Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:54333898-54593912

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116 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm3945 14 54334217 to 54334899 682 + pseudogene predicted gene 3945
5330426L24Rik 14 54349462 to 54351636 2174 - lincRNA gene RIKEN cDNA 5330426L24 gene
Cpgi6453 14 54360712 to 54361534 822 CpG island CpG island 6453
Tssr125623 14 54360826 to 54360851 25 + TSS region transcription start site region 125623
Oxa1l 14 54360841 to 54369669 8828 + protein coding gene oxidase assembly 1-like
Tssr125624 14 54361030 to 54361135 105 + TSS region transcription start site region 125624
Tssr125625 14 54361292 to 54361349 57 + TSS region transcription start site region 125625
Tssr125626 14 54363400 to 54363426 26 + TSS region transcription start site region 125626
Tssr125627 14 54367863 to 54367886 23 + TSS region transcription start site region 125627
Tssr125628 14 54368361 to 54368379 18 + TSS region transcription start site region 125628
Slc7a7 14 54369442 to 54417702 48260 - protein coding gene solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
Tssr128562 14 54384165 to 54384192 27 - TSS region transcription start site region 128562
Tssr128563 14 54397675 to 54397679 4 - TSS region transcription start site region 128563
Tssr128564 14 54398024 to 54398066 42 - TSS region transcription start site region 128564
Tssr128565 14 54398634 to 54398648 14 - TSS region transcription start site region 128565
Tssr128566 14 54409300 to 54409308 8 - TSS region transcription start site region 128566
Tssr128567 14 54409370 to 54409418 48 - TSS region transcription start site region 128567
Tssr128568 14 54409422 to 54409434 12 - TSS region transcription start site region 128568
Tssr128569 14 54409469 to 54409477 8 - TSS region transcription start site region 128569
Tssr128570 14 54409967 to 54409984 17 - TSS region transcription start site region 128570
Tssr128571 14 54410011 to 54410026 15 - TSS region transcription start site region 128571
Tssr128572 14 54410110 to 54410117 7 - TSS region transcription start site region 128572
Tssr128573 14 54410123 to 54410141 18 - TSS region transcription start site region 128573
Tssr128574 14 54410164 to 54410179 15 - TSS region transcription start site region 128574
Tssr128575 14 54410190 to 54410218 28 - TSS region transcription start site region 128575
Tssr128576 14 54410251 to 54410262 11 - TSS region transcription start site region 128576
Tssr128577 14 54410273 to 54410283 10 - TSS region transcription start site region 128577
Tssr128578 14 54410652 to 54410674 22 - TSS region transcription start site region 128578
Tssr128579 14 54413898 to 54413913 15 - TSS region transcription start site region 128579
Tssr128580 14 54413915 to 54413937 22 - TSS region transcription start site region 128580
Tssr128581 14 54413987 to 54414084 97 - TSS region transcription start site region 128581
Tssr125629 14 54414104 to 54414127 23 + TSS region transcription start site region 125629
Tssr128582 14 54416998 to 54417006 8 - TSS region transcription start site region 128582
Cpgi6454 14 54417426 to 54417671 245 CpG island CpG island 6454
Tssr128583 14 54417626 to 54417648 22 - TSS region transcription start site region 128583
Tssr128584 14 54417739 to 54417750 11 - TSS region transcription start site region 128584
Tssr128585 14 54417781 to 54417810 29 - TSS region transcription start site region 128585
Tssr128586 14 54417813 to 54417835 22 - TSS region transcription start site region 128586
Tssr128587 14 54417839 to 54417865 26 - TSS region transcription start site region 128587
Cpgi6455 14 54426612 to 54427234 622 CpG island CpG island 6455
Tssr125630 14 54426902 to 54426930 28 + TSS region transcription start site region 125630
Mrpl52 14 54426909 to 54429750 2841 + protein coding gene mitochondrial ribosomal protein L52
Tssr125631 14 54427141 to 54427163 22 + TSS region transcription start site region 125631
Tssr125632 14 54428577 to 54428615 38 + TSS region transcription start site region 125632
Tssr125633 14 54431461 to 54431471 10 + TSS region transcription start site region 125633
Cpgi6456 14 54431538 to 54432817 1279 CpG island CpG island 6456
Tssr125634 14 54431597 to 54431673 76 + TSS region transcription start site region 125634
Mmp14 14 54431598 to 54442456 10858 + protein coding gene matrix metallopeptidase 14 (membrane-inserted)
Tssr125635 14 54431696 to 54431707 11 + TSS region transcription start site region 125635
Tssr125636 14 54436200 to 54436218 18 + TSS region transcription start site region 125636
Tssr125637 14 54436859 to 54436887 28 + TSS region transcription start site region 125637
Tssr125638 14 54437760 to 54437771 11 + TSS region transcription start site region 125638
Tssr128588 14 54438729 to 54438745 16 - TSS region transcription start site region 128588
Tssr125639 14 54439896 to 54439908 12 + TSS region transcription start site region 125639
Tssr125640 14 54440665 to 54440681 16 + TSS region transcription start site region 125640
Tssr125641 14 54440741 to 54440756 15 + TSS region transcription start site region 125641
