Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:54417170-54617702

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94 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc7a7 14 54369442 to 54417702 48260 - protein coding gene solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
Cpgi6454 14 54417426 to 54417671 245 CpG island CpG island 6454
Tssr128583 14 54417626 to 54417648 22 - TSS region transcription start site region 128583
Tssr128584 14 54417739 to 54417750 11 - TSS region transcription start site region 128584
Tssr128585 14 54417781 to 54417810 29 - TSS region transcription start site region 128585
Tssr128586 14 54417813 to 54417835 22 - TSS region transcription start site region 128586
Tssr128587 14 54417839 to 54417865 26 - TSS region transcription start site region 128587
Cpgi6455 14 54426612 to 54427234 622 CpG island CpG island 6455
Tssr125630 14 54426902 to 54426930 28 + TSS region transcription start site region 125630
Mrpl52 14 54426909 to 54429750 2841 + protein coding gene mitochondrial ribosomal protein L52
Tssr125631 14 54427141 to 54427163 22 + TSS region transcription start site region 125631
Tssr125632 14 54428577 to 54428615 38 + TSS region transcription start site region 125632
Tssr125633 14 54431461 to 54431471 10 + TSS region transcription start site region 125633
Cpgi6456 14 54431538 to 54432817 1279 CpG island CpG island 6456
Tssr125634 14 54431597 to 54431673 76 + TSS region transcription start site region 125634
Mmp14 14 54431598 to 54442456 10858 + protein coding gene matrix metallopeptidase 14 (membrane-inserted)
Tssr125635 14 54431696 to 54431707 11 + TSS region transcription start site region 125635
Tssr125636 14 54436200 to 54436218 18 + TSS region transcription start site region 125636
Tssr125637 14 54436859 to 54436887 28 + TSS region transcription start site region 125637
Tssr125638 14 54437760 to 54437771 11 + TSS region transcription start site region 125638
Tssr128588 14 54438729 to 54438745 16 - TSS region transcription start site region 128588
Tssr125639 14 54439896 to 54439908 12 + TSS region transcription start site region 125639
Tssr125640 14 54440665 to 54440681 16 + TSS region transcription start site region 125640
Tssr125641 14 54440741 to 54440756 15 + TSS region transcription start site region 125641
Tssr125642 14 54440765 to 54440778 13 + TSS region transcription start site region 125642
Tssr125643 14 54440805 to 54440818 13 + TSS region transcription start site region 125643
Tssr125644 14 54440894 to 54440905 11 + TSS region transcription start site region 125644
Tssr125645 14 54440993 to 54441010 17 + TSS region transcription start site region 125645
Tssr125646 14 54441056 to 54441115 59 + TSS region transcription start site region 125646
Tssr125647 14 54441156 to 54441191 35 + TSS region transcription start site region 125647
Tssr125648 14 54442169 to 54442180 11 + TSS region transcription start site region 125648
Tssr125649 14 54442322 to 54442338 16 + TSS region transcription start site region 125649
5430430K15Rik 14 54446318 to 54447861 1543 + unclassified gene RIKEN cDNA 5430430K15 gene
Cpgi6457 14 54449166 to 54449544 378 CpG island CpG island 6457
Gm24424 14 54449958 to 54450064 106 - snRNA gene predicted gene, 24424
Tssr128589 14 54462796 to 54462799 3 - TSS region transcription start site region 128589
Gm10366 14 54463042 to 54464742 1700 - antisense lncRNA gene predicted gene 10366
Cpgi6458 14 54463865 to 54464965 1100 CpG island CpG island 6458
Tssr125650 14 54463898 to 54463912 14 + TSS region transcription start site region 125650
Tssr4410 14 54463915 to 54463926 11 + TSS region transcription start site region 4410
Tssr4411 14 54464030 to 54464050 20 - TSS region transcription start site region 4411
Tssr128590 14 54464053 to 54464067 14 - TSS region transcription start site region 128590
Tssr128591 14 54464069 to 54464083 14 - TSS region transcription start site region 128591
Tssr125651 14 54464141 to 54464222 81 + TSS region transcription start site region 125651
Lrp10 14 54464147 to 54470292 6145 + protein coding gene low-density lipoprotein receptor-related protein 10
