 70 + TSS region transcription start site region 125770
Tssr125771 14 55561047 to 55561056 9 + TSS region transcription start site region 125771
Tssr125772 14 55561060 to 55561071 11 + TSS region transcription start site region 125772
Gm15932 14 55566159 to 55575991 9832 - antisense lncRNA gene predicted gene 15932