Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:54622161-54706931

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr125663 14 54625305 to 54625317 12 + TSS region transcription start site region 125663
Psmb11 14 54625310 to 54629556 4246 + protein coding gene proteasome (prosome, macropain) subunit, beta type, 11
Cdh24 14 54631992 to 54642067 10075 - protein coding gene cadherin-like 24
Cpgi6468 14 54632069 to 54632612 543 CpG island CpG island 6468
Tssr128611 14 54632284 to 54632289 5 - TSS region transcription start site region 128611
Tssr128612 14 54632303 to 54632314 11 - TSS region transcription start site region 128612
D14Dcr11 14 54634189 to 54634288 99 DNA segment DNA Segment, Chr 14, Derry C. Roopenian 11
Cpgi6469 14 54640773 to 54641912 1139 CpG island CpG island 6469
Gm17606 14 54640952 to 54648293 7341 + protein coding gene predicted gene, 17606
Tssr128613 14 54641323 to 54641343 20 - TSS region transcription start site region 128613
Tssr128614 14 54641347 to 54641374 27 - TSS region transcription start site region 128614
Acin1 14 54642161 to 54686931 44770 - protein coding gene apoptotic chromatin condensation inducer 1
Mir6948 14 54643049 to 54643110 61 - miRNA gene microRNA 6948
4930579G18Rik 14 54650511 to 54654607 4096 + antisense lncRNA gene RIKEN cDNA 4930579G18 gene
Cpgi6470 14 54653489 to 54653652 163 CpG island CpG island 6470
Tssr128615 14 54653662 to 54653701 39 - TSS region transcription start site region 128615
Tssr128616 14 54653732 to 54653743 11 - TSS region transcription start site region 128616
Tssr128617 14 54654219 to 54654222 3 - TSS region transcription start site region 128617
Gm8776 14 54681098 to 54681726 628 + pseudogene predicted gene 8776
Tssr125664 14 54681099 to 54681100 1 + TSS region transcription start site region 125664
Cpgi6471 14 54686011 to 54687060 1049 CpG island CpG island 6471
Tssr128618 14 54686132 to 54686167 35 - TSS region transcription start site region 128618
Tssr128619 14 54686169 to 54686198 29 - TSS region transcription start site region 128619
Tssr4413 14 54686170 to 54686184 14 + TSS region transcription start site region 4413
Tssr125665 14 54686201 to 54686230 29 + TSS region transcription start site region 125665
1700123O20Rik 14 54686216 to 54690741 4525 + protein coding gene RIKEN cDNA 1700123O20 gene
Tssr125666 14 54686242 to 54686261 19 + TSS region transcription start site region 125666
Tssr128620 14 54686272 to 54686283 11 - TSS region transcription start site region 128620
Tssr125667 14 54686373 to 54686398 25 + TSS region transcription start site region 125667
Tssr128621 14 54686605 to 54686647 42 - TSS region transcription start site region 128621
Tssr128622 14 54686926 to 54686970 44 - TSS region transcription start site region 128622
Tssr125668 14 54686982 to 54687063 81 + TSS region transcription start site region 125668
Gm29776 14 54692598 to 54698833 6235 - protein coding gene predicted gene, 29776