Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:54980467-56100478

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385 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Myh7 14 54970684 to 54994549 23865 - protein coding gene myosin, heavy polypeptide 7, cardiac muscle, beta
Gm31251 14 54979393 to 54991601 12208 + antisense lncRNA gene predicted gene, 31251
Tssr125733 14 54982170 to 54982176 6 + TSS region transcription start site region 125733
Tssr128771 14 54983283 to 54983308 25 - TSS region transcription start site region 128771
Tssr128772 14 54983316 to 54983327 11 - TSS region transcription start site region 128772
Tssr125734 14 54983333 to 54983362 29 + TSS region transcription start site region 125734
Tssr128773 14 54983348 to 54983359 11 - TSS region transcription start site region 128773
Tssr125735 14 54983366 to 54983376 10 + TSS region transcription start site region 125735
Tssr128774 14 54983375 to 54983404 29 - TSS region transcription start site region 128774
Tssr128775 14 54983411 to 54983417 6 - TSS region transcription start site region 128775
Tssr125736 14 54983550 to 54983573 23 + TSS region transcription start site region 125736
Tssr128776 14 54983601 to 54983646 45 - TSS region transcription start site region 128776
Tssr128777 14 54983770 to 54983791 21 - TSS region transcription start site region 128777
Tssr128778 14 54984732 to 54984749 17 - TSS region transcription start site region 128778
Tssr128779 14 54984753 to 54984762 9 - TSS region transcription start site region 128779
Tssr128780 14 54984800 to 54984817 17 - TSS region transcription start site region 128780
Tssr128781 14 54985124 to 54985142 18 - TSS region transcription start site region 128781
Tssr128782 14 54985147 to 54985158 11 - TSS region transcription start site region 128782
Tssr125737 14 54986504 to 54986521 17 + TSS region transcription start site region 125737
Tssr125738 14 54988309 to 54988344 35 + TSS region transcription start site region 125738
Tssr128783 14 54989100 to 54989112 12 - TSS region transcription start site region 128783
Tssr128784 14 54989127 to 54989140 13 - TSS region transcription start site region 128784
Tssr128785 14 54989318 to 54989323 5 - TSS region transcription start site region 128785
Tssr128786 14 54989367 to 54989376 9 - TSS region transcription start site region 128786
Tssr128787 14 54990368 to 54990382 14 - TSS region transcription start site region 128787
Tssr125739 14 54990731 to 54990748 17 + TSS region transcription start site region 125739
Tssr128788 14 54990953 to 54990967 14 - TSS region transcription start site region 128788
Tssr125740 14 54991098 to 54991113 15 + TSS region transcription start site region 125740
Tssr125741 14 54991266 to 54991279 13 + TSS region transcription start site region 125741
Tssr128789 14 54991599 to 54991646 47 - TSS region transcription start site region 128789
Tssr128790 14 54992206 to 54992220 14 - TSS region transcription start site region 128790
Tssr128791 14 54992427 to 54992438 11 - TSS region transcription start site region 128791
Tssr128792 14 54992698 to 54992711 13 - TSS region transcription start site region 128792
Tssr128793 14 54992723 to 54992740 17 - TSS region transcription start site region 128793
Tssr128794 14 54992796 to 54992807 11 - TSS region transcription start site region 128794
Tssr128795 14 54992833 to 54992847 14 - TSS region transcription start site region 128795
Tssr128796 14 54993335 to 54993354 19 - TSS region transcription start site region 128796
Tssr128797 14 54993357 to 54993382 25 - TSS region transcription start site region 128797
Tssr128798 14 54993385 to 54993421 36 - TSS region transcription start site region 128798
Tssr128799 14 54993684 to 54993695 11 - TSS region transcription start site region 128799
Tssr128800 14 54993737 to 54993746 9 - TSS region transcription start site region 128800
Tssr128801 14 54993767 to 54993797 30 - TSS region transcription start site region 128801
Tssr128802 14 54994281 to 54994315 34 - TSS region transcription start site region 128802
Tssr128803 14 54994541 to 54994557 16 - TSS region transcription start site region 128803
Tssr125742 14 55001132 to 55001157 25 + TSS region transcription start site region 125742
Tssr4426 14 55003351 to 55003398 47 + TSS region transcription start site region 4426
Cpgi6482 14 55014634 to 55016094 1460 CpG island CpG island 6482
