Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:54679144-54949156

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137 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Acin1 14 54642161 to 54686931 44770 - protein coding gene apoptotic chromatin condensation inducer 1
Gm8776 14 54681098 to 54681726 628 + pseudogene predicted gene 8776
Tssr125664 14 54681099 to 54681100 1 + TSS region transcription start site region 125664
Cpgi6471 14 54686011 to 54687060 1049 CpG island CpG island 6471
Tssr128618 14 54686132 to 54686167 35 - TSS region transcription start site region 128618
Tssr128619 14 54686169 to 54686198 29 - TSS region transcription start site region 128619
Tssr4413 14 54686170 to 54686184 14 + TSS region transcription start site region 4413
Tssr125665 14 54686201 to 54686230 29 + TSS region transcription start site region 125665
1700123O20Rik 14 54686216 to 54690741 4525 + protein coding gene RIKEN cDNA 1700123O20 gene
Tssr125666 14 54686242 to 54686261 19 + TSS region transcription start site region 125666
Tssr128620 14 54686272 to 54686283 11 - TSS region transcription start site region 128620
Tssr125667 14 54686373 to 54686398 25 + TSS region transcription start site region 125667
Tssr128621 14 54686605 to 54686647 42 - TSS region transcription start site region 128621
Tssr128622 14 54686926 to 54686970 44 - TSS region transcription start site region 128622
Tssr125668 14 54686982 to 54687063 81 + TSS region transcription start site region 125668
Gm29776 14 54692598 to 54698833 6235 - protein coding gene predicted gene, 29776
Cebpe 14 54710363 to 54712174 1811 - protein coding gene CCAAT/enhancer binding protein (C/EBP), epsilon
Cpgi6472 14 54710597 to 54710792 195 CpG island CpG island 6472
Tssr4414 14 54711903 to 54711949 46 - TSS region transcription start site region 4414
Tssr128623 14 54712120 to 54712134 14 - TSS region transcription start site region 128623
Tssr128624 14 54712139 to 54712153 14 - TSS region transcription start site region 128624
Tssr128625 14 54712330 to 54712367 37 - TSS region transcription start site region 128625
Tssr128626 14 54712397 to 54712408 11 - TSS region transcription start site region 128626
Slc7a8 14 54722215 to 54781886 59671 - protein coding gene solute carrier family 7 (cationic amino acid transporter, y+ system), member 8
Tssr128627 14 54723269 to 54723281 12 - TSS region transcription start site region 128627
Tssr128628 14 54723366 to 54723391 25 - TSS region transcription start site region 128628
Tssr128629 14 54723571 to 54723578 7 - TSS region transcription start site region 128629
Tssr128630 14 54723761 to 54723782 21 - TSS region transcription start site region 128630
Tssr128631 14 54723802 to 54723821 19 - TSS region transcription start site region 128631
Tssr125669 14 54723953 to 54723965 12 + TSS region transcription start site region 125669
Tssr128632 14 54724038 to 54724049 11 - TSS region transcription start site region 128632
Tssr128633 14 54724066 to 54724086 20 - TSS region transcription start site region 128633
Tssr128634 14 54724098 to 54724109 11 - TSS region transcription start site region 128634
Tssr128635 14 54724179 to 54724191 12 - TSS region transcription start site region 128635
Tssr128636 14 54724208 to 54724217 9 - TSS region transcription start site region 128636
Tssr128637 14 54724794 to 54724808 14 - TSS region transcription start site region 128637
Tssr128638 14 54726752 to 54726802 50 - TSS region transcription start site region 128638
Tssr128639 14 54726816 to 54726827 11 - TSS region transcription start site region 128639
Tssr128640 14 54733249 to 54733263 14 - TSS region transcription start site region 128640
Tssr128641 14 54740124 to 54740129 5 - TSS region transcription start site region 128641
Tssr128642 14 54752164 to 54752212 48 - TSS region transcription start site region 128642
Tssr128643 14 54759672 to 54759683 11 - TSS region transcription start site region 128643
Tssr128644 14 54768353 to 54768395 42 - TSS region transcription start site region 128644
Tssr128645 14 54779802 to 54779815 13 - TSS region transcription start site region 128645
