Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:54866304-54953132

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108 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Homez 14 54852736 to 54870961 18225 - protein coding gene homeodomain leucine zipper-encoding gene
Tssr128649 14 54870913 to 54870947 34 - TSS region transcription start site region 128649
Tssr128650 14 54875036 to 54875071 35 - TSS region transcription start site region 128650
Ppp1r3e 14 54875597 to 54877538 1941 - protein coding gene protein phosphatase 1, regulatory subunit 3E
Cpgi6476 14 54875924 to 54877870 1946 CpG island CpG island 6476
Tssr128651 14 54877132 to 54877177 45 - TSS region transcription start site region 128651
Tssr128652 14 54877532 to 54877552 20 - TSS region transcription start site region 128652
Tssr125671 14 54883320 to 54883391 71 + TSS region transcription start site region 125671
Bcl2l2 14 54883377 to 54888234 4857 + protein coding gene BCL2-like 2
Tssr125672 14 54883430 to 54883489 59 + TSS region transcription start site region 125672
Gm20521 14 54883441 to 54898137 14696 + protein coding gene predicted gene 20521
Tssr125673 14 54883570 to 54883594 24 + TSS region transcription start site region 125673
Tssr125674 14 54891520 to 54891524 4 + TSS region transcription start site region 125674
Tssr125675 14 54892492 to 54892500 8 + TSS region transcription start site region 125675
Cpgi6477 14 54893596 to 54894869 1273 CpG island CpG island 6477
Tssr128653 14 54893859 to 54893899 40 - TSS region transcription start site region 128653
Tssr4415 14 54893977 to 54893998 21 + TSS region transcription start site region 4415
Tssr4416 14 54894046 to 54894049 3 + TSS region transcription start site region 4416
Tssr125676 14 54894133 to 54894153 20 + TSS region transcription start site region 125676
Pabpn1 14 54894143 to 54898927 4784 + protein coding gene poly(A) binding protein, nuclear 1
Tssr4417 14 54894170 to 54894175 5 + TSS region transcription start site region 4417
Tssr4418 14 54894274 to 54894323 49 + TSS region transcription start site region 4418
Tssr125677 14 54894578 to 54894627 49 + TSS region transcription start site region 125677
Tssr128654 14 54894877 to 54894915 38 - TSS region transcription start site region 128654
Tssr125678 14 54897162 to 54897189 27 + TSS region transcription start site region 125678
Tssr125679 14 54898395 to 54898415 20 + TSS region transcription start site region 125679
Slc22a17 14 54906304 to 54913132 6828 - protein coding gene solute carrier family 22 (organic cation transporter), member 17
Tssr128655 14 54907157 to 54907168 11 - TSS region transcription start site region 128655
Tssr128656 14 54907578 to 54907597 19 - TSS region transcription start site region 128656
Tssr128657 14 54908910 to 54908926 16 - TSS region transcription start site region 128657
Cpgi6478 14 54911959 to 54913306 1347 CpG island CpG island 6478
Tssr128658 14 54912317 to 54912331 14 - TSS region transcription start site region 128658
Tssr128659 14 54912443 to 54912458 15 - TSS region transcription start site region 128659
Tssr128660 14 54913037 to 54913042 5 - TSS region transcription start site region 128660
Tssr128661 14 54913064 to 54913084 20 - TSS region transcription start site region 128661
Tssr128662 14 54913089 to 54913128 39 - TSS region transcription start site region 128662
Efs 14 54916535 to 54926126 9591 - protein coding gene embryonal Fyn-associated substrate
Tssr128663 14 54919834 to 54919865 31 - TSS region transcription start site region 128663
Tssr125680 14 54924823 to 54924839 16 + TSS region transcription start site region 125680
Tssr128664 14 54925581 to 54925599 18 - TSS region transcription start site region 128664
Tssr128665 14 54925608 to 54925633 25 - TSS region transcription start site region 128665
Tssr128666 14 54925639 to 54925684 45 - TSS region transcription start site region 128666
Cpgi6479 14 54925659 to 54927068 1409 CpG island CpG island 6479
Tssr128667 14 54925796 to 54925807 11 - TSS region transcription start site region 128667
Tssr128668 14 54925810 to 54925852 42 - TSS region transcription start site region 128668
Tssr128669 14 54925854 to 54925888 34 - TSS region transcription start site region 128669
Tssr128670 14 54925996 to 54926021 25 - TSS region transcription start site region 128670
Tssr128671 14 54926337 to 54926355 18 - TSS region transcription start site region 128671
Tssr128672 14 54926563 to 54926572 9 - TSS region transcription start site region 128672
Tssr128673 14 54926587 to 54926606 19 - TSS region transcription start site region 128673
Tssr128674 14 54926744 to 54926770 26 - TSS region transcription start site region 128674
Tssr128675 14 54926784 to 54926805 21 - TSS region transcription start site region 128675
Tssr128676 14 54927008 to 54927028 20 - TSS region transcription start site region 128676
