Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 14:52110419-52247239

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32 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rpgrip1 14 52110704 to 52163546 52842 + protein coding gene retinitis pigmentosa GTPase regulator interacting protein 1
Tssr125448 14 52110910 to 52110932 22 + TSS region transcription start site region 125448
Tssr125449 14 52110939 to 52110953 14 + TSS region transcription start site region 125449
Cpgi6440 14 52119061 to 52119572 511 CpG island CpG island 6440
Tssr125450 14 52136463 to 52136475 12 + TSS region transcription start site region 125450
Tssr125451 14 52136477 to 52136507 30 + TSS region transcription start site region 125451
Tssr125452 14 52136526 to 52136540 14 + TSS region transcription start site region 125452
Tssr125453 14 52136556 to 52136581 25 + TSS region transcription start site region 125453
Tssr125454 14 52140987 to 52141008 21 + TSS region transcription start site region 125454
Tssr125455 14 52141046 to 52141066 20 + TSS region transcription start site region 125455
Gm18976 14 52143574 to 52144142 568 - pseudogene predicted gene, 18976
Supt16 14 52160419 to 52197239 36820 - protein coding gene SPT16, facilitates chromatin remodeling subunit
Tssr128495 14 52160925 to 52160929 4 - TSS region transcription start site region 128495
Tssr128496 14 52175281 to 52175285 4 - TSS region transcription start site region 128496
D14Mit233 14 52175947 to 52176146 199 DNA segment DNA Segment, Chr 14, Massachusetts Institute of Technology 233
D14Dcr2 14 52176043 to 52176140 97 DNA segment DNA Segment, Chr 14, Derry C. Roopenian 2
Tssr128497 14 52180172 to 52180189 17 - TSS region transcription start site region 128497
Tssr128498 14 52180214 to 52180237 23 - TSS region transcription start site region 128498
Tssr128499 14 52180239 to 52180252 13 - TSS region transcription start site region 128499
Cpgi6441 14 52196521 to 52197724 1203 CpG island CpG island 6441
Tssr128500 14 52197150 to 52197173 23 - TSS region transcription start site region 128500
Tssr128501 14 52197182 to 52197207 25 - TSS region transcription start site region 128501
Tssr128502 14 52197216 to 52197267 51 - TSS region transcription start site region 128502
Tssr128503 14 52197405 to 52197465 60 - TSS region transcription start site region 128503
Tssr125456 14 52197511 to 52197518 7 + TSS region transcription start site region 125456
Chd8 14 52198151 to 52257780 59629 - protein coding gene chromodomain helicase DNA binding protein 8
Gm26590 14 52204909 to 52213856 8947 + lncRNA gene predicted gene, 26590
Snord8 14 52209786 to 52209884 98 - snoRNA gene small nucleolar RNA, C/D box 8
Tssr128504 14 52235284 to 52235295 11 - TSS region transcription start site region 128504
Tssr128505 14 52237770 to 52237792 22 - TSS region transcription start site region 128505
Cpgi6442 14 52244158 to 52244747 589 CpG island CpG island 6442
Tssr128506 14 52244451 to 52244523 72 - TSS region transcription start site region 128506