Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:53554945-53675224

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20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Trav15-1-dv6-1 14 53559676 to 53560247 571 + gene segment T cell receptor alpha variable 15-1-DV6-1
Trav3-2 14 53586500 to 53586964 464 + pseudogenic gene segment T cell receptor alpha variable 3-2
Tssr125487 14 53590901 to 53590908 7 + TSS region transcription start site region 125487
Trav9-2 14 53591080 to 53591504 424 + gene segment T cell receptor alpha variable 9-2
Tssr125488 14 53598825 to 53598855 30 + TSS region transcription start site region 125488
Trav4-3 14 53598911 to 53599410 499 + gene segment T cell receptor alpha variable 4-3
Trav5-2 14 53614945 to 53615224 279 + pseudogenic gene segment T cell receptor alpha variable 5-2
Trav12-2 14 53616397 to 53616914 517 + gene segment T cell receptor alpha variable 12-2
D14Mit19 14 53616494 to 53616643 149 DNA segment DNA segment, Chr 14, Massachusetts Institute of Technology 19
Tssr125489 14 53621732 to 53621744 12 + TSS region transcription start site region 125489
Trav12-3 14 53621752 to 53622245 493 + gene segment T cell receptor alpha variable 12-3
Tssr125490 14 53634821 to 53634831 10 + TSS region transcription start site region 125490
Trav13-2 14 53634888 to 53635399 511 + gene segment T cell receptor alpha variable 13-2
Trav14-2 14 53640775 to 53641225 450 + gene segment T cell receptor alpha variable 14-2
Tssr125491 14 53644181 to 53644186 5 + TSS region transcription start site region 125491
Trav15-2-dv6-2 14 53649425 to 53649994 569 + gene segment T cell receptor alpha variable 15-2-DV6-2
Gm17792 14 53662785 to 53663829 1044 + pseudogene predicted gene, 17792
Gm43551 14 53663341 to 53663780 439 - pseudogene predicted gene 43551
Tssr125492 14 53665912 to 53665946 34 + TSS region transcription start site region 125492
Trav3-3 14 53666005 to 53666506 501 + gene segment T cell receptor alpha variable 3-3