Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:53740797-53860813

Filter by:
20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Trav16 14 53743174 to 53743705 531 + gene segment T cell receptor alpha variable 16
Trav13-4-dv7 14 53757410 to 53757921 511 + gene segment T cell receptor alpha variable 13-4-DV7
Tssr125496 14 53763137 to 53763185 48 + TSS region transcription start site region 125496
Trav14-3 14 53763196 to 53763694 498 + gene segment T cell receptor alpha variable 14-3
Trav15-3 14 53767026 to 53767180 154 + pseudogenic gene segment T cell receptor alpha variable 15-3
Tssr125497 14 53776930 to 53776957 27 + TSS region transcription start site region 125497
Trav3-4 14 53777071 to 53777576 505 + gene segment T cell receptor alpha variable 3-4
Trav12-4 14 53778603 to 53778845 242 + pseudogenic gene segment T cell receptor alpha variable 12-4
B230359F08Rik 14 53795455 to 53795963 508 + protein coding gene RIKEN cDNA B230359F08 gene
Tssr125498 14 53800705 to 53800713 8 + TSS region transcription start site region 125498
Tssr125499 14 53800797 to 53800813 16 + TSS region transcription start site region 125499
Tssr125500 14 53800815 to 53800834 19 + TSS region transcription start site region 125500
Tssr125501 14 53806463 to 53806472 9 + TSS region transcription start site region 125501
Tssr125502 14 53806497 to 53806520 23 + TSS region transcription start site region 125502
Trav17 14 53806639 to 53807115 476 + gene segment T cell receptor alpha variable 17
Trav18 14 53831105 to 53831827 722 + gene segment T cell receptor alpha variable 18
Tssr125503 14 53845263 to 53845276 13 + TSS region transcription start site region 125503
Tssr125504 14 53845307 to 53845321 14 + TSS region transcription start site region 125504
Trav19 14 53845322 to 53845827 505 + gene segment T cell receptor alpha variable 19
Tssr128529 14 53845830 to 53845844 14 - TSS region transcription start site region 128529