Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:54975048-55215100

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105 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Myh7 14 54970684 to 54994549 23865 - protein coding gene myosin, heavy polypeptide 7, cardiac muscle, beta
Tssr128767 14 54975364 to 54975405 41 - TSS region transcription start site region 128767
Mir208b 14 54975700 to 54975776 76 - miRNA gene microRNA 208b
Tssr125730 14 54975970 to 54976000 30 + TSS region transcription start site region 125730
Tssr128768 14 54975979 to 54976006 27 - TSS region transcription start site region 128768
Tssr128769 14 54976069 to 54976082 13 - TSS region transcription start site region 128769
Tssr125731 14 54976671 to 54976676 5 + TSS region transcription start site region 125731
Tssr125732 14 54976816 to 54976832 16 + TSS region transcription start site region 125732
Gm17428 14 54976933 to 54977025 92 + protein coding gene predicted gene, 17428
Tssr128770 14 54978661 to 54978681 20 - TSS region transcription start site region 128770
Cpgi6481 14 54979285 to 54979456 171 CpG island CpG island 6481
Gm31251 14 54979393 to 54991601 12208 + antisense lncRNA gene predicted gene, 31251
Tssr125733 14 54982170 to 54982176 6 + TSS region transcription start site region 125733
Tssr128771 14 54983283 to 54983308 25 - TSS region transcription start site region 128771
Tssr128772 14 54983316 to 54983327 11 - TSS region transcription start site region 128772
Tssr125734 14 54983333 to 54983362 29 + TSS region transcription start site region 125734
Tssr128773 14 54983348 to 54983359 11 - TSS region transcription start site region 128773
Tssr125735 14 54983366 to 54983376 10 + TSS region transcription start site region 125735
Tssr128774 14 54983375 to 54983404 29 - TSS region transcription start site region 128774
Tssr128775 14 54983411 to 54983417 6 - TSS region transcription start site region 128775
Tssr125736 14 54983550 to 54983573 23 + TSS region transcription start site region 125736
Tssr128776 14 54983601 to 54983646 45 - TSS region transcription start site region 128776
Tssr128777 14 54983770 to 54983791 21 - TSS region transcription start site region 128777
Tssr128778 14 54984732 to 54984749 17 - TSS region transcription start site region 128778
Tssr128779 14 54984753 to 54984762 9 - TSS region transcription start site region 128779
Tssr128780 14 54984800 to 54984817 17 - TSS region transcription start site region 128780
Tssr128781 14 54985124 to 54985142 18 - TSS region transcription start site region 128781
Tssr128782 14 54985147 to 54985158 11 - TSS region transcription start site region 128782
Tssr125737 14 54986504 to 54986521 17 + TSS region transcription start site region 125737
Tssr125738 14 54988309 to 54988344 35 + TSS region transcription start site region 125738
Tssr128783 14 54989100 to 54989112 12 - TSS region transcription start site region 128783
Tssr128784 14 54989127 to 54989140 13 - TSS region transcription start site region 128784
Tssr128785 14 54989318 to 54989323 5 - TSS region transcription start site region 128785
Tssr128786 14 54989367 to 54989376 9 - TSS region transcription start site region 128786
Tssr128787 14 54990368 to 54990382 14 - TSS region transcription start site region 128787
Tssr125739 14 54990731 to 54990748 17 + TSS region transcription start site region 125739
Tssr128788 14 54990953 to 54990967 14 - TSS region transcription start site region 128788
Tssr125740 14 54991098 to 54991113 15 + TSS region transcription start site region 125740
Tssr125741 14 54991266 to 54991279 13 + TSS region transcription start site region 125741
Tssr128789 14 54991599 to 54991646 47 - TSS region transcription start site region 128789
Tssr128790 14 54992206 to 54992220 14 - TSS region transcription start site region 128790
Tssr128791 14 54992427 to 54992438 11 - TSS region transcription start site region 128791
Tssr128792 14 54992698 to 54992711 13 - TSS region transcription start site region 128792
Tssr128793 14 54992723 to 54992740 17 - TSS region transcription start site region 128793
Tssr128794 14 54992796 to 54992807 11 - TSS region transcription start site region 128794
Tssr128795 14 54992833 to 54992847 14 - TSS region transcription start site region 128795
Tssr128796 14 54993335 to 54993354 19 - TSS region transcription start site region 128796
Tssr128797 14 54993357 to 54993382 25 - TSS region transcription start site region 128797
Tssr128798 14 54993385 to 54993421 36 - TSS region transcription start site region 128798
Tssr128799 14 54993684 to 54993695 11 - TSS region transcription start site region 128799