Cpgi6473 14 54781106 to 54782041 935 CpG island CpG island 6473
Tssr128646 14 54781906 to 54781925 19 - TSS region transcription start site region 128646
Tssr128647 14 54781934 to 54781952 18 - TSS region transcription start site region 128647
Gm17772 14 54805746 to 54806096 350 - pseudogene predicted gene, 17772
Cpgi6474 14 54814011 to 54814352 341 CpG island CpG island 6474
Rnf212b 14 54814141 to 54854108 39967 + protein coding gene ring finger protein 212B
Tssr125670 14 54814144 to 54814156 12 + TSS region transcription start site region 125670
Gm8865 14 54826247 to 54826676 429 - pseudogene predicted gene 8865
Homez 14 54852736 to 54870961 18225 - protein coding gene homeodomain leucine zipper-encoding gene
Cpgi6475 14 54863647 to 54864612 965 CpG island CpG island 6475
Tssr128648 14 54864055 to 54864151 96 - TSS region transcription start site region 128648
Tssr128649 14 54870913 to 54870947 34 - TSS region transcription start site region 128649
Tssr128650 14 54875036 to 54875071 35 - TSS region transcription start site region 128650
Ppp1r3e 14 54875597 to 54877538 1941 - protein coding gene protein phosphatase 1, regulatory subunit 3E
Cpgi6476 14 54875924 to 54877870 1946 CpG island CpG island 6476
Tssr128651 14 54877132 to 54877177 45 - TSS region transcription start site region 128651
Tssr128652 14 54877532 to 54877552 20 - TSS region transcription start site region 128652
Tssr125671 14 54883320 to 54883391 71 + TSS region transcription start site region 125671
Bcl2l2 14 54883377 to 54888234 4857 + protein coding gene BCL2-like 2
Tssr125672 14 54883430 to 54883489 59 + TSS region transcription start site region 125672
Gm20521 14 54883441 to 54898137 14696 + protein coding gene predicted gene 20521
Tssr125673 14 54883570 to 54883594 24 + TSS region transcription start site region 125673
Tssr125674 14 54891520 to 54891524 4 + TSS region transcription start site region 125674
Tssr125675 14 54892492 to 54892500 8 + TSS region transcription start site region 125675
Cpgi6477 14 54893596 to 54894869 1273 CpG island CpG island 6477
Tssr128653 14 54893859 to 54893899 40 - TSS region transcription start site region 128653
Tssr4415 14 54893977 to 54893998 21 + TSS region transcription start site region 4415
Tssr4416 14 54894046 to 54894049 3 + TSS region transcription start site region 4416
Tssr125676 14 54894133 to 54894153 20 + TSS region transcription start site region 125676
Pabpn1 14 54894143 to 54898927 4784 + protein coding gene poly(A) binding protein, nuclear 1
Tssr4417 14 54894170 to 54894175 5 + TSS region transcription start site region 4417
Tssr4418 14 54894274 to 54894323 49 + TSS region transcription start site region 4418
Tssr125677 14 54894578 to 54894627 49 + TSS region transcription start site region 125677
Tssr128654 14 54894877 to 54894915 38 - TSS region transcription start site region 128654
Tssr125678 14 54897162 to 54897189 27 + TSS region transcription start site region 125678
Tssr125679 14 54898395 to 54898415 20 + TSS region transcription start site region 125679
Slc22a17 14 54906304 to 54913132 6828 - protein coding gene solute carrier family 22 (organic cation transporter), member 17
Tssr128655 14 54907157 to 54907168 11 - TSS region transcription start site region 128655
Tssr128656 14 54907578 to 54907597 19 - TSS region transcription start site region 128656
Tssr128657 14 54908910 to 54908926 16 - TSS region transcription start site region 128657
Cpgi6478 14 54911959 to 54913306 1347 CpG island CpG island 6478
Tssr128658 14 54912317 to 54912331 14 - TSS region transcription start site region 128658
Tssr128659 14 54912443 to 54912458 15 - TSS region transcription start site region 128659
Tssr128660 14 54913037 to 54913042 5 - TSS region transcription start site region 128660
Tssr128661 14 54913064 to 54913084 20 - TSS region transcription start site region 128661
Tssr128662 14 54913089 to 54913128 39 - TSS region transcription start site region 128662
Efs 14 54916535 to 54926126 9591 - protein coding gene embryonal Fyn-associated substrate