Tssr125652 14 54464480 to 54464515 35 + TSS region transcription start site region 125652
Tssr125653 14 54467485 to 54467519 34 + TSS region transcription start site region 125653
Tssr125654 14 54467600 to 54467611 11 + TSS region transcription start site region 125654
Tssr125655 14 54467957 to 54467977 20 + TSS region transcription start site region 125655
Tssr125656 14 54468114 to 54468127 13 + TSS region transcription start site region 125656
Tssr125657 14 54469328 to 54469351 23 + TSS region transcription start site region 125657
Rem2 14 54476100 to 54480431 4331 + protein coding gene rad and gem related GTP binding protein 2
Tssr125658 14 54476183 to 54476190 7 + TSS region transcription start site region 125658
Cpgi6459 14 54476189 to 54476484 295 CpG island CpG island 6459
Tssr125659 14 54476212 to 54476228 16 + TSS region transcription start site region 125659
Tssr4412 14 54476246 to 54476259 13 + TSS region transcription start site region 4412
Cpgi6460 14 54479221 to 54479894 673 CpG island CpG island 6460
Gm41153 14 54492313 to 54492913 600 - lncRNA gene predicted gene, 41153
Prmt5 14 54507182 to 54517470 10288 - protein coding gene protein arginine N-methyltransferase 5
Cpgi6461 14 54517170 to 54517702 532 CpG island CpG island 6461
Tssr128592 14 54517353 to 54517401 48 - TSS region transcription start site region 128592
n-TRacg6 14 54517696 to 54517768 72 + tRNA gene nuclear encoded tRNA arginine 6 (anticodon ACG)
Haus4 14 54541785 to 54554361 12576 - protein coding gene HAUS augmin-like complex, subunit 4
Tssr125660 14 54549550 to 54549598 48 + TSS region transcription start site region 125660
Tssr128593 14 54550036 to 54550040 4 - TSS region transcription start site region 128593
Cpgi6462 14 54553481 to 54554978 1497 CpG island CpG island 6462
Tssr125661 14 54554044 to 54554061 17 + TSS region transcription start site region 125661
Tssr128594 14 54554268 to 54554279 11 - TSS region transcription start site region 128594
Tssr128595 14 54554289 to 54554358 69 - TSS region transcription start site region 128595
Tssr128596 14 54554359 to 54554370 11 - TSS region transcription start site region 128596
Tssr128597 14 54554379 to 54554398 19 - TSS region transcription start site region 128597
Tssr128598 14 54554406 to 54554413 7 - TSS region transcription start site region 128598
Ajuba 14 54567472 to 54577558 10086 - protein coding gene ajuba LIM protein
Tssr128599 14 54568214 to 54568257 43 - TSS region transcription start site region 128599
Tssr128600 14 54572851 to 54572864 13 - TSS region transcription start site region 128600
Cpgi6463 14 54575365 to 54577746 2381 CpG island CpG island 6463
Tssr128601 14 54575666 to 54575708 42 - TSS region transcription start site region 128601
Tssr128602 14 54577480 to 54577498 18 - TSS region transcription start site region 128602
Tssr128603 14 54577527 to 54577539 12 - TSS region transcription start site region 128603
Tssr128604 14 54577543 to 54577558 15 - TSS region transcription start site region 128604
Tssr128605 14 54577561 to 54577577 16 - TSS region transcription start site region 128605
Tssr128606 14 54577578 to 54577612 34 - TSS region transcription start site region 128606
Gm24705 14 54581177 to 54581283 106 + snRNA gene predicted gene, 24705
4931414P19Rik 14 54583663 to 54605993 22330 - protein coding gene RIKEN cDNA 4931414P19 gene
Cpgi6464 14 54595111 to 54595430 319 CpG island CpG island 6464
Cpgi6465 14 54603125 to 54603817 692 CpG island CpG island 6465
Tssr128607 14 54603355 to 54603371 16 - TSS region transcription start site region 128607
Tssr128608 14 54603376 to 54603400 24 - TSS region transcription start site region 128608
Tssr125662 14 54603585 to 54603618 33 + TSS region transcription start site region 125662
Tssr128609 14 54605909 to 54605935 26 - TSS region transcription start site region 128609
Cpgi6466 14 54605918 to 54606328 410 CpG island CpG island 6466
Psmb5 14 54614120 to 54617995 3875 - protein coding gene proteasome (prosome, macropain) subunit, beta type 5
Mir686 14 54616677 to 54616785 108 - miRNA gene microRNA 686
Cpgi6467 14 54617423 to 54618162 739 CpG island CpG island 6467