Tssr128800 14 54993737 to 54993746 9 - TSS region transcription start site region 128800
Tssr128801 14 54993767 to 54993797 30 - TSS region transcription start site region 128801
Tssr128802 14 54994281 to 54994315 34 - TSS region transcription start site region 128802
Tssr128803 14 54994541 to 54994557 16 - TSS region transcription start site region 128803
Tssr125742 14 55001132 to 55001157 25 + TSS region transcription start site region 125742
Tssr4426 14 55003351 to 55003398 47 + TSS region transcription start site region 4426
Cpgi6482 14 55014634 to 55016094 1460 CpG island CpG island 6482
Ngdn 14 55015454 to 55024137 8683 + protein coding gene neuroguidin, EIF4E binding protein
Tssr125743 14 55015530 to 55015571 41 + TSS region transcription start site region 125743
Tssr125744 14 55023550 to 55023557 7 + TSS region transcription start site region 125744
Gm10364 14 55038462 to 55042976 4514 + pseudogene predicted pseudogene 10364
Gm20687 14 55053570 to 55072553 18983 + antisense lncRNA gene predicted gene 20687
Tssr125745 14 55053864 to 55053925 61 + TSS region transcription start site region 125745
Cpgi6483 14 55053951 to 55054268 317 CpG island CpG island 6483
Tssr125746 14 55054870 to 55054875 5 + TSS region transcription start site region 125746
Tssr125747 14 55055660 to 55055678 18 + TSS region transcription start site region 125747
Tssr125748 14 55055849 to 55055875 26 + TSS region transcription start site region 125748
Zfhx2 14 55060262 to 55092324 32062 - protein coding gene zinc finger homeobox 2
Cpgi6484 14 55062756 to 55063057 301 CpG island CpG island 6484
Tssr125749 14 55062935 to 55062944 9 + TSS region transcription start site region 125749
Tssr128804 14 55064014 to 55064052 38 - TSS region transcription start site region 128804
Cpgi6485 14 55064872 to 55065396 524 CpG island CpG island 6485
Zfhx2os 14 55073091 to 55075874 2783 + antisense lncRNA gene zinc finger homeobox 2, opposite strand
Cpgi6486 14 55078626 to 55078883 257 CpG island CpG island 6486
Cpgi6487 14 55091377 to 55092489 1112 CpG island CpG island 6487
Tssr128805 14 55091930 to 55091934 4 - TSS region transcription start site region 128805
Tssr128806 14 55092277 to 55092322 45 - TSS region transcription start site region 128806
Tssr128807 14 55092361 to 55092421 60 - TSS region transcription start site region 128807
Cpgi6488 14 55094696 to 55095228 532 CpG island CpG island 6488
Thtpa 14 55094784 to 55098986 4202 + protein coding gene thiamine triphosphatase
Tssr125750 14 55095030 to 55095044 14 + TSS region transcription start site region 125750
Tssr125751 14 55095048 to 55095100 52 + TSS region transcription start site region 125751
Ap1g2 14 55098575 to 55106593 8018 - protein coding gene adaptor protein complex AP-1, gamma 2 subunit
Gm31607 14 55103336 to 55104872 1536 + lncRNA gene predicted gene, 31607
Cpgi6489 14 55104496 to 55104751 255 CpG island CpG island 6489
Cpgi6490 14 55105932 to 55106393 461 CpG island CpG island 6490
Tssr128808 14 55106521 to 55106541 20 - TSS region transcription start site region 128808
Tssr128809 14 55106547 to 55106594 47 - TSS region transcription start site region 128809
Jph4 14 55106826 to 55116935 10109 - protein coding gene junctophilin 4
Tssr128810 14 55107136 to 55107150 14 - TSS region transcription start site region 128810
Cpgi6491 14 55113312 to 55115998 2686 CpG island CpG island 6491
Tssr128811 14 55116165 to 55116190 25 - TSS region transcription start site region 128811
Tssr128812 14 55116204 to 55116226 22 - TSS region transcription start site region 128812
Tssr128813 14 55116228 to 55116273 45 - TSS region transcription start site region 128813
Tssr128814 14 55116397 to 55116408 11 - TSS region transcription start site region 128814
Tssr4427 14 55116413 to 55116416 3 - TSS region transcription start site region 4427
Tssr128815 14 55116547 to 55116554 7 - TSS region transcription start site region 128815
Tssr128816 14 55116561 to 55116585 24 - TSS region transcription start site region 128816
Tssr128817 14 55116586 to 55116609 23 - TSS region transcription start site region 128817
Tssr128818 14 55116615 to 55116637 22 - TSS region transcription start site region 128818
Tssr128819 14 55116640 to 55116649 9 - TSS region transcription start site region 128819
Tssr128820 14 55116944 to 55116980 36 - TSS region transcription start site region 128820
Gm49020 14 55127317 to 55128391 1074 + unclassified gene predicted gene, 49020
Gm23596 14 55161477 to 55161608 131 - snoRNA gene predicted gene, 23596
Gm46455 14 55174658 to 55180181 5523 + lincRNA gene predicted gene, 46455