Tssr128663 14 54919834 to 54919865 31 - TSS region transcription start site region 128663
Tssr125680 14 54924823 to 54924839 16 + TSS region transcription start site region 125680
Tssr128664 14 54925581 to 54925599 18 - TSS region transcription start site region 128664
Tssr128665 14 54925608 to 54925633 25 - TSS region transcription start site region 128665
Tssr128666 14 54925639 to 54925684 45 - TSS region transcription start site region 128666
Cpgi6479 14 54925659 to 54927068 1409 CpG island CpG island 6479
Tssr128667 14 54925796 to 54925807 11 - TSS region transcription start site region 128667
Tssr128668 14 54925810 to 54925852 42 - TSS region transcription start site region 128668
Tssr128669 14 54925854 to 54925888 34 - TSS region transcription start site region 128669
Tssr128670 14 54925996 to 54926021 25 - TSS region transcription start site region 128670
Tssr128671 14 54926337 to 54926355 18 - TSS region transcription start site region 128671
Tssr128672 14 54926563 to 54926572 9 - TSS region transcription start site region 128672
Tssr128673 14 54926587 to 54926606 19 - TSS region transcription start site region 128673
Tssr128674 14 54926744 to 54926770 26 - TSS region transcription start site region 128674
Tssr128675 14 54926784 to 54926805 21 - TSS region transcription start site region 128675
Tssr128676 14 54927008 to 54927028 20 - TSS region transcription start site region 128676
Il25 14 54932695 to 54935837 3142 + protein coding gene interleukin 25
Tssr125681 14 54933044 to 54933056 12 + TSS region transcription start site region 125681
Tssr125682 14 54936239 to 54936303 64 + TSS region transcription start site region 125682
Cmtm5 14 54936261 to 54939274 3013 + protein coding gene CKLF-like MARVEL transmembrane domain containing 5
Tssr125683 14 54936456 to 54936478 22 + TSS region transcription start site region 125683
Tssr125684 14 54936480 to 54936534 54 + TSS region transcription start site region 125684
Tssr125685 14 54937739 to 54937749 10 + TSS region transcription start site region 125685
Tssr125686 14 54937755 to 54937785 30 + TSS region transcription start site region 125686
Tssr125687 14 54937819 to 54937828 9 + TSS region transcription start site region 125687
Tssr125688 14 54938431 to 54938437 6 + TSS region transcription start site region 125688
Tssr125689 14 54938470 to 54938479 9 + TSS region transcription start site region 125689
Tssr125690 14 54938482 to 54938493 11 + TSS region transcription start site region 125690
Tssr125691 14 54938579 to 54938585 6 + TSS region transcription start site region 125691
Tssr125692 14 54938608 to 54938615 7 + TSS region transcription start site region 125692
Tssr125693 14 54938622 to 54938637 15 + TSS region transcription start site region 125693
Gm49130 14 54940355 to 54942852 2497 + antisense lncRNA gene predicted gene, 49130
D14Mit268 14 54940840 to 54941133 293 DNA segment DNA Segment, Chr 14, Massachusetts Institute of Technology 268
Myh6 14 54941921 to 54966927 25006 - protein coding gene myosin, heavy polypeptide 6, cardiac muscle, alpha
Tssr125694 14 54944286 to 54944326 40 + TSS region transcription start site region 125694
Tssr128677 14 54944740 to 54944774 34 - TSS region transcription start site region 128677
Tssr128678 14 54946483 to 54946502 19 - TSS region transcription start site region 128678
Tssr128679 14 54946508 to 54946522 14 - TSS region transcription start site region 128679
Tssr128680 14 54946948 to 54946996 48 - TSS region transcription start site region 128680
Tssr128681 14 54947001 to 54947010 9 - TSS region transcription start site region 128681
Tssr128682 14 54947193 to 54947206 13 - TSS region transcription start site region 128682
Tssr125695 14 54948134 to 54948150 16 + TSS region transcription start site region 125695
Tssr125696 14 54948151 to 54948170 19 + TSS region transcription start site region 125696
Tssr128683 14 54948157 to 54948171 14 - TSS region transcription start site region 128683
Tssr128684 14 54948741 to 54948766 25 - TSS region transcription start site region 128684
Mir208a 14 54949060 to 54949142 82 - miRNA gene microRNA 208a