Tssr125642 14 54440765 to 54440778 13 + TSS region transcription start site region 125642
Tssr125643 14 54440805 to 54440818 13 + TSS region transcription start site region 125643
Tssr125644 14 54440894 to 54440905 11 + TSS region transcription start site region 125644
Tssr125645 14 54440993 to 54441010 17 + TSS region transcription start site region 125645
Tssr125646 14 54441056 to 54441115 59 + TSS region transcription start site region 125646
Tssr125647 14 54441156 to 54441191 35 + TSS region transcription start site region 125647
Tssr125648 14 54442169 to 54442180 11 + TSS region transcription start site region 125648
Tssr125649 14 54442322 to 54442338 16 + TSS region transcription start site region 125649
5430430K15Rik 14 54446318 to 54447861 1543 + unclassified gene RIKEN cDNA 5430430K15 gene
Cpgi6457 14 54449166 to 54449544 378 CpG island CpG island 6457
Gm24424 14 54449958 to 54450064 106 - snRNA gene predicted gene, 24424
Tssr128589 14 54462796 to 54462799 3 - TSS region transcription start site region 128589
Gm10366 14 54463042 to 54464742 1700 - antisense lncRNA gene predicted gene 10366
Cpgi6458 14 54463865 to 54464965 1100 CpG island CpG island 6458
Tssr125650 14 54463898 to 54463912 14 + TSS region transcription start site region 125650
Tssr4410 14 54463915 to 54463926 11 + TSS region transcription start site region 4410
Tssr4411 14 54464030 to 54464050 20 - TSS region transcription start site region 4411
Tssr128590 14 54464053 to 54464067 14 - TSS region transcription start site region 128590
Tssr128591 14 54464069 to 54464083 14 - TSS region transcription start site region 128591
Tssr125651 14 54464141 to 54464222 81 + TSS region transcription start site region 125651
Lrp10 14 54464147 to 54470292 6145 + protein coding gene low-density lipoprotein receptor-related protein 10
Tssr125652 14 54464480 to 54464515 35 + TSS region transcription start site region 125652
Tssr125653 14 54467485 to 54467519 34 + TSS region transcription start site region 125653
Tssr125654 14 54467600 to 54467611 11 + TSS region transcription start site region 125654
Tssr125655 14 54467957 to 54467977 20 + TSS region transcription start site region 125655
Tssr125656 14 54468114 to 54468127 13 + TSS region transcription start site region 125656
Tssr125657 14 54469328 to 54469351 23 + TSS region transcription start site region 125657
Rem2 14 54476100 to 54480431 4331 + protein coding gene rad and gem related GTP binding protein 2
Tssr125658 14 54476183 to 54476190 7 + TSS region transcription start site region 125658
Cpgi6459 14 54476189 to 54476484 295 CpG island CpG island 6459
Tssr125659 14 54476212 to 54476228 16 + TSS region transcription start site region 125659
Tssr4412 14 54476246 to 54476259 13 + TSS region transcription start site region 4412
Cpgi6460 14 54479221 to 54479894 673 CpG island CpG island 6460
Gm41153 14 54492313 to 54492913 600 - lncRNA gene predicted gene, 41153
Prmt5 14 54507182 to 54517470 10288 - protein coding gene protein arginine N-methyltransferase 5
Cpgi6461 14 54517170 to 54517702 532 CpG island CpG island 6461
Tssr128592 14 54517353 to 54517401 48 - TSS region transcription start site region 128592
n-TRacg6 14 54517696 to 54517768 72 + tRNA gene nuclear encoded tRNA arginine 6 (anticodon ACG)
Haus4 14 54541785 to 54554361 12576 - protein coding gene HAUS augmin-like complex, subunit 4
Tssr125660 14 54549550 to 54549598 48 + TSS region transcription start site region 125660
Tssr128593 14 54550036 to 54550040 4 - TSS region transcription start site region 128593
Cpgi6462 14 54553481 to 54554978 1497 CpG island CpG island 6462
Tssr125661 14 54554044 to 54554061 17 + TSS region transcription start site region 125661
Tssr128594 14 54554268 to 54554279 11 - TSS region transcription start site region 128594
Tssr128595 14 54554289 to 54554358 69 - TSS region transcription start site region 128595
Tssr128596 14 54554359 to 54554370 11 - TSS region transcription start site region 128596
Tssr128597 14 54554379 to 54554398 19 - TSS region transcription start site region 128597
Tssr128598 14 54554406 to 54554413 7 - TSS region transcription start site region 128598
Ajuba 14 54567472 to 54577558 10086 - protein coding gene ajuba LIM protein
Tssr128599 14 54568214 to 54568257 43 - TSS region transcription start site region 128599
Tssr128600 14 54572851 to 54572864 13 - TSS region transcription start site region 128600
Cpgi6463 14 54575365 to 54577746 2381 CpG island CpG island 6463
Tssr128601 14 54575666 to 54575708 42 - TSS region transcription start site region 128601
Tssr128602 14 54577480 to 54577498 18 - TSS region transcription start site region 128602
Tssr128603 14 54577527 to 54577539 12 - TSS region transcription start site region 128603
Tssr128604 14 54577543 to 54577558 15 - TSS region transcription start site region 128604
Tssr128605 14 54577561 to 54577577 16 - TSS region transcription start site region 128605
Tssr128606 14 54577578 to 54577612 34 - TSS region transcription start site region 128606
Gm24705 14 54581177 to 54581283 106 + snRNA gene predicted gene, 24705
4931414P19Rik 14 54583663 to 54605993 22330 - protein coding gene RIKEN cDNA 4931414P19 gene