Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:55054658-55300181

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50 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm20687 14 55053570 to 55072553 18983 + antisense lncRNA gene predicted gene 20687
Tssr125746 14 55054870 to 55054875 5 + TSS region transcription start site region 125746
Tssr125747 14 55055660 to 55055678 18 + TSS region transcription start site region 125747
Tssr125748 14 55055849 to 55055875 26 + TSS region transcription start site region 125748
Zfhx2 14 55060262 to 55092324 32062 - protein coding gene zinc finger homeobox 2
Cpgi6484 14 55062756 to 55063057 301 CpG island CpG island 6484
Tssr125749 14 55062935 to 55062944 9 + TSS region transcription start site region 125749
Tssr128804 14 55064014 to 55064052 38 - TSS region transcription start site region 128804
Cpgi6485 14 55064872 to 55065396 524 CpG island CpG island 6485
Zfhx2os 14 55073091 to 55075874 2783 + antisense lncRNA gene zinc finger homeobox 2, opposite strand
Cpgi6486 14 55078626 to 55078883 257 CpG island CpG island 6486
Cpgi6487 14 55091377 to 55092489 1112 CpG island CpG island 6487
Tssr128805 14 55091930 to 55091934 4 - TSS region transcription start site region 128805
Tssr128806 14 55092277 to 55092322 45 - TSS region transcription start site region 128806
Tssr128807 14 55092361 to 55092421 60 - TSS region transcription start site region 128807
Cpgi6488 14 55094696 to 55095228 532 CpG island CpG island 6488
Thtpa 14 55094784 to 55098986 4202 + protein coding gene thiamine triphosphatase
Tssr125750 14 55095030 to 55095044 14 + TSS region transcription start site region 125750
Tssr125751 14 55095048 to 55095100 52 + TSS region transcription start site region 125751
Ap1g2 14 55098575 to 55106593 8018 - protein coding gene adaptor protein complex AP-1, gamma 2 subunit
Gm31607 14 55103336 to 55104872 1536 + lncRNA gene predicted gene, 31607
Cpgi6489 14 55104496 to 55104751 255 CpG island CpG island 6489
Cpgi6490 14 55105932 to 55106393 461 CpG island CpG island 6490
Tssr128808 14 55106521 to 55106541 20 - TSS region transcription start site region 128808
Tssr128809 14 55106547 to 55106594 47 - TSS region transcription start site region 128809
Jph4 14 55106826 to 55116935 10109 - protein coding gene junctophilin 4
Tssr128810 14 55107136 to 55107150 14 - TSS region transcription start site region 128810
Cpgi6491 14 55113312 to 55115998 2686 CpG island CpG island 6491
Tssr128811 14 55116165 to 55116190 25 - TSS region transcription start site region 128811
Tssr128812 14 55116204 to 55116226 22 - TSS region transcription start site region 128812
Tssr128813 14 55116228 to 55116273 45 - TSS region transcription start site region 128813
Tssr128814 14 55116397 to 55116408 11 - TSS region transcription start site region 128814
Tssr4427 14 55116413 to 55116416 3 - TSS region transcription start site region 4427
Tssr128815 14 55116547 to 55116554 7 - TSS region transcription start site region 128815
Tssr128816 14 55116561 to 55116585 24 - TSS region transcription start site region 128816
Tssr128817 14 55116586 to 55116609 23 - TSS region transcription start site region 128817
Tssr128818 14 55116615 to 55116637 22 - TSS region transcription start site region 128818
Tssr128819 14 55116640 to 55116649 9 - TSS region transcription start site region 128819
Tssr128820 14 55116944 to 55116980 36 - TSS region transcription start site region 128820
Gm49020 14 55127317 to 55128391 1074 + unclassified gene predicted gene, 49020
Gm23596 14 55161477 to 55161608 131 - snoRNA gene predicted gene, 23596
Gm46455 14 55174658 to 55180181 5523 + lincRNA gene predicted gene, 46455
Tssr125752 14 55222005 to 55222009 4 + TSS region transcription start site region 125752
Dhrs2 14 55222007 to 55241435 19428 + protein coding gene dehydrogenase/reductase member 2
Gm49021 14 55245606 to 55246059 453 - pseudogene predicted gene, 49021
D14Mit27 14 55254865 to 55255031 166 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 27
D14Mit26 14 55254865 to 55254990 125 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 26
D14Mit20 14 55254869 to 55254990 121 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 20
D14Mit25 14 55254869 to 55255007 138 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 25
Gm49022 14 55276834 to 55280687 3853 - lincRNA gene predicted gene, 49022