Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:54172402-54192464

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46 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Traj45 14 54172831 to 54172890 59 + gene segment T cell receptor alpha joining 45
Tssr125558 14 54173527 to 54173534 7 + TSS region transcription start site region 125558
Tssr125559 14 54173538 to 54173554 16 + TSS region transcription start site region 125559
Tssr125560 14 54173558 to 54173590 32 + TSS region transcription start site region 125560
Tssr125561 14 54173597 to 54173604 7 + TSS region transcription start site region 125561
Traj44 14 54173690 to 54173750 60 + gene segment T cell receptor alpha joining 44
Tssr125562 14 54174398 to 54174401 3 + TSS region transcription start site region 125562
Tssr125563 14 54174600 to 54174626 26 + TSS region transcription start site region 125563
Traj43 14 54174742 to 54174798 56 + gene segment T cell receptor alpha joining 43
Tssr125564 14 54174865 to 54174879 14 + TSS region transcription start site region 125564
Tssr125565 14 54174954 to 54174968 14 + TSS region transcription start site region 125565
Traj42 14 54175773 to 54175836 63 + gene segment T cell receptor alpha joining 42
Tssr125566 14 54175974 to 54175982 8 + TSS region transcription start site region 125566
Tssr125567 14 54176208 to 54176219 11 + TSS region transcription start site region 125567
Tssr125568 14 54176227 to 54176236 9 + TSS region transcription start site region 125568
Tssr125569 14 54176253 to 54176256 3 + TSS region transcription start site region 125569
Tssr125570 14 54176271 to 54176285 14 + TSS region transcription start site region 125570
Traj41 14 54176271 to 54176325 54 + gene segment T cell receptor alpha joining 41
Tssr128543 14 54176657 to 54176662 5 - TSS region transcription start site region 128543
Traj40 14 54177921 to 54177981 60 + gene segment T cell receptor alpha joining 40
Tssr125571 14 54179524 to 54179530 6 + TSS region transcription start site region 125571
Tssr125572 14 54179647 to 54179660 13 + TSS region transcription start site region 125572
Tssr125573 14 54179712 to 54179722 10 + TSS region transcription start site region 125573
Traj39 14 54179962 to 54180024 62 + gene segment T cell receptor alpha joining 39
Traj38 14 54180574 to 54180635 61 + gene segment T cell receptor alpha joining 38
Tssr128544 14 54181230 to 54181249 19 - TSS region transcription start site region 128544
Tssr125574 14 54181421 to 54181438 17 + TSS region transcription start site region 125574
Tssr125575 14 54181484 to 54181511 27 + TSS region transcription start site region 125575
Tssr125576 14 54181516 to 54181548 32 + TSS region transcription start site region 125576
Traj37 14 54181518 to 54181577 59 + gene segment T cell receptor alpha joining 37
Tssr125577 14 54181560 to 54181567 7 + TSS region transcription start site region 125577
Tssr125578 14 54181630 to 54181633 3 + TSS region transcription start site region 125578
Traj36 14 54182402 to 54182464 62 + pseudogenic gene segment T cell receptor alpha joining 36
Traj35 14 54183774 to 54183838 64 + gene segment T cell receptor alpha joining 35
Traj34 14 54184699 to 54184756 57 + gene segment T cell receptor alpha joining 34
Traj33 14 54185358 to 54185414 56 + gene segment T cell receptor alpha joining 33
Tssr125579 14 54185846 to 54185851 5 + TSS region transcription start site region 125579
Tssr125580 14 54185990 to 54186004 14 + TSS region transcription start site region 125580
Traj32 14 54186101 to 54186166 65 + gene segment T cell receptor alpha joining 32
Traj31 14 54187895 to 54187951 56 + gene segment T cell receptor alpha joining 31
Traj30 14 54189866 to 54189924 58 + gene segment T cell receptor alpha joining 30
Traj29 14 54190946 to 54191005 59 + gene segment T cell receptor alpha joining 29
Traj28 14 54191661 to 54191725 64 + gene segment T cell receptor alpha joining 28
Tssr125581 14 54192256 to 54192287 31 + TSS region transcription start site region 125581
Tssr125582 14 54192301 to 54192315 14 + TSS region transcription start site region 125582
Traj27 14 54192303 to 54192361 58 + gene segment T cell receptor alpha joining 27