Ngdn 14 55015454 to 55024137 8683 + protein coding gene neuroguidin, EIF4E binding protein
Tssr125743 14 55015530 to 55015571 41 + TSS region transcription start site region 125743
Tssr125744 14 55023550 to 55023557 7 + TSS region transcription start site region 125744
Gm10364 14 55038462 to 55042976 4514 + pseudogene predicted pseudogene 10364
Gm20687 14 55053570 to 55072553 18983 + antisense lncRNA gene predicted gene 20687
Tssr125745 14 55053864 to 55053925 61 + TSS region transcription start site region 125745
Cpgi6483 14 55053951 to 55054268 317 CpG island CpG island 6483
Tssr125746 14 55054870 to 55054875 5 + TSS region transcription start site region 125746
Tssr125747 14 55055660 to 55055678 18 + TSS region transcription start site region 125747
Tssr125748 14 55055849 to 55055875 26 + TSS region transcription start site region 125748
Zfhx2 14 55060262 to 55092324 32062 - protein coding gene zinc finger homeobox 2
Cpgi6484 14 55062756 to 55063057 301 CpG island CpG island 6484
Tssr125749 14 55062935 to 55062944 9 + TSS region transcription start site region 125749
Tssr128804 14 55064014 to 55064052 38 - TSS region transcription start site region 128804
Cpgi6485 14 55064872 to 55065396 524 CpG island CpG island 6485
Zfhx2os 14 55073091 to 55075874 2783 + antisense lncRNA gene zinc finger homeobox 2, opposite strand
Cpgi6486 14 55078626 to 55078883 257 CpG island CpG island 6486
Cpgi6487 14 55091377 to 55092489 1112 CpG island CpG island 6487
Tssr128805 14 55091930 to 55091934 4 - TSS region transcription start site region 128805
Tssr128806 14 55092277 to 55092322 45 - TSS region transcription start site region 128806
Tssr128807 14 55092361 to 55092421 60 - TSS region transcription start site region 128807
Cpgi6488 14 55094696 to 55095228 532 CpG island CpG island 6488
Thtpa 14 55094784 to 55098986 4202 + protein coding gene thiamine triphosphatase
Tssr125750 14 55095030 to 55095044 14 + TSS region transcription start site region 125750
Tssr125751 14 55095048 to 55095100 52 + TSS region transcription start site region 125751
Ap1g2 14 55098575 to 55106593 8018 - protein coding gene adaptor protein complex AP-1, gamma 2 subunit
Gm31607 14 55103336 to 55104872 1536 + lncRNA gene predicted gene, 31607
Cpgi6489 14 55104496 to 55104751 255 CpG island CpG island 6489
Cpgi6490 14 55105932 to 55106393 461 CpG island CpG island 6490
Tssr128808 14 55106521 to 55106541 20 - TSS region transcription start site region 128808
Tssr128809 14 55106547 to 55106594 47 - TSS region transcription start site region 128809
Jph4 14 55106826 to 55116935 10109 - protein coding gene junctophilin 4
Tssr128810 14 55107136 to 55107150 14 - TSS region transcription start site region 128810
Cpgi6491 14 55113312 to 55115998 2686 CpG island CpG island 6491
Tssr128811 14 55116165 to 55116190 25 - TSS region transcription start site region 128811
Tssr128812 14 55116204 to 55116226 22 - TSS region transcription start site region 128812
Tssr128813 14 55116228 to 55116273 45 - TSS region transcription start site region 128813
Tssr128814 14 55116397 to 55116408 11 - TSS region transcription start site region 128814
Tssr4427 14 55116413 to 55116416 3 - TSS region transcription start site region 4427
Tssr128815 14 55116547 to 55116554 7 - TSS region transcription start site region 128815
Tssr128816 14 55116561 to 55116585 24 - TSS region transcription start site region 128816
Tssr128817 14 55116586 to 55116609 23 - TSS region transcription start site region 128817
Tssr128818 14 55116615 to 55116637 22 - TSS region transcription start site region 128818
Tssr128819 14 55116640 to 55116649 9 - TSS region transcription start site region 128819
Tssr128820 14 55116944 to 55116980 36 - TSS region transcription start site region 128820
Gm49020 14 55127317 to 55128391 1074 + unclassified gene predicted gene, 49020
Gm23596 14 55161477 to 55161608 131 - snoRNA gene predicted gene, 23596
Gm46455 14 55174658 to 55180181 5523 + lincRNA gene predicted gene, 46455
Tssr125752 14 55222005 to 55222009 4 + TSS region transcription start site region 125752
Dhrs2 14 55222007 to 55241435 19428 + protein coding gene dehydrogenase/reductase member 2
Gm49021 14 55245606 to 55246059 453 - pseudogene predicted gene, 49021
D14Mit27 14 55254865 to 55255031 166 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 27