Il25 14 54932695 to 54935837 3142 + protein coding gene interleukin 25
Tssr125681 14 54933044 to 54933056 12 + TSS region transcription start site region 125681
Tssr125682 14 54936239 to 54936303 64 + TSS region transcription start site region 125682
Cmtm5 14 54936261 to 54939274 3013 + protein coding gene CKLF-like MARVEL transmembrane domain containing 5
Tssr125683 14 54936456 to 54936478 22 + TSS region transcription start site region 125683
Tssr125684 14 54936480 to 54936534 54 + TSS region transcription start site region 125684
Tssr125685 14 54937739 to 54937749 10 + TSS region transcription start site region 125685
Tssr125686 14 54937755 to 54937785 30 + TSS region transcription start site region 125686
Tssr125687 14 54937819 to 54937828 9 + TSS region transcription start site region 125687
Tssr125688 14 54938431 to 54938437 6 + TSS region transcription start site region 125688
Tssr125689 14 54938470 to 54938479 9 + TSS region transcription start site region 125689
Tssr125690 14 54938482 to 54938493 11 + TSS region transcription start site region 125690
Tssr125691 14 54938579 to 54938585 6 + TSS region transcription start site region 125691
Tssr125692 14 54938608 to 54938615 7 + TSS region transcription start site region 125692
Tssr125693 14 54938622 to 54938637 15 + TSS region transcription start site region 125693
Gm49130 14 54940355 to 54942852 2497 + antisense lncRNA gene predicted gene, 49130
D14Mit268 14 54940840 to 54941133 293 DNA segment DNA Segment, Chr 14, Massachusetts Institute of Technology 268
Myh6 14 54941921 to 54966927 25006 - protein coding gene myosin, heavy polypeptide 6, cardiac muscle, alpha
Tssr125694 14 54944286 to 54944326 40 + TSS region transcription start site region 125694
Tssr128677 14 54944740 to 54944774 34 - TSS region transcription start site region 128677
Tssr128678 14 54946483 to 54946502 19 - TSS region transcription start site region 128678
Tssr128679 14 54946508 to 54946522 14 - TSS region transcription start site region 128679
Tssr128680 14 54946948 to 54946996 48 - TSS region transcription start site region 128680
Tssr128681 14 54947001 to 54947010 9 - TSS region transcription start site region 128681
Tssr128682 14 54947193 to 54947206 13 - TSS region transcription start site region 128682
Tssr125695 14 54948134 to 54948150 16 + TSS region transcription start site region 125695
Tssr125696 14 54948151 to 54948170 19 + TSS region transcription start site region 125696
Tssr128683 14 54948157 to 54948171 14 - TSS region transcription start site region 128683
Tssr128684 14 54948741 to 54948766 25 - TSS region transcription start site region 128684
Mir208a 14 54949060 to 54949142 82 - miRNA gene microRNA 208a
Tssr125697 14 54949427 to 54949456 29 + TSS region transcription start site region 125697
Tssr128685 14 54949429 to 54949466 37 - TSS region transcription start site region 128685
Tssr128686 14 54949509 to 54949542 33 - TSS region transcription start site region 128686
Tssr125698 14 54949897 to 54949910 13 + TSS region transcription start site region 125698
Tssr128687 14 54949900 to 54949909 9 - TSS region transcription start site region 128687
Tssr125699 14 54949917 to 54949939 22 + TSS region transcription start site region 125699
Tssr128688 14 54949926 to 54949933 7 - TSS region transcription start site region 128688
Tssr128689 14 54949953 to 54949966 13 - TSS region transcription start site region 128689
Tssr125700 14 54950041 to 54950063 22 + TSS region transcription start site region 125700
Cpgi6480 14 54950097 to 54950498 401 CpG island CpG island 6480
Tssr128690 14 54950100 to 54950151 51 - TSS region transcription start site region 128690
Tssr125701 14 54950105 to 54950128 23 + TSS region transcription start site region 125701
Tssr128691 14 54950162 to 54950181 19 - TSS region transcription start site region 128691
Tssr125702 14 54950523 to 54950541 18 + TSS region transcription start site region 125702
Tssr125703 14 54950577 to 54950617 40 + TSS region transcription start site region 125703
Tssr128692 14 54952280 to 54952290 10 - TSS region transcription start site region 128692
Tssr125704 14 54952281 to 54952299 18 + TSS region transcription start site region 125704
Tssr128693 14 54952319 to 54952328 9 - TSS region transcription start site region 128693
Tssr125705 14 54952660 to 54952682 22 + TSS region transcription start site region 125705
Tssr128694 14 54952989 to 54953023 34 - TSS region transcription start site region 128694
Tssr125706 14 54953024 to 54953078 54 + TSS region transcription start site region 125706
Tssr128695 14 54953049 to 54953069 20 - TSS region transcription start site region 128695
Tssr128696 14 54953072 to 54953116 44 - TSS region transcription start site region 128696
Tssr125707 14 54953079 to 54953110 31 + TSS region transcription start site region 125707
Tssr128697 14 54953121 to 54953132 11 - TSS region transcription start site region 128697