Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 14:52309889-52510927

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sall2 14 52311177 to 52328670 17493 - protein coding gene spalt like transcription factor 2
Cpgi6446 14 52314401 to 52314598 197 CpG island CpG island 6446
Tssr128517 14 52314775 to 52314784 9 - TSS region transcription start site region 128517
Cpgi6447 14 52315562 to 52316383 821 CpG island CpG island 6447
Tssr128518 14 52316113 to 52316142 29 - TSS region transcription start site region 128518
Tssr128519 14 52316156 to 52316167 11 - TSS region transcription start site region 128519
Tssr128520 14 52316185 to 52316199 14 - TSS region transcription start site region 128520
Tssr128521 14 52316201 to 52316253 52 - TSS region transcription start site region 128521
Tssr128522 14 52316307 to 52316324 17 - TSS region transcription start site region 128522
Tssr128523 14 52316333 to 52316344 11 - TSS region transcription start site region 128523
Tssr128524 14 52316374 to 52316382 8 - TSS region transcription start site region 128524
Cpgi6448 14 52328090 to 52328351 261 CpG island CpG island 6448
Tssr125460 14 52328107 to 52328112 5 + TSS region transcription start site region 125460
Tssr128525 14 52328358 to 52328370 12 - TSS region transcription start site region 128525
Tssr128526 14 52328449 to 52328473 24 - TSS region transcription start site region 128526
Gm26328 14 52342777 to 52342883 106 + snRNA gene predicted gene, 26328
Olfr1513 14 52349103 to 52350044 941 - protein coding gene olfactory receptor 1513
Gm4742 14 52368918 to 52369688 770 - pseudogene predicted gene 4742
Tssr128527 14 52369685 to 52369731 46 - TSS region transcription start site region 128527
Olfr1512 14 52372110 to 52373051 941 - protein coding gene olfactory receptor 1512
Gm37504 14 52373153 to 52375526 2373 - unclassified gene predicted gene, 37504
Olfr1511 14 52389815 to 52390771 956 - protein coding gene olfactory receptor 1511
Gm41151 14 52393269 to 52420501 27232 + lncRNA gene predicted gene, 41151
Olfr1510 14 52409889 to 52410927 1038 - protein coding gene olfactory receptor 1510
Tssr128528 14 52417306 to 52417307 1 - TSS region transcription start site region 128528
Gm43250 14 52420556 to 52420828 272 + pseudogene predicted gene 43250
Tssr125461 14 52427931 to 52427952 21 + TSS region transcription start site region 125461
Tcra 14 52427967 to 54224198 1796231 + complex/cluster/region T cell receptor alpha chain
Trav1 14 52427967 to 52428876 909 + gene segment T cell receptor alpha variable 1
Tssr125462 14 52437078 to 52437087 9 + TSS region transcription start site region 125462
Tssr125463 14 52437107 to 52437116 9 + TSS region transcription start site region 125463
Olfr1509 14 52450393 to 52451402 1009 + protein coding gene olfactory receptor 1509
Olfr1508 14 52462721 to 52467461 4740 - protein coding gene olfactory receptor 1508
Gm43512 14 52482885 to 52483060 175 - pseudogene predicted gene 43512
Olfr1507 14 52489935 to 52495695 5760 - protein coding gene olfactory receptor 1507
Gm9537 14 52508286 to 52518788 10502 + pseudogene predicted gene 9537
Gm36382 14 52508542 to 52509082 540 - pseudogene predicted gene, 36382