MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 14:53488266-53588738

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Trav9-1	14	53488106 to 53488567	461	+	gene segment	T cell receptor alpha variable 9-1
Trav6-5	14	53491152 to 53491622	470	+	gene segment	T cell receptor alpha variable 6-5
Trav10	14	53505790 to 53506286	496	+	gene segment	T cell receptor alpha variable 10
Trav6-6	14	53516929 to 53517366	437	+	gene segment	T cell receptor alpha variable 6-6
Trav11	14	53519303 to 53519859	556	+	gene segment	T cell receptor alpha variable 11
Tssr125481	14	53530746 to 53530764	18	+	TSS region	transcription start site region 125481
Trav7-5	14	53530786 to 53531313	527	+	gene segment	T cell receptor alpha variable 7-5
Tssr125482	14	53538246 to 53538258	12	+	TSS region	transcription start site region 125482
Trav12-1	14	53538266 to 53538738	472	+	gene segment	T cell receptor alpha variable 12-1
Tssr125483	14	53544882 to 53544917	35	+	TSS region	transcription start site region 125483
Tssr125484	14	53544975 to 53544990	15	+	TSS region	transcription start site region 125484
Trav13-1	14	53545014 to 53545525	511	+	gene segment	T cell receptor alpha variable 13-1
Tssr125485	14	53553987 to 53554003	16	+	TSS region	transcription start site region 125485
Tssr125486	14	53554043 to 53554046	3	+	TSS region	transcription start site region 125486
Trav14-1	14	53554057 to 53554558	501	+	gene segment	T cell receptor alpha variable 14-1
Trav15-1-dv6-1	14	53559676 to 53560247	571	+	gene segment	T cell receptor alpha variable 15-1-DV6-1
Trav3-2	14	53586500 to 53586964	464	+	pseudogenic gene segment	T cell receptor alpha variable 3-2