D14Mit26 14 55254865 to 55254990 125 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 26
D14Mit25 14 55254869 to 55255007 138 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 25
D14Mit20 14 55254869 to 55254990 121 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 20
Gm49022 14 55276834 to 55280687 3853 - lincRNA gene predicted gene, 49022
Gm6852 14 55349784 to 55350690 906 - pseudogene predicted gene 6852
Tssr125753 14 55371165 to 55371174 9 + TSS region transcription start site region 125753
Tssr125754 14 55371453 to 55371455 2 + TSS region transcription start site region 125754
D14Dcr12 14 55372863 to 55372960 97 DNA segment DNA Segment, Chr 14, Derry C. Roopenian 12
D14Dcr13 14 55380121 to 55380219 98 DNA segment DNA Segment, Chr 14, Derry C. Roopenian 13
Gm49023 14 55383597 to 55394148 10551 + pseudogene predicted gene, 49023
Tssr4428 14 55385460 to 55385464 4 + TSS region transcription start site region 4428
Gm8894 14 55420125 to 55420788 663 - pseudogene predicted gene 8894
D14Mit63 14 55433118 to 55433233 115 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 63
Gm41158 14 55466366 to 55468537 2171 - lncRNA gene predicted gene, 41158
Cpgi6492 14 55478610 to 55478996 386 CpG island CpG island 6492
Tssr125755 14 55478753 to 55478767 14 + TSS region transcription start site region 125755
Dhrs4 14 55478758 to 55490340 11582 + protein coding gene dehydrogenase/reductase (SDR family) member 4
Tssr125756 14 55478770 to 55478795 25 + TSS region transcription start site region 125756
Tssr125757 14 55478802 to 55478807 5 + TSS region transcription start site region 125757
Tssr125758 14 55478815 to 55478820 5 + TSS region transcription start site region 125758
Tssr125759 14 55478867 to 55478914 47 + TSS region transcription start site region 125759
Tssr125760 14 55478924 to 55478941 17 + TSS region transcription start site region 125760
Cpgi6493 14 55479937 to 55480204 267 CpG island CpG island 6493
A630031M23Rik 14 55481589 to 55484027 2438 unclassified gene Riken cDNA A630031M23 gene
Cpgi6494 14 55490430 to 55491866 1436 CpG island CpG island 6494
Tssr128821 14 55490605 to 55490608 3 - TSS region transcription start site region 128821
Carmil3 14 55490810 to 55508272 17462 + protein coding gene capping protein regulator and myosin 1 linker 3
Tssr125761 14 55491062 to 55491136 74 + TSS region transcription start site region 125761
Cpne6 14 55510445 to 55517431 6986 + protein coding gene copine VI
Tssr4429 14 55510469 to 55510485 16 + TSS region transcription start site region 4429
Tssr4430 14 55510495 to 55510514 19 + TSS region transcription start site region 4430
Tssr125762 14 55510593 to 55510631 38 + TSS region transcription start site region 125762
Tssr128822 14 55511216 to 55511220 4 - TSS region transcription start site region 128822
Nrl 14 55518978 to 55524981 6003 - protein coding gene neural retina leucine zipper gene
Cpgi6495 14 55520444 to 55521267 823 CpG island CpG island 6495
Tssr128823 14 55524209 to 55524223 14 - TSS region transcription start site region 128823
Tssr128824 14 55524266 to 55524270 4 - TSS region transcription start site region 128824
Tssr128825 14 55524916 to 55524930 14 - TSS region transcription start site region 128825
Tssr128826 14 55524938 to 55524967 29 - TSS region transcription start site region 128826
Tssr128827 14 55524975 to 55524985 10 - TSS region transcription start site region 128827
Tssr128828 14 55524989 to 55524996 7 - TSS region transcription start site region 128828
Gm10876 14 55528828 to 55542399 13571 - antisense lncRNA gene predicted gene 10876
Gm49117 14 55537869 to 55539154 1285 + pseudogene predicted gene, 49117
Cpgi6496 14 55540182 to 55540586 404 CpG island CpG island 6496
Pck2 14 55540263 to 55550017 9754 + protein coding gene phosphoenolpyruvate carboxykinase 2 (mitochondrial)
Tssr125763 14 55540288 to 55540315 27 + TSS region transcription start site region 125763
Tssr125764 14 55540351 to 55540370 19 + TSS region transcription start site region 125764
Tssr125765 14 55540372 to 55540446 74 + TSS region transcription start site region 125765
Tssr125766 14 55540467 to 55540478 11 + TSS region transcription start site region 125766
Cpgi6497 14 55559761 to 55560936 1175 CpG island CpG island 6497
A730061H03Rik 14 55559942 to 55560406 464 - protein coding gene RIKEN cDNA A730061H03 gene
Tssr128829 14 55559963 to 55559980 17 - TSS region transcription start site region 128829
Tssr128830 14 55559983 to 55560008 25 - TSS region transcription start site region 128830
Tssr125767 14 55559993 to 55560004 11 + TSS region transcription start site region 125767
Dcaf11 14 55560006 to 55570065 10059 + protein coding gene DDB1 and CUL4 associated factor 11
Tssr125768 14 55560010 to 55560037 27 + TSS region transcription start site region 125768
Tssr128831 14 55560340 to 55560395 55 - TSS region transcription start site region 128831
Tssr125769 14 55560480 to 55560528 48 + TSS region transcription start site region 125769
Tssr125770 14 55560904 to 55560974 70 + TSS region transcription start site region 125770
Tssr125771 14 55561047 to 55561056 9 + TSS region transcription start site region 125771
Tssr125772 14 55561060 to 55561071 11 + TSS region transcription start site region 125772
Gm15932 14 55566159 to 55575991 9832 - antisense lncRNA gene predicted gene 15932
Tssr125773 14 55575534 to 55575568 34 + TSS region transcription start site region 125773
Tssr125774 14 55575619 to 55575660 41 + TSS region transcription start site region 125774
Fitm1 14 55575674 to 55576952 1278 + protein coding gene fat storage-inducing transmembrane protein 1
Tssr4431 14 55575705 to 55575710 5 + TSS region transcription start site region 4431
Tssr125775 14 55575715 to 55575801 86 + TSS region transcription start site region 125775
Cpgi6498 14 55575723 to 55576010 287 CpG island CpG island 6498
Tssr125776 14 55575805 to 55575852 47 + TSS region transcription start site region 125776
Tssr125777 14 55575855 to 55575866 11 + TSS region transcription start site region 125777
Cpgi6499 14 55578154 to 55578700 546 CpG island CpG island 6499
Tssr125778 14 55578161 to 55578180 19 + TSS region transcription start site region 125778
Tssr125779 14 55578356 to 55578366 10 + TSS region transcription start site region 125779
Tssr125780 14 55578422 to 55578437 15 + TSS region transcription start site region 125780
Tssr125781 14 55578444 to 55578539 95 + TSS region transcription start site region 125781
Psme1 14 55578494 to 55581527 3033 + protein coding gene proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)
Tssr125782 14 55578542 to 55578561 19 + TSS region transcription start site region 125782
Tssr128832 14 55578823 to 55578841 18 - TSS region transcription start site region 128832
Tssr128833 14 55580125 to 55580164 39 - TSS region transcription start site region 128833
Tssr125783 14 55580914 to 55580948 34 + TSS region transcription start site region 125783
Emc9 14 55581516 to 55585302 3786 - protein coding gene ER membrane protein complex subunit 9
Cpgi6500 14 55584719 to 55585311 592 CpG island CpG island 6500
Tssr128834 14 55585250 to 55585317 67 - TSS region transcription start site region 128834
Psme2 14 55587441 to 55591113 3672 - protein coding gene proteasome (prosome, macropain) activator subunit 2 (PA28 beta)
Tssr128835 14 55588317 to 55588328 11 - TSS region transcription start site region 128835
Tssr128836 14 55589985 to 55590003 18 - TSS region transcription start site region 128836
Tssr128837 14 55590810 to 55590849 39 - TSS region transcription start site region 128837
Tssr128838 14 55590918 to 55590969 51 - TSS region transcription start site region 128838
Tssr125784 14 55590985 to 55591006 21 + TSS region transcription start site region 125784
Tssr128839 14 55591054 to 55591070 16 - TSS region transcription start site region 128839
Tssr128840 14 55591077 to 55591118 41 - TSS region transcription start site region 128840
Cpgi6501 14 55591123 to 55592436 1313 CpG island CpG island 6501
Tssr125785 14 55591161 to 55591175 14 + TSS region transcription start site region 125785
Tssr128841 14 55591479 to 55591506 27 - TSS region transcription start site region 128841
Tssr128842 14 55591540 to 55591574 34 - TSS region transcription start site region 128842
Rnf31 14 55591713 to 55603674 11961 + protein coding gene ring finger protein 31
Tssr125786 14 55591725 to 55591785 60 + TSS region transcription start site region 125786
Tssr125787 14 55591786 to 55591809 23 + TSS region transcription start site region 125787
Tssr125788 14 55591819 to 55591859 40 + TSS region transcription start site region 125788
Tssr128843 14 55603969 to 55604002 33 - TSS region transcription start site region 128843
Irf9 14 55603985 to 55610030 6045 + protein coding gene interferon regulatory factor 9